Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for BRCC3

Gene Name Gene ID Reads Annotation
BRCC3 ENSDARG00000098242 1123 BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]










Genes with expression patterns similar to BRCC3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. BRCC3 ENSDARG00000098242 1123 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
2. imp4 ENSDARG00000054540 1396 2.476 - - - - - 0.998 0.732 0.746 - IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-474]
3. si:ch211-160e1.5 5586 1.969 - 0.978 - - - 0.991 - - - si:ch211-160e1.5
4. wdr5 ENSDARG00000016903 4834 1.964 - 0.972 - - - 0.992 - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
5. PSIP1 PSIP1 5252 1.956 - 0.963 - - - 0.993 - - -
6. pdlim5b ENSDARG00000027600 4252 1.943 - 0.951 - - - 0.992 - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
7. snrpc ENSDARG00000009871 9567 1.885 - 0.915 - - - 0.970 - - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
8. padi2 ENSDARG00000044167 6765 1.882 - 0.958 - - - 0.924 - - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
9. tmem134 ENSDARG00000024828 3241 1.858 - - - - - 0.998 0.860 - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
10. ociad1 ENSDARG00000052334 2797 1.794 - 0.799 - - - 0.995 - - - OCIA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1100]
11. aqr ENSDARG00000016775 1581 1.794 - 0.990 - - - - 0.804 - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
12. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 1.775 - 0.990 - - - - 0.785 - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
13. psma6b ENSDARG00000013966 4410 1.711 - 0.972 - - - - 0.739 - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
14. cyb561a3a ENSDARG00000056281 667 1.71 - - - - - 0.999 0.711 - - cytochrome b561 family, member A3a [Source:ZFIN;Acc:ZDB-GENE-060526-374]
15. FAR2 FAR2 1459 1.708 - - - - - 0.997 - - 0.711
16. parn ENSDARG00000102634 2049 1.706 - - - - - 0.997 - 0.709 - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
17. sar1b ENSDARG00000103403 1699 1.7 - 0.977 - - - - 0.723 - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
18. hnrpdl 14288 1.683 - 0.783 - - - 0.900 - - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
19. col1a2 ENSDARG00000020007 36228 1.622 - 0.847 - - - 0.775 - - - collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
20. FBXO46 ENSDARG00000099814 722 1.552 - - - - - - 0.820 - 0.732 F-box protein 46 [Source:HGNC Symbol;Acc:HGNC:25069]
21. jazf1b ENSDARG00000056793 515 1.47 - - - 0.770 - - 0.700 - - JAZF zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-041212-56]
22. ercc8 ENSDARG00000069283, ENSDARG00000116263 546 1.436 - - - - - - 0.715 - 0.721 excision repair cross-complementation group 8 [Source:ZFIN;Acc:ZDB-GENE-041010-60]
23. si:dkey-3d4.3 ENSDARG00000074079 365 0.999 - - - - - 0.999 - - - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
24. nog2 ENSDARG00000043066 233 0.999 - - - - - 0.999 - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
25. rbm42 ENSDARG00000039910 1111 0.999 - - - - - 0.999 - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
26. TRIM35_3 TRIM35_3 172 0.999 - - - - - 0.999 - - -
27. zmynd8 ENSDARG00000007601 405 0.999 - - - - - 0.999 - - - zinc finger, MYND-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-041119-1]
28. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.999 - - - - - 0.999 - - - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
29. sec63 ENSDARG00000017740 3789 0.999 - - - - - 0.999 - - - SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
30. lap3 ENSDARG00000061981 1188 0.999 - - - - - 0.999 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
31. pld2 ENSDARG00000034262 952 0.999 - - - - - 0.999 - - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
32. amt ENSDARG00000010862, ENSDARG00000113280 367 0.999 - - - - - 0.999 - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
33. VPS37C ENSDARG00000031836 906 0.999 - - - - - 0.999 - - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
34. yipf1 ENSDARG00000014474 542 0.999 - - - - - 0.999 - - - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
35. fktn ENSDARG00000059437, ENSDARG00000109351 340 0.999 - - - - - 0.999 - - - fukutin [Source:ZFIN;Acc:ZDB-GENE-070410-96]
36. zgc:112484 zgc:112484 780 0.999 - - - - - 0.999 - - -
37. rc3h1 rc3h1 1087 0.999 - - - - - 0.999 - - -
38. vac14 ENSDARG00000014303 941 0.999 - - - - - 0.999 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
39. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.999 - - - - - 0.999 - - -
40. C9H2orf76 C9H2orf76 559 0.999 - - - - - 0.999 - - -
41. dfna5 dfna5 361 0.999 - - - - - 0.999 - - -
42. tdrd3 ENSDARG00000025421 633 0.999 - - - - - 0.999 - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
43. eva1a ENSDARG00000061405 896 0.999 - - - - - 0.999 - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
44. CASKIN2_1 CASKIN2_1 2299 0.999 - - - - - 0.999 - - -
45. pgm2 ENSDARG00000018178 985 0.999 - - - - - 0.999 - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
46. sh3yl1 ENSDARG00000074393 815 0.998 - - - - - 0.998 - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
47. ppp2r2a ppp2r2a 5785 0.998 - - - - - 0.998 - - -
48. zfyve21 ENSDARG00000027887 1687 0.998 - - - - - 0.998 - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
49. clip2 ENSDARG00000059596 529 0.998 - - - - - 0.998 - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
50. mrpl41 ENSDARG00000002264 1756 0.998 - - - - - 0.998 - - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
51. mcts1 ENSDARG00000025972 4662 0.998 - - - - - 0.998 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
52. xirp1 ENSDARG00000030722 1486 0.998 - - - - - 0.998 - - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
53. hdac9b ENSDARG00000056642 1148 0.998 - - - - - 0.998 - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
54. trim44 ENSDARG00000051761 509 0.998 - - - - - 0.998 - - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
55. mst4 mst4 1672 0.998 - - - - - 0.998 - - -
56. tfg ENSDARG00000003641, ENSDARG00000115188 3834 0.998 - - - - - 0.998 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
57. PRIM2 ENSDARG00000052721 825 0.998 - - - - - 0.998 - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
58. PROSER1 ENSDARG00000086302 1935 0.998 - - - - - 0.998 - - - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
59. SLC6A16 SLC6A16 630 0.998 - - - - - 0.998 - - -
60. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.998 - - - - - 0.998 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
61. si:ch211-163l21.8 ENSDARG00000042899 724 0.998 - - - - - 0.998 - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
62. yes1 ENSDARG00000005941 3577 0.998 - - - - - 0.998 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
63. pank2 ENSDARG00000003311 881 0.998 - - - - - 0.998 - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
64. las1l ENSDARG00000062457, ENSDARG00000114475 3987 0.998 - - - - - 0.998 - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
65. pdgfaa ENSDARG00000109371, ENSDARG00000110069, ENSDARG00000115665 2120 0.998 - - - - - 0.998 - - - platelet-derived growth factor alpha polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030918-2]
66. uggt1 ENSDARG00000054746 2060 0.998 - - - - - 0.998 - - - UDP-glucose glycoprotein glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-619]
67. pbxip1b ENSDARG00000011824 3726 0.998 - - - - - 0.998 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
68. tnni2b.2 ENSDARG00000029995 935 0.997 - - - - - 0.997 - - - troponin I type 2b (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-9]
69. PLEKHG4 ENSDARG00000075964 2860 0.997 - - - - - 0.997 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
70. zmat5 ENSDARG00000035434 983 0.997 - - - - - 0.997 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
71. GPR108 ENSDARG00000096651 1734 0.997 - - - - - 0.997 - - - G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
72. SMARCA1 ENSDARG00000012776 673 0.997 - - - - - 0.997 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
73. rabgef1 ENSDARG00000014430 1176 0.997 - - - - - 0.997 - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
74. klhl41a ENSDARG00000068888 1034 0.997 - - - - - 0.997 - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
75. triqk ENSDARG00000076296 1274 0.997 - - - - - 0.997 - - - triple QxxK/R motif containing [Source:ZFIN;Acc:ZDB-GENE-070705-75]
76. pes ENSDARG00000018902 3286 0.997 - - - - - 0.997 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
77. FP102157.1 FP102157.1 1096 0.997 - - - - - 0.997 - - -
78. tnfrsf19 ENSDARG00000041869 796 0.997 - 0.997 - - - - - - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
79. sf3b4 ENSDARG00000018574 7470 0.996 - - - - - 0.996 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
80. ptk6a ENSDARG00000017947 682 0.996 - 0.996 - - - - - - - PTK6 protein tyrosine kinase 6a [Source:ZFIN;Acc:ZDB-GENE-081105-117]
81. stxbp3 ENSDARG00000008142 2604 0.996 - - - - - 0.996 - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
82. ndufv2 ENSDARG00000013044 3758 0.996 - - - - - 0.996 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
83. ptp4a2 ptp4a2 3196 0.996 - - - - - 0.996 - - -
84. c1qtnf4 ENSDARG00000024299 578 0.996 - - - - - 0.996 - - - C1q and TNF related 4 [Source:ZFIN;Acc:ZDB-GENE-050417-198]
85. CREM CREM 1333 0.996 - - - - - 0.996 - - -
86. itpkb ENSDARG00000010059 2352 0.996 - - - - - 0.996 - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
87. creg2 ENSDARG00000000666 643 0.996 - - - - - 0.996 - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
88. kdrl ENSDARG00000105215 766 0.996 - - - - - 0.996 - - - kinase insert domain receptor like [Source:ZFIN;Acc:ZDB-GENE-000705-1]
89. flot2b ENSDARG00000069774 2831 0.996 - - - - - 0.996 - - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
90. mboat2a ENSDARG00000031845 1255 0.996 - - - - - 0.996 - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
91. parp1 ENSDARG00000019529 6787 0.996 - - - - - 0.996 - - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
92. mis18a ENSDARG00000035333 555 0.995 - 0.995 - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
93. canx ENSDARG00000037488 4328 0.995 - - - - - 0.995 - - - calnexin [Source:ZFIN;Acc:ZDB-GENE-040426-2797]
94. scn3b ENSDARG00000062359 242 0.995 - 0.995 - - - - - - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
95. prr12a ENSDARG00000074229 1668 0.995 - 0.995 - - - - - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
96. THSD1 ENSDARG00000075273, ENSDARG00000112294 228 0.995 - 0.995 - - - - - - - thrombospondin, type I, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100105-3]
97. SETDB2 ENSDARG00000101462 249 0.995 - 0.995 - - - - - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
98. slc31a2 ENSDARG00000076092 251 0.995 - 0.995 - - - - - - - solute carrier family 31 (copper transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]
99. zgc:63637 zgc:63637 3636 0.995 - - - - - 0.995 - - -
100. acadsb ENSDARG00000076780 2382 0.995 - 0.995 - - - - - - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]

There are 775 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA