Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BRAT1

Gene Name Gene ID Reads Annotation
BRAT1 ENSGALG00000004348 158 BRCA1 associated ATM activator 1, transcript variant X3











Genes with expression patterns similar to BRAT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BRAT1 ENSGALG00000004348 158 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 BRCA1 associated ATM activator 1, transcript variant X3
2. GTF3C4 ENSGALG00000031016 1221 0.925 - - - - - 0.925 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
3. LOC419851 ENSGALG00000023953 80 0.913 - - - - - 0.913 - - - - complement component 4 binding protein, alpha chain
4. AQP1 ENSGALG00000005209 111 0.911 - - - - - 0.911 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
5. DSEL ENSGALG00000042505 92 0.91 - - - - - 0.910 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
6. JAKMIP2 ENSGALG00000007593 95 0.909 - - - - - 0.909 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
7. CLASP1 ENSGALG00000011645 1378 0.908 - - - - - 0.908 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
8. SCAF8 ENSGALG00000013635 421 0.908 - - - - - 0.908 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
9. GPD1L2 ENSGALG00000012061 31 0.908 - - - - - 0.908 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
10. ADNP2 ENSGALG00000035669 318 0.904 - - - - - 0.904 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
11. KIF7 ENSGALG00000006611 33 0.904 - - - - - 0.904 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
12. OLFML1 ENSGALG00000027184 19 0.904 - - - - - 0.904 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
13. RAC3 ENSGALG00000040606 355 0.904 - - - - - 0.904 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
14. SH2D1B ENSGALG00000028448 17 0.903 - - - - - 0.903 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
15. ENSGALG00000002946 ENSGALG00000002946 56 0.901 - - - - - 0.901 - - - -
16. GOLGA1 ENSGALG00000001025 334 0.9 - - - - - 0.900 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
17. HJURP ENSGALG00000015363 54 0.899 - - - - - 0.899 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
18. MXRA5 ENSGALG00000016635 352 0.898 - - - - - 0.898 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
19. NIPAL4 ENSGALG00000039687 29 0.898 - - - - - 0.898 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
20. BLVRA ENSGALG00000031786 23 0.893 - - - - - 0.893 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
21. KLHL40 ENSGALG00000005292 61 0.893 - - - - - 0.893 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
22. DRD4 ENSGALG00000040761 79 0.892 - - - - - 0.892 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
23. APLF ENSGALG00000008745 887 0.892 - - - - - 0.892 - - - - aprataxin and PNKP like factor [Source:NCBI gene;Acc:421264]
24. COBL ENSGALG00000013102 84 0.886 - - - - - 0.886 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
25. C1orf168 C1orf168 98 0.885 - - - - - 0.885 - - - -
26. DBT ENSGALG00000005280 2893 0.882 - - - - - 0.882 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
27. ELMSAN1 ENSGALG00000009282 79 0.881 - - - - - 0.881 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
28. WHAMM ENSGALG00000006002 1678 0.881 - - - - - 0.881 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
29. SPSB3 ENSGALG00000002285 1329 0.878 - - - - - 0.878 - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
30. POLB ENSGALG00000040828 7462 0.878 - - - - - 0.878 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
31. SMOC2 ENSGALG00000011205 340 0.875 - - - - - 0.875 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
32. TERF1 ENSGALG00000037453 4497 0.873 - - - - - 0.873 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
33. PON2 ENSGALG00000009689 1416 0.872 - - - - - 0.872 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
34. MCC ENSGALG00000000208 61 0.872 - - - - - 0.872 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
35. PACSIN2 ENSGALG00000014159 601 0.872 - - - - - 0.872 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
36. RBMX ENSGALG00000006457 34009 0.87 - - - - - 0.870 - - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
37. LTC4SL ENSGALG00000011450 645 0.87 - - - - - 0.870 - - - - leukotriene C4 synthase-like, transcript variant X3
38. FGD4 ENSGALG00000012932 50 0.868 - - - - - 0.868 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
39. ACN9 ACN9 269 0.866 - - - - - 0.866 - - - -
40. TTC7A ENSGALG00000010020 793 0.866 - - - - - 0.866 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
41. EVC2 ENSGALG00000015029 51 0.866 - - - - - 0.866 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
42. C9orf96 C9orf96 43 0.866 - - - - - 0.866 - - - -
43. NAIF1 ENSGALG00000027734 1551 0.864 - - - - - 0.864 - - - - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
44. VRK2 ENSGALG00000032770 117 0.863 - - - - - 0.863 - - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
45. ABCC3 ENSGALG00000007522 340 0.862 - - - - - 0.862 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
46. PRUNE PRUNE 452 0.859 - - - - - 0.859 - - - -
47. SERPINF2 ENSGALG00000002987 236 0.859 - - - - - 0.859 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
48. TPCN3 ENSGALG00000008198 124 0.858 - - - - - 0.858 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
49. DDX59 ENSGALG00000002164 3314 0.857 - - - - - 0.857 - - - - DEAD-box helicase 59 [Source:HGNC Symbol;Acc:HGNC:25360]
50. SERPINB1 ENSGALG00000019555 29 0.857 - - - - - 0.857 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
51. ORMDL3 ENSGALG00000029142 165 0.856 - - - - - 0.856 - - - - ORMDL sphingolipid biosynthesis regulator 3 [Source:HGNC Symbol;Acc:HGNC:16038]
52. WARS ENSGALG00000011228 193 0.852 - - - - - 0.852 - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
53. DIAPH3 ENSGALG00000016937 1069 0.852 - - - - - 0.852 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
54. XPC ENSGALG00000006357 2484 0.851 - - - - - 0.851 - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
55. ENSGALG00000026461 ENSGALG00000026461 61 0.849 - - - - - 0.849 - - - -
56. GYPC ENSGALG00000011566 99 0.848 - - - - - 0.848 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
57. SPI1 ENSGALG00000008127 170 0.846 - - - - - - - 0.846 - - Spi-1 proto-oncogene [Source:NCBI gene;Acc:395879]
58. LOC415478 ENSGALG00000021171 100 0.845 - - - - - 0.845 - - - - transmembrane protein 2-like, transcript variant X2
59. DSL1 DSL1 113 0.843 - - - - - 0.843 - - - -
60. E4F1 ENSGALG00000005900 1814 0.841 - - - - - 0.841 - - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
61. SLC9A9 ENSGALG00000002374 179 0.84 - - - - - 0.840 - - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
62. BET1 ENSGALG00000024485 2451 0.839 - - - - - 0.839 - - - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
63. CELF1 ENSGALG00000008097 4717 0.839 - - - - - 0.839 - - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
64. CRCP ENSGALG00000002587 8809 0.838 - - - - - 0.838 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
65. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 0.838 - - - - - 0.838 - - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
66. CHST13 ENSGALG00000029632 391 0.838 - - - - - 0.838 - - - - carbohydrate sulfotransferase 13 [Source:HGNC Symbol;Acc:HGNC:21755]
67. ECHDC1 ENSGALG00000014828 958 0.833 - - - - - 0.833 - - - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
68. TMEM63A ENSGALG00000009275 1481 0.833 - - - - - 0.833 - - - - transmembrane protein 63A [Source:HGNC Symbol;Acc:HGNC:29118]
69. ZMYM2 ENSGALG00000017139 3747 0.832 - - - - - 0.832 - - - - zinc finger MYM-type containing 2, transcript variant X10
70. PRKDC ENSGALG00000042469 449 0.832 - - - - - 0.832 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
71. CDC14A ENSGALG00000005248 502 0.831 - - - - - 0.831 - - - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
72. PCSK5 ENSGALG00000033256 674 0.828 - - - - - 0.828 - - - - proprotein convertase subtilisin/kexin type 5 [Source:HGNC Symbol;Acc:HGNC:8747]
73. WDR59 ENSGALG00000002798 815 0.826 - - - - - 0.826 - - - - WD repeat domain 59 [Source:NCBI gene;Acc:415688]
74. PRKAR1A ENSGALG00000004237 4785 0.826 - - - - - 0.826 - - - - protein kinase cAMP-dependent type I regulatory subunit alpha [Source:NCBI gene;Acc:417438]
75. FAM20A ENSGALG00000040655 934 0.825 - - - - - 0.825 - - - - FAM20A, golgi associated secretory pathway pseudokinase [Source:HGNC Symbol;Acc:HGNC:23015]
76. NKIRAS1 ENSGALG00000011289 311 0.824 - - - - - 0.824 - - - - NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
77. PPIL3 ENSGALG00000008228 150 0.824 - - - - - 0.824 - - - - peptidylprolyl isomerase like 3 [Source:NCBI gene;Acc:424075]
78. CBX8 ENSGALG00000026548 1063 0.823 - - - - - 0.823 - - - - chromobox 8 [Source:HGNC Symbol;Acc:HGNC:15962]
79. GCHFR ENSGALG00000032239 1608 0.823 - - - - - 0.823 - - - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
80. UACA ENSGALG00000034100 617 0.822 - - - - - 0.822 - - - - uveal autoantigen with coiled-coil domains and ankyrin repeats
81. FANCD2 ENSGALG00000003720 634 0.821 - - - - - - - 0.821 - - Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]
82. NAPRT1 NAPRT1 227 0.82 - - - - - 0.820 - - - -
83. ENSGALG00000014545 ENSGALG00000014545 285 0.82 - - - - - 0.820 - - - -
84. PNPLA4 ENSGALG00000016618 142 0.82 - - - - - 0.820 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
85. EIF2AK4 ENSGALG00000009611 2164 0.819 - - - - - 0.819 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
86. RAD54B ENSGALG00000043597 1699 0.818 - - - - - 0.818 - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
87. YTHDF1 ENSGALG00000005745 135 0.817 - - - - - 0.817 - - - - YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]
88. FKBP1B ENSGALG00000016500 117 0.817 - - - - - 0.817 - - - - FK506 binding protein 1B [Source:NCBI gene;Acc:395254]
89. ASAP2 ENSGALG00000016419 1393 0.815 - - - - - 0.815 - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
90. NAA30 ENSGALG00000012098 4681 0.814 - - - - - 0.814 - - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
91. NPHP4 ENSGALG00000000966 1698 0.814 - - - - - 0.814 - - - - nephrocystin 4, transcript variant X5
92. DDI2 115 0.814 - - - - - 0.814 - - - - DNA damage inducible 1 homolog 2, transcript variant X2
93. ATG10 ENSGALG00000027714 1100 0.814 - - - - - 0.814 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
94. PITPNM2 ENSGALG00000003645 17 0.814 - - - - - - - 0.814 - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
95. SLC3A1 ENSGALG00000009973 608 0.813 - - - - - 0.813 - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
96. CEP290 ENSGALG00000011177 1559 0.81 - - - - - 0.810 - - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
97. C1H12ORF4 2696 0.81 - - - - - 0.810 - - - - chromosome 1 open reading frame, human C12orf4
98. LRRC57 ENSGALG00000009112 1443 0.809 - - - - - 0.809 - - - - leucine rich repeat containing 57 [Source:NCBI gene;Acc:423236]
99. CREB1 ENSGALG00000008494 2219 0.808 - - - - - 0.808 - - - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
100. LEMD3 ENSGALG00000009873 347 0.808 - - - - - 0.808 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]

There are 207 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA