Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BPTF

Gene Name Gene ID Reads Annotation
BPTF ENSGALG00000038222 7521 bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]











Genes with expression patterns similar to BPTF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BPTF ENSGALG00000038222 7521 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
2. RBBP6 ENSGALG00000006043 9708 2.529 0.706 - - - - - 0.955 - - 0.868 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
3. UBR7 ENSGALG00000010842 16488 2.401 - - - - - - 0.831 0.748 - 0.822 Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
4. BFAR ENSGALG00000003111 1778 1.906 - - - - - - 0.953 0.953 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
5. RPA1 ENSGALG00000003072 8023 1.867 - - - - - - 0.941 0.926 - - replication protein A1 [Source:NCBI gene;Acc:417563]
6. NPHP3 ENSGALG00000034586 1465 1.859 - - - - - - 0.932 0.927 - - nephrocystin 3, transcript variant X1
7. AP3S1 ENSGALG00000002341 12388 1.834 - - - - - - 0.885 0.949 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
8. RGCC ENSGALG00000016954 1282 1.82 - - - - - - 0.891 0.929 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
9. AK6 ENSGALG00000020534 4791 1.761 - - - - - - 0.955 - - 0.806 adenylate kinase 6 [Source:NCBI gene;Acc:425215]
10. RILPL2 ENSGALG00000003321 5632 1.756 - - - - - - 0.957 - - 0.799 Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
11. SF3A3 ENSGALG00000001540 9664 1.72 - - - - - - 0.928 0.792 - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
12. TATDN1 ENSGALG00000041072 1585 1.715 - - - - - - - 0.943 - 0.772 TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
13. TBC1D32 ENSGALG00000014876 681 1.707 - - - - - - - 0.935 - 0.772 TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
14. CLPTM1L ENSGALG00000013187 9733 1.695 - - - - - - 0.865 - - 0.830 CLPTM1 like [Source:NCBI gene;Acc:420973]
15. THOC2 ENSGALG00000008507 9501 1.69 0.740 - - - - - 0.950 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
16. SEMA4B ENSGALG00000008297 11202 1.685 - - - - - - 0.950 - - 0.735 semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
17. WDR36 ENSGALG00000000247 11277 1.683 - - - - - - - 0.969 - 0.714 WD repeat domain 36 [Source:NCBI gene;Acc:415609]
18. CEPT1 ENSGALG00000000142 4219 1.675 - - - - - - - 0.920 - 0.755 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
19. FBXO30 ENSGALG00000041684 3033 1.672 - - - - - - - 0.921 - 0.751 F-box protein 30 [Source:HGNC Symbol;Acc:HGNC:15600]
20. PSMG3 ENSGALG00000004203 11240 1.672 - - - - - - 0.903 - - 0.769 proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
21. MYST2 MYST2 8078 1.665 - - - - - - 0.958 - - 0.707
22. ATRX ENSGALG00000007843 34172 1.664 0.793 - - - - - 0.871 - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
23. KIF15 ENSGALG00000036645 9946 1.631 - - - - - - 0.912 0.719 - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
24. PHF14 ENSGALG00000038041 13687 1.622 - - - - - - 0.734 - - 0.888 PHD finger protein 14 [Source:NCBI gene;Acc:420583]
25. MRPL15 ENSGALG00000041086 16820 1.595 - - - - - - - 0.849 - 0.746 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
26. RCC2 ENSGALG00000031684 28067 1.584 - - - - - - 0.761 0.823 - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
27. MGST1 ENSGALG00000013098 17632 1.555 - - - - - - 0.804 - 0.751 - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
28. SERPINB6 ENSGALG00000012866 1582 1.553 - - - - - - - - 0.716 0.837 serpin family B member 6 [Source:NCBI gene;Acc:420895]
29. FAM96B 14435 1.544 - - - - - - 0.736 - - 0.808 family with sequence similarity 96 member B
30. CREPT CREPT 17142 1.513 - - - - - - 0.792 - - 0.721
31. BSDC1 ENSGALG00000003405 3701 1.468 - - - - - - - - 0.708 0.760 BSD domain containing 1 [Source:NCBI gene;Acc:419658]
32. RBM12B ENSGALG00000035129 4314 0.97 - - - - - - 0.970 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
33. METTL11A METTL11A 11876 0.969 - - - - - - 0.969 - - -
34. SDF4 ENSGALG00000001872 6382 0.969 - - - - - - 0.969 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
35. H2AFY_1 ENSGALG00000040141 4895 0.966 - - - - - - 0.966 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
36. DOCK7 6385 0.965 - - - - - - - 0.965 - - dedicator of cytokinesis 7, transcript variant X3
37. MYBBP1A ENSGALG00000001363 10331 0.965 - - - - - - - 0.965 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
38. PMPCB ENSGALG00000008280 6357 0.965 - - - - - - - 0.965 - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
39. AP2B1 ENSGALG00000042125 13229 0.964 - - - - - - 0.964 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
40. CDC7 ENSGALG00000006051 3996 0.962 - - - - - - - 0.962 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
41. SFRP2 ENSGALG00000009241 4716 0.962 - - - - - - - 0.962 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
42. DNA2 ENSGALG00000004037 5426 0.961 - - - - - - 0.961 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
43. ACOT13 ENSGALG00000013632 5550 0.96 - - - - - - - 0.960 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
44. ABCD3 ENSGALG00000005647 4844 0.958 - - - - - - 0.958 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
45. IRAK2 ENSGALG00000008407 5934 0.958 - - - - - - 0.958 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
46. POLR3E ENSGALG00000007008 4010 0.958 - - - - - - 0.958 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
47. ARID4A ENSGALG00000012037 8554 0.958 - - - - - - 0.958 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
48. ARNT2 ENSGALG00000006445 7050 0.958 - - - - - - 0.958 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
49. UTP20 ENSGALG00000011643 3012 0.957 - - - - - - - 0.957 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
50. PPP3R1 ENSGALG00000023648 3417 0.957 - - - - - - 0.957 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
51. CCND1 ENSGALG00000007555 6715 0.956 - - - - - - 0.956 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
52. ENSGALG00000027854 ENSGALG00000027854 5007 0.956 - - - - - - 0.956 - - -
53. SIRT1 ENSGALG00000002761 9028 0.956 - - - - - - 0.956 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
54. CLCN3 ENSGALG00000009674 3704 0.956 - - - - - - 0.956 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
55. TM9SF3 ENSGALG00000005534 15290 0.956 - - - - - - 0.956 - - - transmembrane 9 superfamily member 3
56. E2F6 ENSGALG00000016454 4747 0.956 - - - - - - 0.956 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
57. YBX1 ENSGALG00000004848 20992 0.955 - - - - - - 0.955 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
58. CXorf56 ENSGALG00000008652 7848 0.955 - - - - - - - 0.955 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
59. GCN1L1 GCN1L1 4601 0.955 - - - - - - - 0.955 - -
60. JARID2 ENSGALG00000012702 4280 0.955 - - - - - - - 0.955 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
61. PNO1 ENSGALG00000009093 11153 0.954 - - - - - - 0.954 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
62. EI24 ENSGALG00000038097 24081 0.954 - - - - - - 0.954 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
63. KCTD9 ENSGALG00000000275 3455 0.953 - - - - - - 0.953 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
64. COPG2 ENSGALG00000008144 4542 0.953 - - - - - - - 0.953 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
65. NDUFA9 ENSGALG00000017282 14358 0.953 - - - - - - 0.953 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
66. RPN2 ENSGALG00000003815 18864 0.952 - - - - - - - 0.952 - - ribophorin II [Source:NCBI gene;Acc:419177]
67. LMAN2 ENSGALG00000033232 11740 0.952 - - - - - - - 0.952 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
68. EMG1 ENSGALG00000014568 8102 0.952 - - - - - - - 0.952 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
69. MGAT4B ENSGALG00000005924 2663 0.951 - - - - - - - 0.951 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
70. DNAJA3 ENSGALG00000007821 3963 0.951 - - - - - - 0.951 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
71. USP54 ENSGALG00000005232 2749 0.951 - - - - - - - 0.951 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
72. NFU1 ENSGALG00000030200 6882 0.951 - - - - - - - 0.951 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
73. ARHGAP29 ENSGALG00000005683 3622 0.95 - - - - - - 0.950 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
74. FAM49B ENSGALG00000036490 7984 0.95 - - - - - - - 0.950 - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
75. LEPROTL1 ENSGALG00000024482 4251 0.95 - - - - - - 0.950 - - - leptin receptor overlapping transcript-like 1
76. ATE1 ENSGALG00000009502 3751 0.95 - - - - - - 0.950 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
77. TRAM1 ENSGALG00000041112 22876 0.949 - - - - - - 0.949 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
78. OGFOD1 6926 0.949 - - - - - - 0.949 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
79. NCOA4 ENSGALG00000002066 10544 0.948 - - - - - - 0.948 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
80. DFFA ENSGALG00000002820 2046 0.948 - - - - - - - 0.948 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
81. HSBP1 ENSGALG00000043039 2365 0.948 - - - - - - - 0.948 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
82. MOB2 ENSGALG00000030499 3658 0.948 - - - - - - 0.948 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
83. TBCCD1 ENSGALG00000006566 2696 0.948 - - - - - - 0.948 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
84. RRN3 ENSGALG00000041989 3934 0.947 - - - - - - 0.947 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
85. LACTB2 ENSGALG00000038745 3460 0.947 - - - - - - 0.947 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
86. FAM162A ENSGALG00000007378 8290 0.947 - - - - - - - 0.947 - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
87. TMEM168 ENSGALG00000009443 2452 0.947 - - - - - - - 0.947 - - transmembrane protein 168, transcript variant X1
88. TMEM135 2283 0.947 - - - - - - - 0.947 - - transmembrane protein 135, transcript variant X4
89. INTS10 ENSGALG00000010130 6320 0.947 - - - - - - 0.947 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
90. GCLM ENSGALG00000005782 15789 0.947 - - - - - - 0.947 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
91. WDFY1 ENSGALG00000005158 2512 0.946 - - - - - - - 0.946 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
92. LPAR1 ENSGALG00000015729 3874 0.946 - - - - - - - 0.946 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
93. POR ENSGALG00000002053 5223 0.946 - - - - - - 0.946 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
94. SOD2 ENSGALG00000011661 13178 0.946 - - - - - - 0.946 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
95. KLF5 ENSGALG00000016927 1080 0.945 - - - - - - - 0.945 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
96. HDGFL3 ENSGALG00000006036 13576 0.945 - - - - - - 0.945 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
97. BET1 ENSGALG00000024485 2451 0.945 - - - - - - - 0.945 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
98. NDUFB8 ENSGALG00000005704 5781 0.944 - - - - - - 0.944 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
99. USP25 ENSGALG00000015693 2567 0.944 - - - - - - - 0.944 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
100. MED6 ENSGALG00000029743 9414 0.944 - - - - - - 0.944 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]

There are 526 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA