Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BIVM

Gene Name Gene ID Reads Annotation
BIVM ENSGALG00000016861 3987 basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]











Genes with expression patterns similar to BIVM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BIVM ENSGALG00000016861 3987 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
2. IGDCC4 ENSGALG00000007410 5457 2.19 - - 0.771 - - - 0.702 0.717 - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
3. RCAN3 ENSGALG00000004282 7778 1.743 - - - - - - 0.868 0.875 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
4. RNASEH1 ENSGALG00000016389 2694 1.65 - - - - - - 0.836 0.814 - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
5. WDR47 ENSGALG00000002129 2624 1.643 - - 0.734 - - - 0.909 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
6. NDRG3 ENSGALG00000001492 5919 1.633 - - - - - - 0.819 0.814 - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
7. PKN3 532 1.611 - - - - - - 0.823 0.788 - - protein kinase N3, transcript variant X2
8. FBXL17 ENSGALG00000000276 2443 1.602 - - 0.708 - - - - 0.894 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
9. AIP ENSGALG00000040247 4166 1.6 - - - - - - 0.711 0.889 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
10. NAT9 ENSGALG00000007723 2098 1.597 - - 0.778 - - - 0.819 - - - N-acetyltransferase 9 (putative), transcript variant X7
11. GAS2 ENSGALG00000003655 2672 1.56 - - - - - - 0.825 0.735 - - growth arrest specific 2 [Source:NCBI gene;Acc:422970]
12. CCNK ENSGALG00000011138 6416 1.554 - - - - - - 0.830 0.724 - - cyclin K [Source:NCBI gene;Acc:423446]
13. ETV4 ENSGALG00000036678 2424 1.511 - - 0.782 - - - 0.729 - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
14. TRIP12 ENSGALG00000002929 11713 1.503 - - 0.721 - - - 0.782 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
15. UBR4 ENSGALG00000030563 5225 1.491 - - - - - - 0.746 0.745 - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
16. PSAP ENSGALG00000004769 14759 1.47 - - 0.762 - - - 0.708 - - - prosaposin [Source:NCBI gene;Acc:395602]
17. TBC1D7 ENSGALG00000012731 4891 0.943 - - - - - - - 0.943 - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
18. LIMS1 ENSGALG00000029970 7244 0.924 - - - - - - - 0.924 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
19. SUN1 ENSGALG00000003781 3442 0.914 - - - - - - 0.914 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
20. CCNE2 ENSGALG00000040794 1229 0.906 - - - - - - 0.906 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
21. PARL ENSGALG00000002315 15943 0.902 - - - - - - 0.902 - - - presenilin associated rhomboid like
22. MRPL10 ENSGALG00000014387 12386 0.897 - - - - - - 0.897 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
23. GTPBP4 ENSGALG00000006703 16183 0.894 - - - - - - - 0.894 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
24. ZCCHC2 ENSGALG00000012889 3163 0.894 - - - - - - 0.894 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
25. NCAPG2 ENSGALG00000006525 2319 0.893 - - - - - - 0.893 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
26. FTSJ2 FTSJ2 2951 0.887 - - - - - - 0.887 - - -
27. CDC42SE2 ENSGALG00000027258 4725 0.886 - - - - - - 0.886 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
28. HDAC1 ENSGALG00000003297 3528 0.882 - - - - - - - 0.882 - - histone deacetylase 1 [Source:NCBI gene;Acc:373961]
29. NT5C2 ENSGALG00000008179 1760 0.882 - - - - - - 0.882 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
30. BMI1 ENSGALG00000041267 6618 0.881 - - - - - - 0.881 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
31. MBTPS1 ENSGALG00000003293 4843 0.88 - - - - - - 0.880 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
32. ATM ENSGALG00000017159 893 0.879 - - - - - - 0.879 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
33. EIF3I ENSGALG00000003337 28832 0.878 - - - - - - 0.878 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
34. LOC112529965 ENSGALG00000010758 5395 0.878 - - - - - - - 0.878 - - NADH-cytochrome b5 reductase-like
35. NEK4 ENSGALG00000041428 4473 0.877 - - - - - - 0.877 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
36. CYB5R2 ENSGALG00000032372 7967 0.876 - - - - - - - 0.876 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
37. RFT1 ENSGALG00000001945 2446 0.875 - - - - - - 0.875 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
38. LONP1 ENSGALG00000040492 7133 0.875 - - - - - - 0.875 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
39. DCLK2 ENSGALG00000032386 2253 0.875 - - - - - - 0.875 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
40. HYOU1 ENSGALG00000007659 3555 0.874 - - - - - - 0.874 - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
41. CREPT CREPT 17142 0.873 - - - - - - - 0.873 - -
42. LIMCH1 ENSGALG00000014258 1987 0.873 - - - - - - 0.873 - - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
43. HELLS ENSGALG00000005451 7094 0.87 - - - - - - 0.870 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
44. FAM193A ENSGALG00000015667 3075 0.87 - - - - - - 0.870 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
45. TAF5 ENSGALG00000008241 5227 0.869 - - - - - - - 0.869 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
46. USP54 ENSGALG00000005232 2749 0.869 - - - - - - 0.869 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
47. CCNL1 ENSGALG00000009699 1033 0.868 - - - - - - 0.868 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
48. PDHX ENSGALG00000033753 2799 0.867 - - - - - - 0.867 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
49. BRCA1 ENSGALG00000002781 2052 0.866 - - - - - - - 0.866 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
50. PAPD7 ENSGALG00000013061 2031 0.866 - - - - - - 0.866 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
51. ZFYVE19 ENSGALG00000008460 2750 0.865 - - - - - - 0.865 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
52. ALDH18A1 ENSGALG00000034655 3038 0.865 - - - - - - 0.865 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
53. MURC 3759 0.864 - - - - - - - 0.864 - - muscle related coiled-coil protein
54. IBTK ENSGALG00000015864 3154 0.863 - - - - - - - 0.863 - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
55. RASA3 ENSGALG00000016817 2146 0.863 - - - - - - - 0.863 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
56. COPS8 ENSGALG00000033385 10166 0.863 - - - - - - 0.863 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
57. XPO7 ENSGALG00000001838 1875 0.863 - - - - - - 0.863 - - - exportin 7 [Source:NCBI gene;Acc:426925]
58. GLT8D1 ENSGALG00000001642 4232 0.862 - - - - - - - 0.862 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
59. CCNL2 ENSGALG00000001551 2620 0.862 - - - - - - - 0.862 - - cyclin L2 [Source:NCBI gene;Acc:395124]
60. SGSM3 ENSGALG00000012033 1839 0.862 - - - - - - 0.862 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
61. ITFG2 ENSGALG00000014335 1896 0.861 - - - - - - - 0.861 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
62. TAF1A ENSGALG00000009441 2431 0.861 - - - - - - - 0.861 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
63. ALAS1 3660 0.86 - - - - - - - 0.860 - - 5'-aminolevulinate synthase 1, transcript variant X1
64. CLDND1 ENSGALG00000039538 5048 0.859 - - - - - - 0.859 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
65. MBNL2 ENSGALG00000016890 3162 0.859 - - - - - - 0.859 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
66. TPR ENSGALG00000005105 2924 0.859 - - - - - - 0.859 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
67. UBE2V2 ENSGALG00000028133 7044 0.859 - - - - - - 0.859 - - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
68. MGLL ENSGALG00000032736 612 0.859 - - - - - - 0.859 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
69. ENSGALG00000002852 ENSGALG00000002852 2687 0.859 - - - - - - 0.859 - - -
70. GAS6 ENSGALG00000016820 481 0.858 - - - - - - 0.858 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
71. C5H15ORF29 C5H15ORF29 3709 0.858 - - - - - - 0.858 - - -
72. NCAPH ENSGALG00000032270 2103 0.858 - - - - - - - 0.858 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
73. MST1 ENSGALG00000002722 994 0.858 - - - - - - 0.858 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
74. TM9SF4 ENSGALG00000006568 567 0.857 - - - - - - 0.857 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
75. BACE2 ENSGALG00000034932 1570 0.857 - - - - - - - 0.857 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
76. TMEM135 2283 0.855 - - - - - - 0.855 - - - transmembrane protein 135, transcript variant X4
77. SLC30A4 ENSGALG00000005703 5696 0.855 - - - - - - 0.855 - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
78. WIPI1 ENSGALG00000004215 3359 0.854 - - - - - - 0.854 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
79. TERF1 ENSGALG00000037453 4497 0.854 - - - - - - - 0.854 - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
80. SLC19A1 ENSGALG00000030511 1397 0.854 - - - - - - - 0.854 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]
81. MSL3 ENSGALG00000041433 2957 0.854 - - - - - - 0.854 - - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
82. ENSGALG00000028164 ENSGALG00000028164 3325 0.852 - - - - - - 0.852 - - -
83. SUGP1 ENSGALG00000042132 2771 0.851 - - - - - - 0.851 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
84. MESDC1 1013 0.851 - - - - - - 0.851 - - - mesoderm development candidate 1
85. COQ5 ENSGALG00000007185 5614 0.849 - - - - - - 0.849 - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
86. JMJD7 ENSGALG00000026846 1320 0.849 - - - - - - 0.849 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
87. SCAF4 ENSGALG00000033965 2027 0.849 - - - - - - 0.849 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
88. TXNDC11 ENSGALG00000003154 2224 0.849 - - - - - - - 0.849 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
89. C9orf64 ENSGALG00000012589 6097 0.848 - - - - - - - 0.848 - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
90. PTTG1 17936 0.848 - - - - - - - 0.848 - - pituitary tumor-transforming 1, transcript variant X1
91. NT5C3B ENSGALG00000003651 5190 0.848 - - - - - - - 0.848 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
92. DNAJC16 ENSGALG00000032832 750 0.847 - - - - - - 0.847 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
93. SRP72 ENSGALG00000011403 13666 0.846 - - - - - - 0.846 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
94. ENSGALG00000013233 ENSGALG00000013233 3265 0.846 - - - - - - 0.846 - - -
95. NIN ENSGALG00000012361 2284 0.845 - - - - - - 0.845 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
96. FAM57A ENSGALG00000004820 1492 0.845 - - - - - - 0.845 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
97. PECR ENSGALG00000011497 1714 0.845 - - - - - - - 0.845 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
98. USP20 ENSGALG00000041104 3186 0.845 - - - - - - 0.845 - - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
99. BARX2B BARX2B 1983 0.844 - - 0.844 - - - - - - -
100. DIEXF ENSGALG00000009887 4782 0.844 - - - - - - 0.844 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]

There are 522 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA