Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BF1

Gene Name Gene ID Reads Annotation
BF1 ENSGALG00000033932 18 MHC BF1 class I [Source:NCBI gene;Acc:693260]











Genes with expression patterns similar to BF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BF1 ENSGALG00000033932 18 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 MHC BF1 class I [Source:NCBI gene;Acc:693260]
2. ARNTL ENSGALG00000005378 19 1.71 - - 0.927 - - - - 0.783 - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
3. BRINP3 ENSGALG00000033407 40 1.676 - - - - - 0.837 - - - 0.839 BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
4. NDST4 ENSGALG00000012015 43 1.607 - - - - - - - 0.783 - 0.824 N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]
5. TG ENSGALG00000039509 19 1.569 - - - - 0.854 - 0.715 - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
6. DNAH5 ENSGALG00000012997 28 1.462 - - - 0.707 - - 0.755 - - - dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
7. ENSGALG00000026222 ENSGALG00000026222 3 1 - - - - - - - - - 1.000
8. SNORA53 SNORA53 6 1 - - - - - - - - - 1.000
9. CKV6.3 CKV6.3 13 1 - - - - - - - - - 1.000
10. VIPR1 ENSGALG00000005259 3 1 - - - - - - - - - 1.000 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
11. CUBN ENSGALG00000008704 21 1 - - - - - - - - - 1.000 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
12. XKRX ENSGALG00000006637 13 1 - - - - - - - - - 1.000 XK related, X-linked, transcript variant X4
13. LYG2 ENSGALG00000016761 7 1 - - - - - - - - - 1.000 lysozyme g2 [Source:NCBI gene;Acc:395708]
14. COL25A1 ENSGALG00000039411 5 1 - - - - - - - - - 1.000 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
15. ENTPD5 ENSGALG00000010202 69 0.986 - - - - - - - - - 0.986 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
16. MANSC4 32 0.985 - - - - - - - - - 0.985 MANSC domain containing 4, transcript variant X1
17. SORL1 ENSGALG00000006598 39 0.982 - - - - - - - - - 0.982 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
18. FAM126B ENSGALG00000020869 19 0.978 - - - - - - - - - 0.978 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
19. AREG ENSGALG00000010866 16 0.968 - - - - - - - - - 0.968 amphiregulin [Source:NCBI gene;Acc:428752]
20. COL23A1 ENSGALG00000006708 181 0.967 - - - - - - - - - 0.967 collagen type XXIII alpha 1 chain, transcript variant X1
21. IKZF1 ENSGALG00000013086 58 0.964 - - - - - - - - - 0.964 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
22. PEAK1 ENSGALG00000002759 39 0.96 - - - - - - - - - 0.960 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
23. UTS2RL ENSGALG00000012419 118 0.956 - - - - - - - - - 0.956 urotensin-2 receptor-like
24. CP ENSGALG00000030773 119 0.953 - - - - - - 0.953 - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
25. DLEC1 ENSGALG00000005826 23 0.947 - - - - - - - 0.947 - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
26. TC2N ENSGALG00000010738 92 0.944 - - - - - - - - - 0.944 tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
27. ARHGAP15 ENSGALG00000012421 58 0.936 - - - - - - - - - 0.936 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
28. GABRB4 GABRB4 12 0.934 - - - - - - - - - 0.934
29. CHSY3 ENSGALG00000026899 80 0.932 - - - - - - - - - 0.932 chondroitin sulfate synthase 3 [Source:HGNC Symbol;Acc:HGNC:24293]
30. MUC5B MUC5B 62 0.932 - - - - - - - - - 0.932
31. ZFAT ENSGALG00000037698 34 0.931 - - - - - - - - - 0.931 zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
32. CCDC147 CCDC147 53 0.929 - - - - - - - - - 0.929
33. KIAA1549L ENSGALG00000012020 33 0.925 - - - - - - - - - 0.925 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
34. TMTC1 ENSGALG00000012956 160 0.923 - - - - - - - - - 0.923 transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
35. SERPINB14 SERPINB14 196 0.923 - - - - - - - - - 0.923
36. IL34 ENSGALG00000028466 270 0.922 - - - - - - - - - 0.922 interleukin 34
37. SYDE2 ENSGALG00000038776 192 0.917 - - - - - - - - - 0.917 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
38. MYH1G ENSGALG00000028612 7 0.916 - - - - - - - - - 0.916 Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
39. FGF7 ENSGALG00000028158 189 0.914 - - - - - - - - - 0.914 fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
40. CDKL5 ENSGALG00000016529 26 0.914 - - - - - - - - - 0.914 cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
41. FRRS1 ENSGALG00000005418 332 0.914 - - - - - - - - - 0.914 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
42. ENSGALG00000001734 ENSGALG00000001734 408 0.909 - - - - - - - - - 0.909
43. GABRD ENSGALG00000001282 8 0.908 - - - - - - - - - 0.908 gamma-aminobutyric acid type A receptor delta subunit [Source:HGNC Symbol;Acc:HGNC:4084]
44. ATXN1L ENSGALG00000028253 17 0.907 - - - - - 0.907 - - - - ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
45. CCNI2 ENSGALG00000023812 21 0.906 - - - - - - - - - 0.906 cyclin I family member 2, transcript variant X2
46. EPG5 ENSGALG00000036259 71 0.903 - - - - - - - - - 0.903 ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
47. PIK3C2G ENSGALG00000013117 53 0.895 - - - - - - - - - 0.895 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]
48. FMN1 ENSGALG00000009723 100 0.894 - - - - - - - - - 0.894 formin 1 [Source:NCBI gene;Acc:386747]
49. RAB11FIP1 41 0.891 - - - - - - - - - 0.891 RAB11 family interacting protein 1, transcript variant X2
50. ZBTB6 ENSGALG00000021570 15 0.891 - - - - - - - - - 0.891 zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
51. E2F3 ENSGALG00000012680 21 0.891 - - - - - - - - - 0.891 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
52. CARD9 ENSGALG00000001889 83 0.889 - - - - - - - - - 0.889 caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]
53. VILL ENSGALG00000005763 4 0.889 - - - 0.889 - - - - - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
54. MMP11 ENSGALG00000005968 3 0.889 - - - 0.889 - - - - - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
55. ENSGALG00000022857 ENSGALG00000022857 4 0.889 - - - 0.889 - - - - - -
56. CDH23 ENSGALG00000004653, ENSGALG00000036824 2 0.889 - - - 0.889 - - - - - - cadherin related 23, transcript variant X17
57. H2AFX ENSGALG00000045705 7 0.889 - - - 0.889 - - - - - - H2A histone family member X
58. UBE3C ENSGALG00000006461 57 0.889 - - - 0.889 - - - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
59. CMTR1 ENSGALG00000010149 12 0.889 - - - 0.889 - - - - - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
60. ENSGALG00000009777 ENSGALG00000009777 3 0.889 - - - 0.889 - - - - - -
61. DGKE ENSGALG00000003131 17 0.888 - - - - - - - - - 0.888 diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
62. HBE1 ENSGALG00000028273 189 0.887 - - 0.887 - - - - - - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
63. GABRG4 GABRG4 16 0.884 - - - - - - - - - 0.884
64. CEP250 ENSGALG00000026151 163 0.881 - - - - - - - - - 0.881 centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
65. TESK2 ENSGALG00000010230 9 0.881 - - 0.881 - - - - - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
66. GPAM ENSGALG00000008795 18 0.879 - - 0.879 - - - - - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:24865]
67. LRBA ENSGALG00000010061 67 0.877 - - - - - - - - - 0.877 LPS responsive beige-like anchor protein [Source:HGNC Symbol;Acc:HGNC:1742]
68. CCDC39 ENSGALG00000021855 23 0.877 - - - - - - - - - 0.877 coiled-coil domain containing 39
69. RNF19B ENSGALG00000039716 662 0.876 - - - - - - - - - 0.876 ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
70. C1S ENSGALG00000014603 80 0.873 - - - - - 0.873 - - - - complement C1s [Source:NCBI gene;Acc:418294]
71. LOC417937 ENSGALG00000011717 31 0.873 - - - - - - - - - 0.873 solute carrier family 23 member 1-like, transcript variant X1
72. IDO2 ENSGALG00000024085 2 0.87 - - - 0.870 - - - - - - indoleamine 2,3-dioxygenase 2
73. AQP3 ENSGALG00000002452 97 0.87 - - - - - - - - - 0.870 aquaporin 3 (Gill blood group) [Source:HGNC Symbol;Acc:HGNC:636]
74. DKK-1 DKK-1 146 0.87 - - - 0.870 - - - - - -
75. GRHL1 ENSGALG00000038495 221 0.865 - - - - - - - - - 0.865 grainyhead like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:17923]
76. PPCDC ENSGALG00000001711 131 0.858 - - - 0.858 - - - - - - phosphopantothenoylcysteine decarboxylase [Source:HGNC Symbol;Acc:HGNC:28107]
77. SKTMOD SKTMOD 207 0.858 - - - - - - - - - 0.858
78. HHLA2 ENSGALG00000022871 19 0.858 - - - - - - - 0.858 - - HERV-H LTR-associating 2 [Source:HGNC Symbol;Acc:HGNC:4905]
79. RAPSN ENSGALG00000008100 53 0.857 - - - - - - - - - 0.857 receptor associated protein of the synapse [Source:NCBI gene;Acc:395986]
80. SAMD10 ENSGALG00000006007 15 0.854 - - - - - 0.854 - - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
81. GNIH GNIH 8 0.854 - - - - - 0.854 - - - -
82. ANKS1A ENSGALG00000002723 3 0.854 - - - - 0.854 - - - - - ankyrin repeat and sterile alpha motif domain containing 1A [Source:HGNC Symbol;Acc:HGNC:20961]
83. CD40 ENSGALG00000007015 7 0.854 - - - - 0.854 - - - - - CD40 molecule [Source:NCBI gene;Acc:395385]
84. AXDND1 ENSGALG00000004173 3 0.854 - - - - 0.854 - - - - - axonemal dynein light chain domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26564]
85. ZNF131 ENSGALG00000033435 56 0.854 - - - - 0.854 - - - - - zinc finger protein 131, transcript variant X1
86. WISP2 ENSGALG00000004154 4 0.854 - - - - - 0.854 - - - - WNT1 inducible signaling pathway protein 2 [Source:HGNC Symbol;Acc:HGNC:12770]
87. gga-mir-6569 ENSGALG00000026551 10 0.854 - - - - 0.854 - - - - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
88. DMC1 ENSGALG00000012236 1 0.854 - - - - - 0.854 - - - - DNA meiotic recombinase 1 [Source:HGNC Symbol;Acc:HGNC:2927]
89. TLR3 ENSGALG00000013468 35 0.854 - - - - - 0.854 - - - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
90. GPX2 ENSGALG00000042031 4 0.854 - - - - - 0.854 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
91. ENSGALG00000012389 ENSGALG00000012389 6 0.854 - - - - 0.854 - - - - -
92. POMGNT1 ENSGALG00000010351 3 0.854 - - - - 0.854 - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
93. NSUN6 ENSGALG00000008564 9 0.854 - - - - 0.854 - - - - - NOP2/Sun RNA methyltransferase family member 6 [Source:HGNC Symbol;Acc:HGNC:23529]
94. MYOZ1 ENSGALG00000005226 1 0.854 - - - - - 0.854 - - - - myozenin 1 [Source:HGNC Symbol;Acc:HGNC:13752]
95. CFAP99 ENSGALG00000015685 32 0.854 - - - - - - - - - 0.854 cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
96. UCP3 ENSGALG00000017316 30 0.854 - - - - - 0.854 - - - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
97. TNN ENSGALG00000004538 21 0.854 - - - - 0.854 - - - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
98. PNP ENSGALG00000044146 2 0.854 - - - - 0.854 - - - - - purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]
99. ADCYAP1 ENSGALG00000014858 9 0.854 - - - - - 0.854 - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
100. SPATA6 ENSGALG00000010502 16 0.854 - - - - 0.854 - - - - - spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]

There are 243 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA