Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for BEST3

Gene Name Gene ID Reads Annotation
BEST3 ENSGALG00000010029 11 bestrophin 3 [Source:NCBI gene;Acc:417849]











Genes with expression patterns similar to BEST3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. BEST3 ENSGALG00000010029 11 4 - - 1.000 1.000 1.000 1.000 - - - - bestrophin 3 [Source:NCBI gene;Acc:417849]
2. ISOC1 ENSGALG00000000161 46 1 - - - - - 1.000 - - - - isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
3. SNORA77 SNORA77 5 1 - - - - - 1.000 - - - -
4. BCR ENSGALG00000006695 22 1 - - - - - 1.000 - - - - BCR, RhoGEF and GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:1014]
5. COG3 ENSGALG00000016980 15 1 - - - - - 1.000 - - - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
6. SULT1B ENSGALG00000023122 7 1 - - - - - 1.000 - - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
7. C3orf33 ENSGALG00000026293 12 1 - - - - - 1.000 - - - - chromosome 3 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:26434]
8. C11orf87 ENSGALG00000017155 2 1 - - - - - 1.000 - - - - chromosome 11 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:33788]
9. ADAM28 ENSGALG00000000357 57 1 - - - - - 1.000 - - - - ADAM metallopeptidase domain 28, transcript variant X2
10. RCAN2 ENSGALG00000016709 8 1 - - - - - 1.000 - - - - regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
11. ABCD4 ENSGALG00000010229 3 1 - - - - - 1.000 - - - - ATP binding cassette subfamily D member 4 [Source:HGNC Symbol;Acc:HGNC:68]
12. FES ENSGALG00000008340 223 1 - - - - - 1.000 - - - - FES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]
13. SLCO2A1 ENSGALG00000006471 18 1 - - - - - 1.000 - - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
14. SLC18A2 ENSGALG00000009289 11 1 - - - - - 1.000 - - - - solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
15. ENSGALG00000002522 ENSGALG00000002522 21 1 - - - - - 1.000 - - - -
16. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - 1.000 - - - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
17. SYNPO2L ENSGALG00000005207 60 1 - - - - - 1.000 - - - - synaptopodin 2 like [Source:HGNC Symbol;Acc:HGNC:23532]
18. DSC1 ENSGALG00000015140 16 1 - - - - - 1.000 - - - - desmocollin 1, transcript variant X1
19. B3GALT6 ENSGALG00000001859 5 1 - - - - - 1.000 - - - - beta-1,3-galactosyltransferase 6
20. PRKCZ ENSGALG00000001270 12 1 - - - - - 1.000 - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
21. DNAJC28 ENSGALG00000037414 6 1 - - - - - 1.000 - - - - DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
22. CEND1 ENSGALG00000032320 0 1 - - - - - 1.000 - - - - cell cycle exit and neuronal differentiation 1 [Source:NCBI gene;Acc:770044]
23. USP12 ENSGALG00000034708 13 1 - - - - - 1.000 - - - - ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:HGNC:20485]
24. P2RX2 ENSGALG00000044649 1 1 - - - - - 1.000 - - - - purinergic receptor P2X 2 [Source:HGNC Symbol;Acc:HGNC:15459]
25. NIM1 NIM1 18 1 - - - - - 1.000 - - - -
26. SLC45A2 ENSGALG00000003310 55 1 - - - - - 1.000 - - - - solute carrier family 45 member 2 [Source:NCBI gene;Acc:431665]
27. ENSGALG00000003050 ENSGALG00000003050 4 1 - - - - - 1.000 - - - -
28. TGFBR2 ENSGALG00000011442 3 1 - - - - - 1.000 - - - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
29. ENSGALG00000022694 ENSGALG00000022694 1 1 - - - - - 1.000 - - - -
30. CRDS2 CRDS2 22 1 - - - - - 1.000 - - - -
31. MILR1 ENSGALG00000046212 7 1 - - - - - 1.000 - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
32. ALOX5AP ENSGALG00000026781 28 1 - - - - - 1.000 - - - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
33. K123 ENSGALG00000041978 16 1 - - - - - 1.000 - - - - K123 protein [Source:NCBI gene;Acc:395873]
34. ENSGALG00000023589 ENSGALG00000023589 1 1 - - - - - 1.000 - - - -
35. ALPI ENSGALG00000023866 19 1 - - - - - 1.000 - - - - alkaline phosphatase, intestinal, transcript variant X2
36. IGLL1 ENSGALG00000021139 1 1 - - - - - 1.000 - - - - immunoglobulin lambda-like polypeptide 1 [Source:NCBI gene;Acc:416928]
37. GAL12 GAL12 2 1 - - - - - 1.000 - - - -
38. FAM83A ENSGALG00000041748 8 1 - - - - - 1.000 - - - - family with sequence similarity 83 member A [Source:HGNC Symbol;Acc:HGNC:28210]
39. CCL19 ENSGALG00000028256 6 1 - - - - - 1.000 - - - - C-C motif chemokine ligand 19 [Source:NCBI gene;Acc:427406]
40. GPR103 GPR103 18 1 - - - - - 1.000 - - - -
41. POLR3G ENSGALG00000014650 7 1 - - - - - 1.000 - - - - RNA polymerase III subunit G, transcript variant X2
42. gga-mir-20b gga-mir-20b 7 1 - - - - - 1.000 - - - -
43. ATP9B 33 1 - - - - 1.000 - - - - - ATPase phospholipid transporting 9B (putative), transcript variant X2
44. TMEM72 ENSGALG00000026808 5 1 - - - - 1.000 - - - - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
45. MEL1B MEL1B 5 1 - - - - - 1.000 - - - -
46. OPNP ENSGALG00000004924 0 1 - - - - - 1.000 - - - - opsin, pineal [Source:NCBI gene;Acc:396377]
47. TAGAP ENSGALG00000013747 34 1 - - - - - 1.000 - - - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
48. IFNA ENSGALG00000013245, ENSGALG00000025984, ENSGALG00000028305, ENSGALG00000044396, ENSGALG00000045884 3 1 - - - - - 1.000 - - - - interferon type A1/A2-like 4 [Source:NCBI gene;Acc:100857744]
49. ABI1 ENSGALG00000007547 12 1 - - - - - 1.000 - - - - abl interactor 1 [Source:NCBI gene;Acc:420489]
50. FAM83B ENSGALG00000016299 17 1 - - - - - 1.000 - - - - family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
51. ENSGALG00000027244 ENSGALG00000027244 0 1 - - - - - 1.000 - - - -
52. CAPSL ENSGALG00000013376 22 1 - - - - - 1.000 - - - - calcyphosine like [Source:HGNC Symbol;Acc:HGNC:28375]
53. PLEK ENSGALG00000008756 1 1 - - - - - 1.000 - - - - pleckstrin [Source:NCBI gene;Acc:395669]
54. SNORA54 SNORA54 2 1 - - - - - 1.000 - - - -
55. VPS37C ENSGALG00000038541 169 1 - - - - - 1.000 - - - - VPS37C, ESCRT-I subunit [Source:NCBI gene;Acc:423023]
56. SLC7A2 ENSGALG00000013627 58 1 - - - - 1.000 - - - - - solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
57. SLC11A1 ENSGALG00000011434 0 1 - - - - - 1.000 - - - - solute carrier family 11 member 1 [Source:NCBI gene;Acc:395811]
58. CERS6 ENSGALG00000010902 14 1 - - - - - 1.000 - - - - ceramide synthase 6 [Source:HGNC Symbol;Acc:HGNC:23826]
59. CNST ENSGALG00000010649 18 1 - - - - - 1.000 - - - - consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
60. LRRC7 ENSGALG00000011284 13 1 - - - - - 1.000 - - - - leucine rich repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:18531]
61. ATP8B2 ENSGALG00000034501 0 1 - - - - - 1.000 - - - - ATPase phospholipid transporting 8B2 [Source:HGNC Symbol;Acc:HGNC:13534]
62. TNFAIP2 ENSGALG00000011446 32 1 - - - - - 1.000 - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
63. NR3C1 ENSGALG00000032992 4 1 - - - - - 1.000 - - - - nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
64. SGCZ ENSGALG00000013684 2 1 - - - - - 1.000 - - - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
65. BACH2 ENSGALG00000015605 1 1 - - - - - 1.000 - - - - BTB domain and CNC homolog 2 [Source:HGNC Symbol;Acc:HGNC:14078]
66. CCR7 ENSGALG00000035733 37 1 - - - - - 1.000 - - - - C-C motif chemokine receptor 7 [Source:NCBI gene;Acc:428315]
67. DAGLA ENSGALG00000036492 3 1 - - - - - 1.000 - - - - diacylglycerol lipase alpha [Source:HGNC Symbol;Acc:HGNC:1165]
68. SLC35A3 12 0.973 - - - - - 0.973 - - - - solute carrier family 35 member A3, transcript variant X7
69. EDN2 ENSGALG00000000667 219 0.971 - - - - - 0.971 - - - - endothelin 2 [Source:NCBI gene;Acc:419559]
70. ENSGALG00000004904 ENSGALG00000004904 237 0.97 - - - - - 0.970 - - - -
71. ENSGALG00000001720 ENSGALG00000001720 10 0.961 - - - - - 0.961 - - - -
72. SLC35D3 ENSGALG00000030545 55 0.961 - - - - - 0.961 - - - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
73. TEKT4 ENSGALG00000005247 20 0.955 - - - 0.955 - - - - - - tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]
74. IPPK ENSGALG00000004684 39 0.955 - - - - - 0.955 - - - - inositol-pentakisphosphate 2-kinase [Source:NCBI gene;Acc:415951]
75. SLC16A3 ENSGALG00000002728 323 0.955 - - - 0.955 - - - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
76. ST8SIA1 ENSGALG00000013211 14 0.955 - - - 0.955 - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
77. GPR183 ENSGALG00000016881 5 0.955 - - - 0.955 - - - - - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
78. CLRN1 ENSGALG00000010384 7 0.955 - - - 0.955 - - - - - - clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]
79. MUC16 3 0.955 - - - 0.955 - - - - - - mucin 16, cell surface associated
80. SNORA81 SNORA81 15 0.949 - - - 0.949 - - - - - -
81. UBE2J1 ENSGALG00000015775 13 0.948 - - - - 0.948 - - - - - ubiquitin conjugating enzyme E2 J1 [Source:NCBI gene;Acc:395528]
82. NIPA1 ENSGALG00000039811 20 0.925 - - - 0.925 - - - - - - NIPA magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:17043]
83. STEAP1 ENSGALG00000009006 16 0.921 - - - 0.921 - - - - - - STEAP family member 1
84. LRRC52 ENSGALG00000003443 20 0.92 - - - 0.920 - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
85. OBSL1 ENSGALG00000011242 22 0.92 - - - - - 0.920 - - - - obscurin like 1 [Source:HGNC Symbol;Acc:HGNC:29092]
86. GYLTL1B GYLTL1B 3 0.92 - - - - - 0.920 - - - -
87. TGFBRAP1 ENSGALG00000016795 81 0.915 - - - - - 0.915 - - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
88. ANKRD1 ENSGALG00000006491 691 0.914 - - - - - 0.914 - - - - ankyrin repeat domain 1 [Source:NCBI gene;Acc:378926]
89. FAM43B ENSGALG00000026367 2 0.91 - - 0.910 - - - - - - - family with sequence similarity 43 member B [Source:HGNC Symbol;Acc:HGNC:31791]
90. HDAC10 ENSGALG00000041251 57 0.9 - - - - - 0.900 - - - - histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
91. TMEM255B ENSGALG00000035839 46 0.89 - - - - - 0.890 - - - - transmembrane protein 255B [Source:HGNC Symbol;Acc:HGNC:28297]
92. CHTL1A CHTL1A 79 0.885 - - - - - 0.885 - - - -
93. TYRO3 ENSGALG00000008631 23 0.879 - - - 0.879 - - - - - - TYRO3 protein tyrosine kinase [Source:NCBI gene;Acc:395336]
94. EVX1 ENSGALG00000037310 1974 0.872 - - - 0.872 - - - - - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
95. JDP2 ENSGALG00000010322 11 0.866 - - - - - 0.866 - - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
96. ENSGALG00000023180 ENSGALG00000023180 83 0.866 - - - - - 0.866 - - - -
97. TRAF3IP3 ENSGALG00000001373 11 0.866 - - - - - 0.866 - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
98. GC ENSGALG00000011612 53 0.862 - - - - - 0.862 - - - - GC, vitamin D binding protein [Source:NCBI gene;Acc:395696]
99. KCTD15 ENSGALG00000004907 8 0.858 - - 0.858 - - - - - - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
100. PTPRD ENSGALG00000015058 37 0.856 - - - - - 0.856 - - - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]

There are 94 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA