Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for BC048403

Gene Name Gene ID Reads Annotation
BC048403 ENSMUSG00000053684 84 cDNA sequence BC048403 [Source:MGI Symbol;Acc:MGI:2670984]







Genes with expression patterns similar to BC048403

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. BC048403 ENSMUSG00000053684 84 6 1.000 1.000 1.000 1.000 1.000 1.000 cDNA sequence BC048403 [Source:MGI Symbol;Acc:MGI:2670984]
2. Lmod1 ENSMUSG00000048096 44 1.669 - - - - 0.855 0.814 leiomodin 1 (smooth muscle) [Source:MGI Symbol;Acc:MGI:2135671]
3. Ctbs ENSMUSG00000028189 182 1.564 - - - - 0.769 0.795 chitobiase [Source:MGI Symbol;Acc:MGI:1921495]
4. C230014O12Rik ENSMUSG00000087461 17 0.941 - - - - - 0.941 RIKEN cDNA C230014O12 gene [Source:MGI Symbol;Acc:MGI:3045377]
5. Gm12368 ENSMUSG00000083934 7 0.926 - - - - - 0.926 predicted gene 12368 [Source:MGI Symbol;Acc:MGI:3649555]
6. Gm10822 ENSMUSG00000097377 9 0.926 - - - - - 0.926 predicted gene 10822 [Source:MGI Symbol;Acc:MGI:3641955]
7. Gm13648 ENSMUSG00000086549 21 0.926 - - - - - 0.926 predicted gene 13648 [Source:MGI Symbol;Acc:MGI:3652033]
8. Crb3 ENSMUSG00000044279 54 0.925 - - - - - 0.925 crumbs family member 3 [Source:MGI Symbol;Acc:MGI:2670904]
9. Mall ENSMUSG00000027377 52 0.924 - - - - 0.924 - mal, T cell differentiation protein-like [Source:MGI Symbol;Acc:MGI:2385152]
10. 5330417C22Rik ENSMUSG00000040412 23 0.924 - - - - - 0.924 RIKEN cDNA 5330417C22 gene [Source:MGI Symbol;Acc:MGI:1923930]
11. Srcrb4d Srcrb4d 20 0.924 - - - - - 0.924
12. Gm10166 Gm10166 15 0.922 - - - - - 0.922
13. Ppargc1b ENSMUSG00000033871 120 0.921 - - - - 0.921 - peroxisome proliferative activated receptor, gamma, coactivator 1 beta [Source:MGI Symbol;Acc:MGI:2444934]
14. 1700109H08Rik ENSMUSG00000008307 17 0.913 - - - - - 0.913 RIKEN cDNA 1700109H08 gene [Source:MGI Symbol;Acc:MGI:1924286]
15. Gm16070 ENSMUSG00000085125 40 0.911 - - - - - 0.911 predicted gene 16070 [Source:MGI Symbol;Acc:MGI:3801761]
16. Gast ENSMUSG00000017165 13 0.911 - - - - 0.911 - gastrin [Source:MGI Symbol;Acc:MGI:104768]
17. Gm15457 ENSMUSG00000087374 23 0.909 - - - - - 0.909 predicted gene 15457 [Source:MGI Symbol;Acc:MGI:3705190]
18. Il16 ENSMUSG00000001741 60 0.906 - - - - 0.906 - interleukin 16 [Source:MGI Symbol;Acc:MGI:1270855]
19. Il18 ENSMUSG00000039217 25 0.904 - - - - - 0.904 interleukin 18 [Source:MGI Symbol;Acc:MGI:107936]
20. P2rx6 ENSMUSG00000022758 13 0.904 - - - - 0.904 - purinergic receptor P2X, ligand-gated ion channel, 6 [Source:MGI Symbol;Acc:MGI:1337113]
21. 1600014C23Rik ENSMUSG00000094690 35 0.903 - - - - 0.903 - RIKEN cDNA 1600014C23 gene [Source:MGI Symbol;Acc:MGI:1919490]
22. A730090N16Rik ENSMUSG00000090120 19 0.903 - - - - 0.903 - RIKEN cDNA A730090N16 gene [Source:MGI Symbol;Acc:MGI:2442748]
23. Gm22791 ENSMUSG00000087857 19 0.903 - - - - 0.903 - predicted gene, 22791 [Source:MGI Symbol;Acc:MGI:5452568]
24. Gm16712 ENSMUSG00000097077 14 0.903 - - - - 0.903 - predicted gene, 16712 [Source:MGI Symbol;Acc:MGI:4439636]
25. Ltk ENSMUSG00000027297 12 0.903 - - - - 0.903 - leukocyte tyrosine kinase [Source:MGI Symbol;Acc:MGI:96840]
26. Gm6169 ENSMUSG00000057762 16 0.902 - - - - - 0.902 predicted gene 6169 [Source:MGI Symbol;Acc:MGI:3646298]
27. Ier5l ENSMUSG00000089762 201 0.901 - - - - 0.901 - immediate early response 5-like [Source:MGI Symbol;Acc:MGI:1919750]
28. 3110021N24Rik ENSMUSG00000094958 110 0.901 - - - - - 0.901 RIKEN cDNA 3110021N24 gene [Source:MGI Symbol;Acc:MGI:1920383]
29. Gm15613 ENSMUSG00000080753 37 0.9 - - - - - 0.900 predicted gene 15613 [Source:MGI Symbol;Acc:MGI:3783058]
30. Btn1a1 ENSMUSG00000000706 24 0.899 - - - - 0.899 - butyrophilin, subfamily 1, member A1 [Source:MGI Symbol;Acc:MGI:103118]
31. Ttll13 ENSMUSG00000045467 27 0.898 - - - - 0.898 - tubulin tyrosine ligase-like family, member 13 [Source:MGI Symbol;Acc:MGI:1920845]
32. Gm26807 ENSMUSG00000097484 14 0.898 - - - - 0.898 - predicted gene, 26807 [Source:MGI Symbol;Acc:MGI:5477301]
33. Stmnd1 ENSMUSG00000063529 14 0.897 - - - - 0.897 - stathmin domain containing 1 [Source:MGI Symbol;Acc:MGI:2686420]
34. Gm26606 ENSMUSG00000097337 23 0.895 - - - - 0.895 - predicted gene, 26606 [Source:MGI Symbol;Acc:MGI:5477100]
35. Epyc ENSMUSG00000019936 32 0.894 - - - - 0.894 - epiphycan [Source:MGI Symbol;Acc:MGI:107942]
36. Shf ENSMUSG00000033256 192 0.894 - - - - 0.894 - Src homology 2 domain containing F [Source:MGI Symbol;Acc:MGI:3613669]
37. Apba1 ENSMUSG00000024897 107 0.894 - - - - 0.894 - amyloid beta (A4) precursor protein binding, family A, member 1 [Source:MGI Symbol;Acc:MGI:1860297]
38. Cr2 ENSMUSG00000026616 16 0.892 - - - - 0.892 - complement receptor 2 [Source:MGI Symbol;Acc:MGI:88489]
39. Sep-04 Sep-04 178 0.892 - - - - 0.892 -
40. Gm14391 ENSMUSG00000078903 51 0.891 - - - - 0.891 - predicted gene 14391 [Source:MGI Symbol;Acc:MGI:3709324]
41. Glcci1 ENSMUSG00000029638 55 0.89 - - - - 0.890 - glucocorticoid induced transcript 1 [Source:MGI Symbol;Acc:MGI:2179717]
42. Sytl1 ENSMUSG00000028860 26 0.889 - - - - 0.889 - synaptotagmin-like 1 [Source:MGI Symbol;Acc:MGI:1933365]
43. Gm9999 ENSMUSG00000056509 10 0.888 - - - - - 0.888 predicted gene 9999 [Source:MGI Symbol;Acc:MGI:3642801]
44. 1700001L05Rik ENSMUSG00000075511 15 0.887 - - - - - 0.887 RIKEN cDNA 1700001L05 gene [Source:MGI Symbol;Acc:MGI:1916541]
45. Gm25177 ENSMUSG00000084583 50 0.886 - - - - - 0.886 predicted gene, 25177 [Source:MGI Symbol;Acc:MGI:5454954]
46. 2010110K18Rik ENSMUSG00000097755 62 0.886 - - - - - 0.886 RIKEN cDNA 2010110K18 gene [Source:MGI Symbol;Acc:MGI:1922951]
47. Mrs2 ENSMUSG00000021339 104 0.885 - - - - 0.885 - MRS2 magnesium transporter [Source:MGI Symbol;Acc:MGI:2685748]
48. Dpp4 ENSMUSG00000035000 65 0.883 - - - - - 0.883 dipeptidylpeptidase 4 [Source:MGI Symbol;Acc:MGI:94919]
49. 4933438K21Rik ENSMUSG00000093617 64 0.883 - - - - 0.883 - RIKEN cDNA 4933438K21 gene [Source:MGI Symbol;Acc:MGI:1918520]
50. Gm22813 ENSMUSG00000105450, ENSMUSG00000105886 91 0.883 - - - - - 0.883 predicted gene, 22813 [Source:MGI Symbol;Acc:MGI:5452590]
51. Gm20448 Gm20448 48 0.882 - - - - 0.882 -
52. Fam13b ENSMUSG00000036501 75 0.881 - - - - 0.881 - family with sequence similarity 13, member B [Source:MGI Symbol;Acc:MGI:2447834]
53. Lyst ENSMUSG00000019726 99 0.881 - - - - 0.881 - lysosomal trafficking regulator [Source:MGI Symbol;Acc:MGI:107448]
54. Phykpl ENSMUSG00000020359 114 0.88 - - - - 0.880 - 5-phosphohydroxy-L-lysine phospholyase [Source:MGI Symbol;Acc:MGI:1920197]
55. Pgm3 ENSMUSG00000056131 59 0.88 - - - - - 0.880 phosphoglucomutase 3 [Source:MGI Symbol;Acc:MGI:97566]
56. P2ry14 ENSMUSG00000036381 17 0.88 - - - - - 0.880 purinergic receptor P2Y, G-protein coupled, 14 [Source:MGI Symbol;Acc:MGI:2155705]
57. Aox1 ENSMUSG00000063558 17 0.879 - - - - 0.879 - aldehyde oxidase 1 [Source:MGI Symbol;Acc:MGI:88035]
58. Leprel1 Leprel1 49 0.879 - - - - - 0.879
59. Pcdhb3 ENSMUSG00000045498 48 0.878 - - - - 0.878 - protocadherin beta 3 [Source:MGI Symbol;Acc:MGI:2136737]
60. Nup210l ENSMUSG00000027939 61 0.875 - - - - - 0.875 nucleoporin 210-like [Source:MGI Symbol;Acc:MGI:1924845]
61. Gm15843 ENSMUSG00000085812 90 0.875 - - - - 0.875 - predicted gene 15843 [Source:MGI Symbol;Acc:MGI:3801845]
62. Adra2a ENSMUSG00000033717 147 0.874 - - - - - 0.874 adrenergic receptor, alpha 2a [Source:MGI Symbol;Acc:MGI:87934]
63. Atp10a ENSMUSG00000025324 152 0.874 - - - - 0.874 - ATPase, class V, type 10A [Source:MGI Symbol;Acc:MGI:1330809]
64. Zfp53 ENSMUSG00000057409 96 0.873 - - 0.873 - - - zinc finger protein 53 [Source:MGI Symbol;Acc:MGI:99200]
65. Lrrc2 ENSMUSG00000032495 179 0.873 - - - - - 0.873 leucine rich repeat containing 2 [Source:MGI Symbol;Acc:MGI:1921499]
66. Gm14127 ENSMUSG00000082740 101 0.871 - - - - - 0.871 predicted gene 14127 [Source:MGI Symbol;Acc:MGI:3652004]
67. 9130017K11Rik ENSMUSG00000055134 33 0.871 - - - - - 0.871 RIKEN cDNA 9130017K11 gene [Source:MGI Symbol;Acc:MGI:1926030]
68. Pemt ENSMUSG00000000301 45 0.871 - - 0.871 - - - phosphatidylethanolamine N-methyltransferase [Source:MGI Symbol;Acc:MGI:104535]
69. C1ra ENSMUSG00000055172 76 0.87 - - - - - 0.870 complement component 1, r subcomponent A [Source:MGI Symbol;Acc:MGI:1355313]
70. Sh3bp2 ENSMUSG00000054520 148 0.87 - - - - 0.870 - SH3-domain binding protein 2 [Source:MGI Symbol;Acc:MGI:1346349]
71. Gm8773 ENSMUSG00000073234 31 0.867 - - - - - 0.867 predicted gene 8773 [Source:MGI Symbol;Acc:MGI:3646213]
72. Igkv9-123 ENSMUSG00000076512 77 0.867 - - - - - 0.867 immunoglobulin kappa variable 9-123 [Source:MGI Symbol;Acc:MGI:3643848]
73. Gm17388 Gm17388 500 0.865 - - - - - 0.865
74. Apom ENSMUSG00000024391 200 0.862 - - - - - 0.862 apolipoprotein M [Source:MGI Symbol;Acc:MGI:1930124]
75. Gm25304 Gm25304 44 0.862 - - - - 0.862 -
76. Spt1 Spt1 55 0.862 - - - - 0.862 -
77. Smim22 ENSMUSG00000096215 66 0.859 - - - - - 0.859 small integral membrane protein 22 [Source:MGI Symbol;Acc:MGI:3643379]
78. Gm17541 ENSMUSG00000091732 261 0.857 - - - - 0.857 - predicted gene, 17541 [Source:MGI Symbol;Acc:MGI:4937175]
79. Slc22a3 ENSMUSG00000023828 78 0.856 - - - - 0.856 - solute carrier family 22 (organic cation transporter), member 3 [Source:MGI Symbol;Acc:MGI:1333817]
80. Gabra1 ENSMUSG00000010803 177 0.855 - - - - - 0.855 gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
81. Gm7658 ENSMUSG00000082935 223 0.854 - - - - 0.854 - predicted gene 7658 [Source:MGI Symbol;Acc:MGI:3648029]
82. 6330403A02Rik 6330403A02Rik 84 0.851 - - - - - 0.851
83. Clec4a1 ENSMUSG00000049037 53 0.847 - - - - - 0.847 C-type lectin domain family 4, member a1 [Source:MGI Symbol;Acc:MGI:3036291]
84. Mical3 ENSMUSG00000051586 377 0.847 - - - - - 0.847 microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:MGI Symbol;Acc:MGI:2442733]
85. Tsku ENSMUSG00000049580 103 0.845 - - - - - 0.845 tsukushi, small leucine rich proteoglycan [Source:MGI Symbol;Acc:MGI:2443855]
86. Nfix ENSMUSG00000001911 82 0.844 - - - - - 0.844 nuclear factor I/X [Source:MGI Symbol;Acc:MGI:97311]
87. Vsnl1 ENSMUSG00000054459 52 0.843 - - - - 0.843 - visinin-like 1 [Source:MGI Symbol;Acc:MGI:1349453]
88. Tubg2 ENSMUSG00000045007 44 0.843 - - - - 0.843 - tubulin, gamma 2 [Source:MGI Symbol;Acc:MGI:2144208]
89. Tmed8 ENSMUSG00000034111 381 0.842 - - - - - 0.842 transmembrane p24 trafficking protein 8 [Source:MGI Symbol;Acc:MGI:1923480]
90. Rxfp2 ENSMUSG00000053368 56 0.841 - - - - 0.841 - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
91. Relb ENSMUSG00000002983 1128 0.839 - - - - 0.839 - avian reticuloendotheliosis viral (v-rel) oncogene related B [Source:MGI Symbol;Acc:MGI:103289]
92. Ppp1r36 ENSMUSG00000052221 97 0.838 - - - - 0.838 - protein phosphatase 1, regulatory subunit 36 [Source:MGI Symbol;Acc:MGI:2684916]
93. Nat2 ENSMUSG00000051147 123 0.837 - - - - 0.837 - N-acetyltransferase 2 (arylamine N-acetyltransferase) [Source:MGI Symbol;Acc:MGI:109201]
94. Ccdc78 ENSMUSG00000071202 90 0.837 - - - - 0.837 - coiled-coil domain containing 78 [Source:MGI Symbol;Acc:MGI:2685784]
95. Oxsm ENSMUSG00000021786 115 0.836 - - - - 0.836 - 3-oxoacyl-ACP synthase, mitochondrial [Source:MGI Symbol;Acc:MGI:1918397]
96. 2510046G10Rik ENSMUSG00000066175 41 0.832 - - - - - 0.832 RIKEN cDNA 2510046G10 gene [Source:MGI Symbol;Acc:MGI:3698051]
97. Aff2 ENSMUSG00000031189 271 0.83 - - - - 0.830 - AF4/FMR2 family, member 2 [Source:MGI Symbol;Acc:MGI:1202294]
98. Ccdc106 ENSMUSG00000035228 331 0.829 - - - - - 0.829 coiled-coil domain containing 106 [Source:MGI Symbol;Acc:MGI:2385900]
99. Mettl24 ENSMUSG00000045555 62 0.828 - - - - 0.828 - methyltransferase like 24 [Source:MGI Symbol;Acc:MGI:3045338]
100. Mgmt ENSMUSG00000054612 134 0.828 - - - - 0.828 - O-6-methylguanine-DNA methyltransferase [Source:MGI Symbol;Acc:MGI:96977]

There are 151 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA