Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Atxn1

Gene Name Gene ID Reads Annotation
Atxn1 ENSMUSG00000046876 234 ataxin 1 [Source:MGI Symbol;Acc:MGI:104783]







Genes with expression patterns similar to Atxn1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Atxn1 ENSMUSG00000046876 234 6 1.000 1.000 1.000 1.000 1.000 1.000 ataxin 1 [Source:MGI Symbol;Acc:MGI:104783]
2. Acsl1 ENSMUSG00000018796 208 0.843 - - 0.843 - - - acyl-CoA synthetase long-chain family member 1 [Source:MGI Symbol;Acc:MGI:102797]
3. Thap4 ENSMUSG00000026279 269 0.808 - - 0.808 - - - THAP domain containing 4 [Source:MGI Symbol;Acc:MGI:1914276]
4. Ppp3r2 ENSMUSG00000028310 20 0.801 - - - - 0.801 - protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II) [Source:MGI Symbol;Acc:MGI:107171]
5. Gm8991 ENSMUSG00000059179 90 0.78 - - - - 0.780 - predicted pseudogene 8991 [Source:MGI Symbol;Acc:MGI:3644227]
6. 2210417K05Rik 2210417K05Rik 42 0.78 - - - - 0.780 -
7. Pmm2 ENSMUSG00000022711 580 0.774 - - - - 0.774 - phosphomannomutase 2 [Source:MGI Symbol;Acc:MGI:1859214]
8. AA467197 ENSMUSG00000033213, ENSMUSG00000110868 7 0.772 - - - - - 0.772 expressed sequence AA467197 [Source:MGI Symbol;Acc:MGI:3034182]
9. 2010012P19Rik 2010012P19Rik 39 0.771 - - - - 0.771 -
10. Gm26606 ENSMUSG00000097337 23 0.77 - - - - - 0.770 predicted gene, 26606 [Source:MGI Symbol;Acc:MGI:5477100]
11. Zfp688 ENSMUSG00000045251 349 0.769 - - 0.769 - - - zinc finger protein 688 [Source:MGI Symbol;Acc:MGI:1916484]
12. Rai2 ENSMUSG00000043518 113 0.767 - - 0.767 - - - retinoic acid induced 2 [Source:MGI Symbol;Acc:MGI:1344378]
13. Gm27001 ENSMUSG00000097963 3 0.766 - - - - - 0.766 predicted gene, 27001 [Source:MGI Symbol;Acc:MGI:5504116]
14. 3110099E03Rik ENSMUSG00000085582 57 0.766 - - - - - 0.766 RIKEN cDNA 3110099E03 gene [Source:MGI Symbol;Acc:MGI:1925761]
15. Gm15366 ENSMUSG00000080726 11 0.766 - - - - - 0.766 predicted gene 15366 [Source:MGI Symbol;Acc:MGI:3709611]
16. Plcd4 ENSMUSG00000026173 6 0.766 - - - - - 0.766 phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
17. Capn15 ENSMUSG00000037326 23 0.766 - - - - - 0.766 calpain 15 [Source:MGI Symbol;Acc:MGI:1355075]
18. Rplp0-ps1 ENSMUSG00000081640 5 0.766 - - - - - 0.766 ribosomal protein, large, P0, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3648599]
19. Avpr1b ENSMUSG00000026432 4 0.766 - - - - - 0.766 arginine vasopressin receptor 1B [Source:MGI Symbol;Acc:MGI:1347010]
20. Rpl17-ps5 ENSMUSG00000081855 19 0.766 - - - - - 0.766 ribosomal protein L17, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3704246]
21. Gm13604 ENSMUSG00000083910 10 0.766 - - - - - 0.766 predicted gene 13604 [Source:MGI Symbol;Acc:MGI:3652203]
22. Casp4 ENSMUSG00000033538 15 0.766 - - - - - 0.766 caspase 4, apoptosis-related cysteine peptidase [Source:MGI Symbol;Acc:MGI:107700]
23. D5Ertd577e ENSMUSG00000070677 7 0.766 - - - - - 0.766 DNA segment, Chr 5, ERATO Doi 577, expressed [Source:MGI Symbol;Acc:MGI:1261918]
24. Gm2108 ENSMUSG00000092031 8 0.766 - - - - - 0.766 predicted gene 2108 [Source:MGI Symbol;Acc:MGI:3780276]
25. Gm22299 ENSMUSG00000064597, ENSMUSG00000116186 14 0.766 - - - - - 0.766 predicted gene, 22299 [Source:MGI Symbol;Acc:MGI:5452076]
26. 5430403G16Rik ENSMUSG00000072763 285 0.762 - - - - 0.762 - RIKEN cDNA 5430403G16 gene [Source:MGI Symbol;Acc:MGI:1924450]
27. Mir138-1 ENSMUSG00000065414 14 0.761 - - - - - 0.761 microRNA 138-1 [Source:MGI Symbol;Acc:MGI:2676823]
28. Ly6a ENSMUSG00000075602 17 0.761 - - - - - 0.761 lymphocyte antigen 6 complex, locus A [Source:MGI Symbol;Acc:MGI:107527]
29. Grin2d ENSMUSG00000002771 119 0.757 - - - - 0.757 - glutamate receptor, ionotropic, NMDA2D (epsilon 4) [Source:MGI Symbol;Acc:MGI:95823]
30. Ccm2l ENSMUSG00000027474 175 0.754 - - - - 0.754 - cerebral cavernous malformation 2-like [Source:MGI Symbol;Acc:MGI:2385159]
31. F10 ENSMUSG00000031444 51 0.752 - - - - 0.752 - coagulation factor X [Source:MGI Symbol;Acc:MGI:103107]
32. Adam28 ENSMUSG00000014725 407 0.751 - - 0.751 - - - a disintegrin and metallopeptidase domain 28 [Source:MGI Symbol;Acc:MGI:105988]
33. Slc39a8 ENSMUSG00000053897 431 0.749 - - 0.749 - - - solute carrier family 39 (metal ion transporter), member 8 [Source:MGI Symbol;Acc:MGI:1914797]
34. Gm15915 ENSMUSG00000085723 101 0.749 - - - - 0.749 - predicted gene 15915 [Source:MGI Symbol;Acc:MGI:3801763]
35. Clcf1 ENSMUSG00000040663, ENSMUSG00000097629 185 0.748 - - - - 0.748 - cardiotrophin-like cytokine factor 1 [Source:MGI Symbol;Acc:MGI:1930088]
36. Siae ENSMUSG00000001942 223 0.748 - - - - - 0.748 sialic acid acetylesterase [Source:MGI Symbol;Acc:MGI:104803]
37. Cnn1 ENSMUSG00000001349 296 0.747 - - - - 0.747 - calponin 1 [Source:MGI Symbol;Acc:MGI:104979]
38. Kcna4 ENSMUSG00000042604 14 0.747 - - - - - 0.747 potassium voltage-gated channel, shaker-related subfamily, member 4 [Source:MGI Symbol;Acc:MGI:96661]
39. Gm24576 ENSMUSG00000093249 66 0.747 - - - - - 0.747 predicted gene, 24576 [Source:MGI Symbol;Acc:MGI:5454353]
40. Zfp398 ENSMUSG00000062519 315 0.743 - - 0.743 - - - zinc finger protein 398 [Source:MGI Symbol;Acc:MGI:1917856]
41. Col28a1 ENSMUSG00000068794 6 0.741 - - - - - 0.741 collagen, type XXVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:2685312]
42. Kynu ENSMUSG00000026866 84 0.741 - - - - - 0.741 kynureninase (L-kynurenine hydrolase) [Source:MGI Symbol;Acc:MGI:1918039]
43. Rad52 ENSMUSG00000030166 681 0.739 - - 0.739 - - - RAD52 homolog, DNA repair protein [Source:MGI Symbol;Acc:MGI:101949]
44. Mmp28 ENSMUSG00000020682 22 0.737 - - - - - 0.737 matrix metallopeptidase 28 (epilysin) [Source:MGI Symbol;Acc:MGI:2153062]
45. Sorcs3 ENSMUSG00000063434 109 0.737 - - - - 0.737 - sortilin-related VPS10 domain containing receptor 3 [Source:MGI Symbol;Acc:MGI:1913923]
46. Scnn1g ENSMUSG00000000216 14 0.736 - - - - - 0.736 sodium channel, nonvoltage-gated 1 gamma [Source:MGI Symbol;Acc:MGI:104695]
47. Ephx2 ENSMUSG00000022040 157 0.736 - - - - 0.736 - epoxide hydrolase 2, cytoplasmic [Source:MGI Symbol;Acc:MGI:99500]
48. 2900079G21Rik ENSMUSG00000087038 5 0.736 - - - - - 0.736 RIKEN cDNA 2900079G21 gene [Source:MGI Symbol;Acc:MGI:1920268]
49. Gm9143 ENSMUSG00000080774 40 0.735 - - - - - 0.735 predicted gene 9143 [Source:MGI Symbol;Acc:MGI:3643265]
50. Gm9530 ENSMUSG00000096950 38 0.735 - - - - 0.735 - predicted gene 9530 [Source:MGI Symbol;Acc:MGI:3779939]
51. Htr3b ENSMUSG00000008590 22 0.732 - - - - 0.732 - 5-hydroxytryptamine (serotonin) receptor 3B [Source:MGI Symbol;Acc:MGI:1861899]
52. Serpine2 ENSMUSG00000026249 1242 0.732 - - - - - 0.732 serine (or cysteine) peptidase inhibitor, clade E, member 2 [Source:MGI Symbol;Acc:MGI:101780]
53. Gm17034 ENSMUSG00000090293 10 0.73 - - - - 0.730 - predicted gene 17034 [Source:MGI Symbol;Acc:MGI:4937861]
54. Gm5937 ENSMUSG00000081622 17 0.73 - - - - 0.730 - predicted gene 5937 [Source:MGI Symbol;Acc:MGI:3648844]
55. 5730460C07Rik ENSMUSG00000062046 10 0.73 - - - - 0.730 - RIKEN cDNA 5730460C07 gene [Source:MGI Symbol;Acc:MGI:1917844]
56. Snora15 ENSMUSG00000093413 13 0.73 - - - - 0.730 - small nucleolar RNA, H/ACA box 15 [Source:MGI Symbol;Acc:MGI:3819490]
57. 2310042E22Rik 2310042E22Rik 17 0.73 - - - - 0.730 -
58. Fgf5 ENSMUSG00000029337 249 0.73 - - - - - 0.730 fibroblast growth factor 5 [Source:MGI Symbol;Acc:MGI:95519]
59. Gm1818 ENSMUSG00000091277 184 0.727 - - 0.727 - - - predicted gene 1818 [Source:MGI Symbol;Acc:MGI:3037676]
60. 4930430E12Rik ENSMUSG00000085295 30 0.726 - - - - 0.726 - RIKEN cDNA 4930430E12 gene [Source:MGI Symbol;Acc:MGI:1918889]
61. Diras2 ENSMUSG00000047842 90 0.726 - - - - 0.726 - DIRAS family, GTP-binding RAS-like 2 [Source:MGI Symbol;Acc:MGI:1915453]
62. Cd79a ENSMUSG00000003379 33 0.726 - - - - 0.726 - CD79A antigen (immunoglobulin-associated alpha) [Source:MGI Symbol;Acc:MGI:101774]
63. Ttll9 ENSMUSG00000074673 21 0.726 - - - - 0.726 - tubulin tyrosine ligase-like family, member 9 [Source:MGI Symbol;Acc:MGI:1913589]
64. Rims3 ENSMUSG00000032890 146 0.725 - - - - 0.725 - regulating synaptic membrane exocytosis 3 [Source:MGI Symbol;Acc:MGI:2443331]
65. Surf1 ENSMUSG00000015790 287 0.724 - - 0.724 - - - surfeit gene 1 [Source:MGI Symbol;Acc:MGI:98443]
66. Dmbx1 ENSMUSG00000028707 18 0.724 - - - - 0.724 - diencephalon/mesencephalon homeobox 1 [Source:MGI Symbol;Acc:MGI:2153518]
67. Phf1 ENSMUSG00000024193 65 0.724 - - - - 0.724 - PHD finger protein 1 [Source:MGI Symbol;Acc:MGI:98647]
68. Cd37 ENSMUSG00000030798 29 0.723 - - - - 0.723 - CD37 antigen [Source:MGI Symbol;Acc:MGI:88330]
69. Ptger2 ENSMUSG00000037759 22 0.722 - - - - - 0.722 prostaglandin E receptor 2 (subtype EP2) [Source:MGI Symbol;Acc:MGI:97794]
70. F730043M19Rik ENSMUSG00000052125 217 0.722 - - - - 0.722 - RIKEN cDNA F730043M19 gene [Source:MGI Symbol;Acc:MGI:2443237]
71. Gm7429 ENSMUSG00000082260 31 0.722 - - - - 0.722 - predicted pseudogene 7429 [Source:MGI Symbol;Acc:MGI:3647718]
72. Gm6155 ENSMUSG00000068629 16 0.72 - - - - 0.720 - predicted pseudogene 6155 [Source:MGI Symbol;Acc:MGI:3643981]
73. Gm15905 ENSMUSG00000085993 17 0.72 - - - - 0.720 - predicted gene 15905 [Source:MGI Symbol;Acc:MGI:3802059]
74. Sertad3 ENSMUSG00000055200 231 0.72 - - - - 0.720 - SERTA domain containing 3 [Source:MGI Symbol;Acc:MGI:2180697]
75. 6530401F13Rik ENSMUSG00000091947 13 0.719 - - - - 0.719 - RIKEN cDNA 6530401F13 gene [Source:MGI Symbol;Acc:MGI:1923491]
76. Foxr1 ENSMUSG00000074397 30 0.719 - - - - 0.719 - forkhead box R1 [Source:MGI Symbol;Acc:MGI:2685961]
77. Hist1h2ad ENSMUSG00000071478 18 0.719 - - - - - 0.719 histone cluster 1, H2ad [Source:MGI Symbol;Acc:MGI:2448289]
78. Mfsd7b 498 0.719 - - - - 0.719 - major facilitator superfamily domain containing 7B, transcript variant X1
79. 2510046G10Rik ENSMUSG00000066175 41 0.718 - - - - 0.718 - RIKEN cDNA 2510046G10 gene [Source:MGI Symbol;Acc:MGI:3698051]
80. Mak ENSMUSG00000021363 50 0.717 - - - - - 0.717 male germ cell-associated kinase [Source:MGI Symbol;Acc:MGI:96913]
81. Agtr1a ENSMUSG00000049115 80 0.717 - - - - 0.717 - angiotensin II receptor, type 1a [Source:MGI Symbol;Acc:MGI:87964]
82. Snta1 ENSMUSG00000027488 128 0.717 - - - - 0.717 - syntrophin, acidic 1 [Source:MGI Symbol;Acc:MGI:101772]
83. Sim2 ENSMUSG00000062713 63 0.716 - - - - - 0.716 single-minded family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:98307]
84. Hist1h2ab ENSMUSG00000061615 94 0.716 - - - - 0.716 - histone cluster 1, H2ab [Source:MGI Symbol;Acc:MGI:2448306]
85. Mettl10 906 0.715 - - - - 0.715 - methyltransferase like 10, transcript variant X5
86. Slc45a4 ENSMUSG00000079020 632 0.715 - - - - 0.715 - solute carrier family 45, member 4 [Source:MGI Symbol;Acc:MGI:2146236]
87. Gm22388 ENSMUSG00000088819 259 0.714 - - - - 0.714 - predicted gene, 22388 [Source:MGI Symbol;Acc:MGI:5452165]
88. Myo1d ENSMUSG00000035441 177 0.713 - - - - 0.713 - myosin ID [Source:MGI Symbol;Acc:MGI:107728]
89. Csn3 ENSMUSG00000001622 90 0.713 - - - - 0.713 - casein kappa [Source:MGI Symbol;Acc:MGI:107461]
90. Plk2 ENSMUSG00000021701 1249 0.713 - - - - 0.713 - polo like kinase 2 [Source:MGI Symbol;Acc:MGI:1099790]
91. Il17b ENSMUSG00000024578 68 0.712 - - - - - 0.712 interleukin 17B [Source:MGI Symbol;Acc:MGI:1928397]
92. Tmem150c ENSMUSG00000050640 52 0.712 - - - - - 0.712 transmembrane protein 150C [Source:MGI Symbol;Acc:MGI:3041258]
93. Spats2l ENSMUSG00000038305 220 0.712 - - 0.712 - - - spermatogenesis associated, serine-rich 2-like [Source:MGI Symbol;Acc:MGI:1914448]
94. Irs1 ENSMUSG00000055980 207 0.711 - - - - 0.711 - insulin receptor substrate 1 [Source:MGI Symbol;Acc:MGI:99454]
95. Fam83g ENSMUSG00000042377 44 0.71 - - - - 0.710 - family with sequence similarity 83, member G [Source:MGI Symbol;Acc:MGI:1916890]
96. Gm9294 ENSMUSG00000044609 103 0.709 - - - - 0.709 - predicted pseudogene 9294 [Source:MGI Symbol;Acc:MGI:3648888]
97. Gm7879 ENSMUSG00000033036 6 0.709 - - - - - 0.709 predicted pseudogene 7879 [Source:MGI Symbol;Acc:MGI:3645078]
98. Gm10177 ENSMUSG00000090136 864 0.709 - - - - - 0.709 predicted gene 10177 [Source:MGI Symbol;Acc:MGI:3704330]
99. Rps3a3 ENSMUSG00000059751 396 0.708 - - 0.708 - - - ribosomal protein S3A3 [Source:MGI Symbol;Acc:MGI:3643406]
100. Myh7b ENSMUSG00000074652 24 0.707 - - - - - 0.707 myosin, heavy chain 7B, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:3710243]

There are 8 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA