Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Atoh1

Gene Name Gene ID Reads Annotation
Atoh1 ENSMUSG00000073043 396 atonal bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104654]







Genes with expression patterns similar to Atoh1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Atoh1 ENSMUSG00000073043 396 6 1.000 1.000 1.000 1.000 1.000 1.000 atonal bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104654]
2. Barhl1 ENSMUSG00000026805 447 4.64 0.901 0.984 0.999 0.980 0.776 - BarH like homeobox 1 [Source:MGI Symbol;Acc:MGI:1859288]
3. Wnt1 ENSMUSG00000022997 961 3.954 0.981 0.992 1.000 0.981 - - wingless-type MMTV integration site family, member 1 [Source:MGI Symbol;Acc:MGI:98953]
4. Wnt3a ENSMUSG00000009900 70 3.557 0.964 0.744 1.000 - - 0.849 wingless-type MMTV integration site family, member 3A [Source:MGI Symbol;Acc:MGI:98956]
5. Igfbpl1 ENSMUSG00000035551 856 3.412 0.866 0.829 0.921 - 0.796 - insulin-like growth factor binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1933198]
6. Barhl2 ENSMUSG00000034384 99 3.396 0.901 0.996 - 0.790 0.709 - BarH like homeobox 2 [Source:MGI Symbol;Acc:MGI:1859314]
7. Olig3 ENSMUSG00000045591 1049 3.238 0.874 0.764 0.853 - - 0.747 oligodendrocyte transcription factor 3 [Source:MGI Symbol;Acc:MGI:2149955]
8. Rassf4 ENSMUSG00000042129 1399 2.647 - 0.897 0.951 0.799 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:MGI Symbol;Acc:MGI:2386853]
9. Lmx1a ENSMUSG00000026686 123 2.625 0.909 0.813 0.903 - - - LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]
10. Rnd2 ENSMUSG00000001313 5207 2.302 - 0.725 0.708 0.869 - - Rho family GTPase 2 [Source:MGI Symbol;Acc:MGI:1338755]
11. 2610035F20Rik ENSMUSG00000085555 139 2.191 0.716 0.714 - - 0.761 - RIKEN cDNA 2610035F20 gene [Source:MGI Symbol;Acc:MGI:1916498]
12. Ddn ENSMUSG00000059213 51 1.97 - - 1.000 0.970 - - dendrin [Source:MGI Symbol;Acc:MGI:108101]
13. Gm15366 ENSMUSG00000080726 11 1.887 0.901 - 0.986 - - - predicted gene 15366 [Source:MGI Symbol;Acc:MGI:3709611]
14. Pla2g7 ENSMUSG00000023913 28 1.843 0.858 - 0.985 - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:MGI Symbol;Acc:MGI:1351327]
15. Cntnap2 ENSMUSG00000039419 230 1.764 0.804 - 0.960 - - - contactin associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1914047]
16. Slc15a1 ENSMUSG00000025557 5 1.721 - 0.887 - 0.834 - - solute carrier family 15 (oligopeptide transporter), member 1 [Source:MGI Symbol;Acc:MGI:1861376]
17. Casz1 ENSMUSG00000028977 921 1.716 0.852 0.864 - - - - castor zinc finger 1 [Source:MGI Symbol;Acc:MGI:1196251]
18. Rspo3 ENSMUSG00000019880 485 1.71 0.822 - 0.888 - - - R-spondin 3 [Source:MGI Symbol;Acc:MGI:1920030]
19. Zfp663 ENSMUSG00000056824 62 1.708 - 0.744 0.964 - - - zinc finger protein 663 [Source:MGI Symbol;Acc:MGI:2685854]
20. Pard6a ENSMUSG00000005699 236 1.658 - - 0.921 0.737 - - par-6 family cell polarity regulator alpha [Source:MGI Symbol;Acc:MGI:1927223]
21. Adamts8 ENSMUSG00000031994 98 1.645 0.778 - 0.867 - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8 [Source:MGI Symbol;Acc:MGI:1353468]
22. Dcc ENSMUSG00000060534 107 1.615 0.826 - - 0.789 - - deleted in colorectal carcinoma [Source:MGI Symbol;Acc:MGI:94869]
23. Zic5 ENSMUSG00000041703 1240 1.612 0.709 - 0.903 - - - zinc finger protein of the cerebellum 5 [Source:MGI Symbol;Acc:MGI:1929518]
24. Rftn1 ENSMUSG00000039316 375 1.594 0.729 - 0.865 - - - raftlin lipid raft linker 1 [Source:MGI Symbol;Acc:MGI:1923688]
25. Nog ENSMUSG00000048616 101 1.582 0.867 0.715 - - - - noggin [Source:MGI Symbol;Acc:MGI:104327]
26. Dlgap3 ENSMUSG00000042388 56 1.57 0.832 0.738 - - - - DLG associated protein 3 [Source:MGI Symbol;Acc:MGI:3039563]
27. Adcyap1r1 ENSMUSG00000029778 817 1.566 - 0.849 - 0.717 - - adenylate cyclase activating polypeptide 1 receptor 1 [Source:MGI Symbol;Acc:MGI:108449]
28. Msx3 ENSMUSG00000025469 236 1.55 - - 0.835 0.715 - - msh homeobox 3 [Source:MGI Symbol;Acc:MGI:106587]
29. Tmem163 ENSMUSG00000026347 282 1.549 - - - 0.835 0.714 - transmembrane protein 163 [Source:MGI Symbol;Acc:MGI:1919410]
30. Hoxb3os ENSMUSG00000084844 82 1.542 0.781 - 0.761 - - - homeobox B3 and homeobox B2, opposite strand [Source:MGI Symbol;Acc:MGI:103211]
31. Pou3f1 ENSMUSG00000090125 496 1.542 - - 0.826 - 0.716 - POU domain, class 3, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101896]
32. Fzd10 ENSMUSG00000081683 998 1.485 - 0.722 - - - 0.763 frizzled class receptor 10 [Source:MGI Symbol;Acc:MGI:2136761]
33. Slc35f1 ENSMUSG00000038602 342 1.477 0.754 - - - 0.723 - solute carrier family 35, member F1 [Source:MGI Symbol;Acc:MGI:2139810]
34. Wnt3 ENSMUSG00000000125 142 1.464 - - - 0.727 0.737 - wingless-type MMTV integration site family, member 3 [Source:MGI Symbol;Acc:MGI:98955]
35. Fgf15 ENSMUSG00000031073 527 1.427 - - - 0.724 - 0.703 fibroblast growth factor 15 [Source:MGI Symbol;Acc:MGI:1096383]
36. Gm16585 ENSMUSG00000089657 13 1 - - 1.000 - - - predicted gene 16585 [Source:MGI Symbol;Acc:MGI:4415005]
37. Gm12412 ENSMUSG00000083685 7 1 - - 1.000 - - - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
38. Gm24611 ENSMUSG00000065206 4 1 - - 1.000 - - - predicted gene, 24611 [Source:MGI Symbol;Acc:MGI:5454388]
39. Ccr9 ENSMUSG00000029530 12 1 - - 1.000 - - - chemokine (C-C motif) receptor 9 [Source:MGI Symbol;Acc:MGI:1341902]
40. 3100002H09Rik ENSMUSG00000051219 11 0.999 - - 0.999 - - - RIKEN cDNA 3100002H09 gene [Source:MGI Symbol;Acc:MGI:1917499]
41. Nlrc4 ENSMUSG00000039193 9 0.998 - - 0.998 - - - NLR family, CARD domain containing 4 [Source:MGI Symbol;Acc:MGI:3036243]
42. Gm11280 ENSMUSG00000085393 24 0.997 - - 0.997 - - - predicted gene 11280 [Source:MGI Symbol;Acc:MGI:3705200]
43. Ddx43 ENSMUSG00000070291 17 0.997 - - 0.997 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]
44. 2310042D19Rik 2310042D19Rik 7 0.997 - - 0.997 - - -
45. Gm24049 ENSMUSG00000076364 20 0.995 - - 0.995 - - - predicted gene, 24049 [Source:MGI Symbol;Acc:MGI:5453826]
46. Gm973 ENSMUSG00000047361 11 0.994 - - 0.994 - - - predicted gene 973 [Source:MGI Symbol;Acc:MGI:2685819]
47. Gm11615 ENSMUSG00000085083 13 0.993 - - 0.993 - - - predicted gene 11615 [Source:MGI Symbol;Acc:MGI:3652280]
48. Tldc1 ENSMUSG00000034105 8 0.993 - - 0.993 - - - TBC/LysM associated domain containing 1 [Source:MGI Symbol;Acc:MGI:1921597]
49. Fn3k ENSMUSG00000025175 18 0.992 - - 0.992 - - - fructosamine 3 kinase [Source:MGI Symbol;Acc:MGI:1926834]
50. Gm14634 ENSMUSG00000085891 18 0.992 - - 0.992 - - - predicted gene 14634 [Source:MGI Symbol;Acc:MGI:3705147]
51. Hist1h2bg ENSMUSG00000058385 62 0.989 - - 0.989 - - - histone cluster 1, H2bg [Source:MGI Symbol;Acc:MGI:2448386]
52. Vcl ENSMUSG00000021823 49 0.988 - - 0.988 - - - vinculin [Source:MGI Symbol;Acc:MGI:98927]
53. Fbxo2 ENSMUSG00000041556 15 0.987 - - 0.987 - - - F-box protein 2 [Source:MGI Symbol;Acc:MGI:2446216]
54. Hectd2 ENSMUSG00000041180 34 0.986 - - 0.986 - - - HECT domain E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2442663]
55. 2010315B03Rik ENSMUSG00000074829, ENSMUSG00000098810 29 0.985 - - 0.985 - - - RIKEN cDNA 2010315B03 gene [Source:MGI Symbol;Acc:MGI:1919321]
56. Rxfp2 ENSMUSG00000053368 56 0.985 - - 0.985 - - - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
57. Rgs9 ENSMUSG00000020599 31 0.985 - - 0.985 - - - regulator of G-protein signaling 9 [Source:MGI Symbol;Acc:MGI:1338824]
58. Gm7860 ENSMUSG00000082535 15 0.984 - - 0.984 - - - predicted gene 7860 [Source:MGI Symbol;Acc:MGI:3644843]
59. Gm25635 ENSMUSG00000064609 19 0.974 - - 0.974 - - - predicted gene, 25635 [Source:MGI Symbol;Acc:MGI:5455412]
60. Gm26801 ENSMUSG00000097892 60 0.974 - - 0.974 - - - predicted gene, 26801 [Source:MGI Symbol;Acc:MGI:5477295]
61. Fam71e1 ENSMUSG00000051113 33 0.974 - - 0.974 - - - family with sequence similarity 71, member E1 [Source:MGI Symbol;Acc:MGI:1922788]
62. Gm24616 ENSMUSG00000065208 48 0.974 - - 0.974 - - - predicted gene, 24616 [Source:MGI Symbol;Acc:MGI:5454393]
63. Rccd1 ENSMUSG00000038930 21 0.974 - - 0.974 - - - RCC1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2444156]
64. Cav2 ENSMUSG00000000058 36 0.971 - - 0.971 - - - caveolin 2 [Source:MGI Symbol;Acc:MGI:107571]
65. Wdr65 Wdr65 40 0.97 - - 0.970 - - -
66. Dennd2d ENSMUSG00000027901 12 0.969 - - 0.969 - - - DENN/MADD domain containing 2D [Source:MGI Symbol;Acc:MGI:2181193]
67. Sep-01 Sep-01 32 0.968 - - 0.968 - - -
68. Wnt9a ENSMUSG00000000126 90 0.965 - - 0.965 - - - wingless-type MMTV integration site family, member 9A [Source:MGI Symbol;Acc:MGI:2446084]
69. Tmc2 ENSMUSG00000060332 36 0.961 - - 0.961 - - - transmembrane channel-like gene family 2 [Source:MGI Symbol;Acc:MGI:2151017]
70. Kcne4 ENSMUSG00000047330 52 0.961 - - 0.961 - - - potassium voltage-gated channel, Isk-related subfamily, gene 4 [Source:MGI Symbol;Acc:MGI:1891125]
71. Gm27032 ENSMUSG00000098051 80 0.96 - - 0.960 - - - predicted gene, 27032 [Source:MGI Symbol;Acc:MGI:5504147]
72. 1700030J22Rik ENSMUSG00000031847 46 0.96 - - 0.960 - - - RIKEN cDNA 1700030J22 gene [Source:MGI Symbol;Acc:MGI:1916778]
73. Hist1h3b ENSMUSG00000069267 24 0.959 - - 0.959 - - - histone cluster 1, H3b [Source:MGI Symbol;Acc:MGI:2448319]
74. Cdh20 ENSMUSG00000050840 15 0.952 0.952 - - - - - cadherin 20 [Source:MGI Symbol;Acc:MGI:1346069]
75. Syp ENSMUSG00000031144 41 0.949 - - 0.949 - - - synaptophysin [Source:MGI Symbol;Acc:MGI:98467]
76. Gm16701 ENSMUSG00000097823, ENSMUSG00000102548 29 0.949 - - 0.949 - - - predicted gene, 16701 [Source:MGI Symbol;Acc:MGI:4439625]
77. Rpsa-ps9 ENSMUSG00000082895 35 0.948 - - 0.948 - - - ribosomal protein SA, pseudogene 9 [Source:MGI Symbol;Acc:MGI:3650393]
78. Gm24316 ENSMUSG00000096731 75 0.945 - - 0.945 - - - predicted gene, 24316 [Source:MGI Symbol;Acc:MGI:5454093]
79. Ap3m2 ENSMUSG00000031539 134 0.943 - - 0.943 - - - adaptor-related protein complex 3, mu 2 subunit [Source:MGI Symbol;Acc:MGI:1929214]
80. Nr4a3 ENSMUSG00000028341 474 0.94 - - 0.940 - - - nuclear receptor subfamily 4, group A, member 3 [Source:MGI Symbol;Acc:MGI:1352457]
81. Gm13039 ENSMUSG00000083826 11 0.939 - - 0.939 - - - predicted gene 13039 [Source:MGI Symbol;Acc:MGI:3649997]
82. Exph5 ENSMUSG00000034584 69 0.938 - - 0.938 - - - exophilin 5 [Source:MGI Symbol;Acc:MGI:2443248]
83. Dync1i1 ENSMUSG00000029757 144 0.934 - - 0.934 - - - dynein cytoplasmic 1 intermediate chain 1 [Source:MGI Symbol;Acc:MGI:107743]
84. Gm5555 ENSMUSG00000083477 39 0.933 - - 0.933 - - - predicted pseudogene 5555 [Source:MGI Symbol;Acc:MGI:3648970]
85. AI836003 AI836003 97 0.932 - - 0.932 - - -
86. Scarna13 ENSMUSG00000088789 9 0.931 - - 0.931 - - - small Cajal body-specific RNA 1 [Source:MGI Symbol;Acc:MGI:4360027]
87. Vps37c ENSMUSG00000048832 399 0.93 - - 0.930 - - - vacuolar protein sorting 37C [Source:MGI Symbol;Acc:MGI:2147661]
88. Gm12840 ENSMUSG00000086320 98 0.93 - - 0.930 - - - predicted gene 12840 [Source:MGI Symbol;Acc:MGI:3650917]
89. A130049A11Rik A130049A11Rik 44 0.927 - - 0.927 - - -
90. Rnase9 ENSMUSG00000052382 3 0.924 0.924 - - - - - ribonuclease, RNase A family, 9 (non-active) [Source:MGI Symbol;Acc:MGI:3057273]
91. Gucy2d ENSMUSG00000074003 1 0.924 0.924 - - - - - guanylate cyclase 2d [Source:MGI Symbol;Acc:MGI:106030]
92. Gm7857 ENSMUSG00000082655 4 0.924 0.924 - - - - - predicted gene 7857 [Source:MGI Symbol;Acc:MGI:3644849]
93. Gm26851 ENSMUSG00000096978 1 0.924 0.924 - - - - - predicted gene, 26851 [Source:MGI Symbol;Acc:MGI:5477345]
94. Gm13928 ENSMUSG00000081069 1 0.924 0.924 - - - - - predicted gene 13928 [Source:MGI Symbol;Acc:MGI:3649213]
95. Fam166b ENSMUSG00000042788 4 0.924 0.924 - - - - - family with sequence similarity 166, member B [Source:MGI Symbol;Acc:MGI:2445194]
96. 7530422B04Rik 7530422B04Rik 4 0.924 0.924 - - - - -
97. Gm26266 Gm26266 1 0.924 0.924 - - - - -
98. Rell2 ENSMUSG00000044024 1 0.924 0.924 - - - - - RELT-like 2 [Source:MGI Symbol;Acc:MGI:1918044]
99. 2700016F22Rik ENSMUSG00000097731 59 0.924 0.924 - - - - - RIKEN cDNA 2700016F22 gene [Source:MGI Symbol;Acc:MGI:1919807]
100. Gm13225 Gm13225 9 0.924 0.924 - - - - -

There are 278 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA