Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Atg4a

Gene Name Gene ID Reads Annotation
Atg4a ENSMUSG00000079418, ENSMUSG00000116318 359 autophagy related 4A, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2147903]







Genes with expression patterns similar to Atg4a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Atg4a ENSMUSG00000079418, ENSMUSG00000116318 359 6 1.000 1.000 1.000 1.000 1.000 1.000 autophagy related 4A, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2147903]
2. Adarb2 ENSMUSG00000052551 671 0.967 - 0.967 - - - - adenosine deaminase, RNA-specific, B2 [Source:MGI Symbol;Acc:MGI:2151118]
3. Cdpf1 ENSMUSG00000064284 245 0.966 - 0.966 - - - - cysteine rich, DPF motif domain containing 1 [Source:MGI Symbol;Acc:MGI:1919605]
4. Dnajc27 ENSMUSG00000020657 686 0.966 - 0.966 - - - - DnaJ heat shock protein family (Hsp40) member C27 [Source:MGI Symbol;Acc:MGI:2443036]
5. Gm12166 ENSMUSG00000069899 88 0.962 - 0.962 - - - - predicted gene 12166 [Source:MGI Symbol;Acc:MGI:3650635]
6. Syt6 ENSMUSG00000027849 95 0.961 - 0.961 - - - - synaptotagmin VI [Source:MGI Symbol;Acc:MGI:1859544]
7. Cnr1 ENSMUSG00000044288 299 0.961 - 0.961 - - - - cannabinoid receptor 1 (brain) [Source:MGI Symbol;Acc:MGI:104615]
8. Myocd ENSMUSG00000020542 95 0.96 - 0.960 - - - - myocardin [Source:MGI Symbol;Acc:MGI:2137495]
9. Gm15823 ENSMUSG00000081143 242 0.96 - 0.960 - - - - predicted gene 15823 [Source:MGI Symbol;Acc:MGI:3801858]
10. Ppapdc3 Ppapdc3 168 0.96 - 0.960 - - - -
11. Gm26660 ENSMUSG00000097601 53 0.96 - 0.960 - - - - predicted gene, 26660 [Source:MGI Symbol;Acc:MGI:5477154]
12. Alas2 ENSMUSG00000025270 51 0.959 - 0.959 - - - - aminolevulinic acid synthase 2, erythroid [Source:MGI Symbol;Acc:MGI:87990]
13. Fam115c Fam115c 138 0.959 - 0.959 - - - -
14. Riiad1 ENSMUSG00000028139 70 0.959 - 0.959 - - - - regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 [Source:MGI Symbol;Acc:MGI:1913603]
15. Lgals4 ENSMUSG00000053964 72 0.959 - 0.959 - - - - lectin, galactose binding, soluble 4 [Source:MGI Symbol;Acc:MGI:107536]
16. Ccl9 ENSMUSG00000019122 84 0.958 - 0.958 - - - - chemokine (C-C motif) ligand 9 [Source:MGI Symbol;Acc:MGI:104533]
17. Gm5560 ENSMUSG00000067161 131 0.957 - 0.957 - - - - predicted pseudogene 5560 [Source:MGI Symbol;Acc:MGI:3647980]
18. Hspa2 ENSMUSG00000059970 134 0.957 - 0.957 - - - - heat shock protein 2 [Source:MGI Symbol;Acc:MGI:96243]
19. Tmem181a ENSMUSG00000038141 197 0.957 - 0.957 - - - - transmembrane protein 181A [Source:MGI Symbol;Acc:MGI:1924356]
20. Paxbp1 ENSMUSG00000022974 322 0.956 - 0.956 - - - - PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
21. Gm15542 ENSMUSG00000083396 259 0.956 - 0.956 - - - - predicted gene 15542 [Source:MGI Symbol;Acc:MGI:3782990]
22. Mir1983 ENSMUSG00000088148 63 0.955 - 0.955 - - - - microRNA 1983 [Source:MGI Symbol;Acc:MGI:3837223]
23. Slc7a14 ENSMUSG00000069072 717 0.953 - 0.953 - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 [Source:MGI Symbol;Acc:MGI:3040688]
24. 4833418N02Rik ENSMUSG00000085287 88 0.953 - 0.953 - - - - RIKEN cDNA 4833418N02 gene [Source:MGI Symbol;Acc:MGI:1921847]
25. 4921530L18Rik 4921530L18Rik 134 0.952 - 0.952 - - - -
26. Dennd6b ENSMUSG00000015377 391 0.951 - 0.951 - - - - DENN/MADD domain containing 6B [Source:MGI Symbol;Acc:MGI:1916690]
27. Dnajc1 ENSMUSG00000026740 1120 0.95 - 0.950 - - - - DnaJ heat shock protein family (Hsp40) member C1 [Source:MGI Symbol;Acc:MGI:103268]
28. 4930579G24Rik ENSMUSG00000027811 253 0.949 - 0.949 - - - - RIKEN cDNA 4930579G24 gene [Source:MGI Symbol;Acc:MGI:1923189]
29. Prdm16 ENSMUSG00000039410 833 0.949 - 0.949 - - - - PR domain containing 16 [Source:MGI Symbol;Acc:MGI:1917923]
30. S100a13 ENSMUSG00000042312 218 0.947 - 0.947 - - - - S100 calcium binding protein A13 [Source:MGI Symbol;Acc:MGI:109581]
31. Hecw2 ENSMUSG00000042807 346 0.947 - 0.947 - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2685817]
32. Airn ENSMUSG00000078247 868 0.947 - 0.947 - - - - antisense Igf2r RNA [Source:MGI Symbol;Acc:MGI:1353471]
33. Cobl ENSMUSG00000020173 269 0.947 - 0.947 - - - - cordon-bleu WH2 repeat [Source:MGI Symbol;Acc:MGI:105056]
34. Scfd2 ENSMUSG00000062110 241 0.946 - 0.946 - - - - Sec1 family domain containing 2 [Source:MGI Symbol;Acc:MGI:2443446]
35. Cd99l2 ENSMUSG00000035776 1089 0.946 - 0.946 - - - - CD99 antigen-like 2 [Source:MGI Symbol;Acc:MGI:2177151]
36. Lrch1 ENSMUSG00000068015 520 0.943 - 0.943 - - - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:MGI Symbol;Acc:MGI:2443390]
37. Hif3a ENSMUSG00000004328 436 0.943 - 0.943 - - - - hypoxia inducible factor 3, alpha subunit [Source:MGI Symbol;Acc:MGI:1859778]
38. Gm21781 ENSMUSG00000095123 261 0.942 - 0.942 - - - - predicted gene, 21781 [Source:MGI Symbol;Acc:MGI:5433945]
39. Gm10722 ENSMUSG00000091028 539 0.94 - 0.940 - - - - predicted gene 10722 [Source:MGI Symbol;Acc:MGI:3642024]
40. Mertk ENSMUSG00000014361 329 0.939 - 0.939 - - - - c-mer proto-oncogene tyrosine kinase [Source:MGI Symbol;Acc:MGI:96965]
41. C920011F04Rik C920011F04Rik 362 0.939 - 0.939 - - - -
42. Wscd1 ENSMUSG00000020811 318 0.939 - 0.939 - - - - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
43. Lmnb1 ENSMUSG00000024590 2867 0.939 - 0.939 - - - - lamin B1 [Source:MGI Symbol;Acc:MGI:96795]
44. Stom ENSMUSG00000026880 646 0.938 - 0.938 - - - - stomatin [Source:MGI Symbol;Acc:MGI:95403]
45. Grin3a ENSMUSG00000039579 433 0.938 - 0.938 - - - - glutamate receptor ionotropic, NMDA3A [Source:MGI Symbol;Acc:MGI:1933206]
46. Prkar1b ENSMUSG00000025855 360 0.938 - 0.938 - - - - protein kinase, cAMP dependent regulatory, type I beta [Source:MGI Symbol;Acc:MGI:97759]
47. Pex10 ENSMUSG00000029047 243 0.938 - 0.938 - - - - peroxisomal biogenesis factor 10 [Source:MGI Symbol;Acc:MGI:2684988]
48. Defb42 ENSMUSG00000054763 274 0.937 - 0.937 - - - - defensin beta 42 [Source:MGI Symbol;Acc:MGI:3033850]
49. Ptplad2 Ptplad2 382 0.937 - 0.937 - - - -
50. Ccne2 ENSMUSG00000028212 419 0.937 - 0.937 - - - - cyclin E2 [Source:MGI Symbol;Acc:MGI:1329034]
51. Zfp788 ENSMUSG00000074165 612 0.937 - 0.937 - - - - zinc finger protein 788 [Source:MGI Symbol;Acc:MGI:1914857]
52. Tecpr1 ENSMUSG00000066621 1296 0.936 - 0.936 - - - - tectonin beta-propeller repeat containing 1 [Source:MGI Symbol;Acc:MGI:1917631]
53. 2410016O06Rik 799 0.936 - 0.936 - - - - RIKEN cDNA 2410016O06 gene
54. Synpo2 ENSMUSG00000050315 250 0.935 - 0.935 - - - - synaptopodin 2 [Source:MGI Symbol;Acc:MGI:2153070]
55. Rpl22-ps1 ENSMUSG00000080877 368 0.935 - 0.935 - - - - ribosomal protein L22, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644276]
56. Fanci ENSMUSG00000039187 478 0.934 - 0.934 - - - - Fanconi anemia, complementation group I [Source:MGI Symbol;Acc:MGI:2384790]
57. Robo2 ENSMUSG00000052516 1177 0.934 - 0.934 - - - - roundabout guidance receptor 2 [Source:MGI Symbol;Acc:MGI:1890110]
58. Rhbdd3 ENSMUSG00000034175 497 0.933 - 0.933 - - - - rhomboid domain containing 3 [Source:MGI Symbol;Acc:MGI:2444684]
59. Afap1l1 ENSMUSG00000033032 472 0.933 - 0.933 - - - - actin filament associated protein 1-like 1 [Source:MGI Symbol;Acc:MGI:2147199]
60. 8430419L09Rik 8430419L09Rik 409 0.933 - 0.933 - - - -
61. Nr6a1 ENSMUSG00000063972 485 0.932 - 0.932 - - - - nuclear receptor subfamily 6, group A, member 1 [Source:MGI Symbol;Acc:MGI:1352459]
62. Arl16 ENSMUSG00000057594 663 0.932 - 0.932 - - - - ADP-ribosylation factor-like 16 [Source:MGI Symbol;Acc:MGI:1917567]
63. Zfp599 ENSMUSG00000062794 354 0.931 - 0.931 - - - - zinc finger protein 599 [Source:MGI Symbol;Acc:MGI:2679006]
64. Trak1 ENSMUSG00000032536 705 0.93 - 0.930 - - - - trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
65. Zbtb8a ENSMUSG00000028807 233 0.929 - 0.929 - - - - zinc finger and BTB domain containing 8a [Source:MGI Symbol;Acc:MGI:1920930]
66. Espl1 ENSMUSG00000058290 1337 0.929 - 0.929 - - - - extra spindle pole bodies 1, separase [Source:MGI Symbol;Acc:MGI:2146156]
67. Prkag2 ENSMUSG00000028944 521 0.929 - 0.929 - - - - protein kinase, AMP-activated, gamma 2 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:1336153]
68. Ccdc120 ENSMUSG00000031150 486 0.925 - 0.925 - - - - coiled-coil domain containing 120 [Source:MGI Symbol;Acc:MGI:1859619]
69. Ncs1 ENSMUSG00000062661 1121 0.924 - 0.924 - - - - neuronal calcium sensor 1 [Source:MGI Symbol;Acc:MGI:109166]
70. Tmem205 ENSMUSG00000040883 373 0.921 - 0.921 - - - - transmembrane protein 205 [Source:MGI Symbol;Acc:MGI:3045495]
71. Nt5c3 ENSMUSG00000029780 2379 0.919 - 0.919 - - - - 5'-nucleotidase, cytosolic III [Source:MGI Symbol;Acc:MGI:1927186]
72. Exoc8 ENSMUSG00000074030 1106 0.918 - 0.918 - - - - exocyst complex component 8 [Source:MGI Symbol;Acc:MGI:2142527]
73. Senp2 ENSMUSG00000022855 4436 0.917 - 0.917 - - - - SUMO/sentrin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1923076]
74. Rsbn1 ENSMUSG00000044098 1083 0.917 - 0.917 - - - - rosbin, round spermatid basic protein 1 [Source:MGI Symbol;Acc:MGI:2444993]
75. Fam69b ENSMUSG00000036186 667 0.916 - 0.916 - - - - family with sequence similarity 69, member B [Source:MGI Symbol;Acc:MGI:1927576]
76. Rabgap1l ENSMUSG00000026721 548 0.916 - 0.916 - - - - RAB GTPase activating protein 1-like [Source:MGI Symbol;Acc:MGI:1352507]
77. Prkcd ENSMUSG00000021948 898 0.916 - 0.916 - - - - protein kinase C, delta [Source:MGI Symbol;Acc:MGI:97598]
78. Mir3091 ENSMUSG00000092827 755 0.916 - 0.916 - - - - microRNA 3091 [Source:MGI Symbol;Acc:MGI:4834305]
79. Brf2 ENSMUSG00000031487 512 0.914 - 0.914 - - - - BRF2, RNA polymerase III transcription initiation factor 50kDa subunit [Source:MGI Symbol;Acc:MGI:1913903]
80. Rpp25l ENSMUSG00000036114 1760 0.914 - 0.914 - - - - ribonuclease P/MRP 25 subunit-like [Source:MGI Symbol;Acc:MGI:1917211]
81. 6820431F20Rik ENSMUSG00000071796 1045 0.913 - 0.913 - - - - RIKEN cDNA 6820431F20 gene [Source:MGI Symbol;Acc:MGI:3694236]
82. Tstd3 ENSMUSG00000028251 1160 0.912 - 0.912 - - - - thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 [Source:MGI Symbol;Acc:MGI:1924282]
83. Diap1 Diap1 625 0.912 - 0.912 - - - -
84. Zfp385a ENSMUSG00000000552 2121 0.912 - 0.912 - - - - zinc finger protein 385A [Source:MGI Symbol;Acc:MGI:1352495]
85. Mpp6 ENSMUSG00000038388 1064 0.911 - 0.911 - - - - membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) [Source:MGI Symbol;Acc:MGI:1927340]
86. Zfyve16 ENSMUSG00000021706 747 0.91 - 0.910 - - - - zinc finger, FYVE domain containing 16 [Source:MGI Symbol;Acc:MGI:2145181]
87. Osbpl3 ENSMUSG00000029822 569 0.91 - 0.910 - - - - oxysterol binding protein-like 3 [Source:MGI Symbol;Acc:MGI:1918970]
88. Iah1 ENSMUSG00000062054 750 0.91 - 0.910 - - - - isoamyl acetate-hydrolyzing esterase 1 homolog [Source:MGI Symbol;Acc:MGI:1914982]
89. Dennd1b ENSMUSG00000056268 707 0.909 - 0.909 - - - - DENN/MADD domain containing 1B [Source:MGI Symbol;Acc:MGI:2447812]
90. Ankle1 ENSMUSG00000046295 532 0.908 - 0.908 - - - - ankyrin repeat and LEM domain containing 1 [Source:MGI Symbol;Acc:MGI:1918775]
91. Stx17 ENSMUSG00000061455 814 0.908 - 0.908 - - - - syntaxin 17 [Source:MGI Symbol;Acc:MGI:1914977]
92. Rbbp9 ENSMUSG00000027428 1700 0.908 - 0.908 - - - - retinoblastoma binding protein 9, serine hydrolase [Source:MGI Symbol;Acc:MGI:1347074]
93. Tmem132e ENSMUSG00000020701 366 0.907 - 0.907 - - - - transmembrane protein 132E [Source:MGI Symbol;Acc:MGI:2685490]
94. Flywch2 ENSMUSG00000023911 364 0.906 - 0.906 - - - - FLYWCH family member 2 [Source:MGI Symbol;Acc:MGI:1924167]
95. Prdm4 ENSMUSG00000035529 1371 0.906 - 0.906 - - - - PR domain containing 4 [Source:MGI Symbol;Acc:MGI:1920093]
96. Fra10ac1 ENSMUSG00000054237 851 0.906 - 0.906 - - - - FRA10AC1 homolog (human) [Source:MGI Symbol;Acc:MGI:1917817]
97. BC018242 BC018242 311 0.904 - 0.904 - - - -
98. Mrpl41 ENSMUSG00000036850 2477 0.903 - 0.903 - - - - mitochondrial ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1333816]
99. Numa1 ENSMUSG00000066306 1150 0.902 - 0.902 - - - - nuclear mitotic apparatus protein 1 [Source:MGI Symbol;Acc:MGI:2443665]
100. Tmem168 ENSMUSG00000029569 841 0.902 - 0.902 - - - - transmembrane protein 168 [Source:MGI Symbol;Acc:MGI:1921794]

There are 188 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA