Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Apobec3

Gene Name Gene ID Reads Annotation
Apobec3 ENSMUSG00000009585 138 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 [Source:MGI Symbol;Acc:MGI:1933111]







Genes with expression patterns similar to Apobec3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Apobec3 ENSMUSG00000009585 138 6 1.000 1.000 1.000 1.000 1.000 1.000 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 [Source:MGI Symbol;Acc:MGI:1933111]
2. Rasgrf2 ENSMUSG00000021708 16 1.684 - - 0.943 - 0.741 - RAS protein-specific guanine nucleotide-releasing factor 2 [Source:MGI Symbol;Acc:MGI:109137]
3. Creb3l3 ENSMUSG00000035041 46 1.616 - - - 0.825 0.791 - cAMP responsive element binding protein 3-like 3 [Source:MGI Symbol;Acc:MGI:2384786]
4. Tmem56 ENSMUSG00000028132 111 1.532 - - - 0.810 0.722 - transmembrane protein 56 [Source:MGI Symbol;Acc:MGI:1923195]
5. Gm13166 ENSMUSG00000085525, ENSMUSG00000116487 110 1.505 - - 0.710 0.795 - - predicted gene 13166 [Source:MGI Symbol;Acc:MGI:3705130]
6. Itgb2 ENSMUSG00000000290 154 1.472 - 0.731 - 0.741 - - integrin beta 2 [Source:MGI Symbol;Acc:MGI:96611]
7. Gm25933 ENSMUSG00000095876 6 0.965 - - 0.965 - - - predicted gene, 25933 [Source:MGI Symbol;Acc:MGI:5455710]
8. Abcg3 ENSMUSG00000029299 9 0.965 - - 0.965 - - - ATP binding cassette subfamily G member 3 [Source:MGI Symbol;Acc:MGI:1351624]
9. Gjb6 ENSMUSG00000040055 80 0.965 - - 0.965 - - - gap junction protein, beta 6 [Source:MGI Symbol;Acc:MGI:107588]
10. Gm22806 ENSMUSG00000064672 11 0.965 - - 0.965 - - - predicted gene, 22806 [Source:MGI Symbol;Acc:MGI:5452583]
11. Gm10715 ENSMUSG00000096201 18 0.965 - - 0.965 - - - predicted gene 10715 [Source:MGI Symbol;Acc:MGI:3642376]
12. Gm26704 ENSMUSG00000097875, ENSMUSG00000116724 9 0.964 - - 0.964 - - - predicted gene, 26704 [Source:MGI Symbol;Acc:MGI:5477198]
13. 5330439K02Rik ENSMUSG00000097827 13 0.963 - - 0.963 - - - RIKEN cDNA 5330439K02 gene [Source:MGI Symbol;Acc:MGI:1925532]
14. Gm25348 ENSMUSG00000089586 11 0.963 - - 0.963 - - - predicted gene, 25348 [Source:MGI Symbol;Acc:MGI:5455125]
15. Gm13961 ENSMUSG00000084094 26 0.959 - - 0.959 - - - predicted gene 13961 [Source:MGI Symbol;Acc:MGI:3650627]
16. Ccdc11 Ccdc11 17 0.958 - - 0.958 - - -
17. Gm11630 ENSMUSG00000086917 9 0.958 - - 0.958 - - - predicted gene 11630 [Source:MGI Symbol;Acc:MGI:3650475]
18. Gm5921 ENSMUSG00000074034 52 0.956 - - 0.956 - - - predicted gene 5921 [Source:MGI Symbol;Acc:MGI:3648968]
19. Tlr7 ENSMUSG00000044583 11 0.956 - - 0.956 - - - toll-like receptor 7 [Source:MGI Symbol;Acc:MGI:2176882]
20. Arfgap2 ENSMUSG00000027255 8 0.954 - - 0.954 - - - ADP-ribosylation factor GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:1924288]
21. Gm25291 ENSMUSG00000084744 16 0.952 - - 0.952 - - - predicted gene, 25291 [Source:MGI Symbol;Acc:MGI:5455068]
22. Mir1983 ENSMUSG00000088148 63 0.952 - - 0.952 - - - microRNA 1983 [Source:MGI Symbol;Acc:MGI:3837223]
23. Crym ENSMUSG00000030905 71 0.949 - - 0.949 - - - crystallin, mu [Source:MGI Symbol;Acc:MGI:102675]
24. Vwa5a ENSMUSG00000023186 304 0.948 - - 0.948 - - - von Willebrand factor A domain containing 5A [Source:MGI Symbol;Acc:MGI:1915026]
25. Gm16283 ENSMUSG00000087020 28 0.947 - - 0.947 - - - predicted gene 16283 [Source:MGI Symbol;Acc:MGI:3826591]
26. Zfp58 ENSMUSG00000071291 34 0.946 - - 0.946 - - - zinc finger protein 58 [Source:MGI Symbol;Acc:MGI:99205]
27. Hoxa6 ENSMUSG00000043219 83 0.946 - - 0.946 - - - homeobox A6 [Source:MGI Symbol;Acc:MGI:96178]
28. Glt1d1 ENSMUSG00000049971 48 0.945 - - 0.945 - - - glycosyltransferase 1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2442755]
29. Vps13c ENSMUSG00000035284 230 0.944 - - 0.944 - - - vacuolar protein sorting 13C [Source:MGI Symbol;Acc:MGI:2444207]
30. Tbx1 ENSMUSG00000009097 77 0.944 - - 0.944 - - - T-box 1 [Source:MGI Symbol;Acc:MGI:98493]
31. Znf41-ps ENSMUSG00000084350 36 0.943 - - 0.943 - - - ZNF41, pseudogene [Source:MGI Symbol;Acc:MGI:1917255]
32. Mal ENSMUSG00000027375 39 0.942 - - 0.942 - - - myelin and lymphocyte protein, T cell differentiation protein [Source:MGI Symbol;Acc:MGI:892970]
33. Aim1l 28 0.941 - - 0.941 - - - absent in melanoma 1-like, transcript variant X4
34. Taco1 ENSMUSG00000001983 63 0.941 - - 0.941 - - - translational activator of mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:1917457]
35. Kcnd2 ENSMUSG00000060882 118 0.941 - - 0.941 - - - potassium voltage-gated channel, Shal-related family, member 2 [Source:MGI Symbol;Acc:MGI:102663]
36. Pde1a ENSMUSG00000059173 184 0.94 - - 0.940 - - - phosphodiesterase 1A, calmodulin-dependent [Source:MGI Symbol;Acc:MGI:1201792]
37. Evi2a ENSMUSG00000078771 27 0.938 - - 0.938 - - - ecotropic viral integration site 2a [Source:MGI Symbol;Acc:MGI:95458]
38. B130006D01Rik ENSMUSG00000075596 183 0.937 - - 0.937 - - - RIKEN cDNA B130006D01 gene [Source:MGI Symbol;Acc:MGI:2444371]
39. Snx11 ENSMUSG00000020876 41 0.933 - - 0.933 - - - sorting nexin 11 [Source:MGI Symbol;Acc:MGI:1921729]
40. Gm3150 ENSMUSG00000096173 83 0.933 - - 0.933 - - - predicted gene 3150 [Source:MGI Symbol;Acc:MGI:3781329]
41. Plcl1 ENSMUSG00000038349 34 0.933 - - 0.933 - - - phospholipase C-like 1 [Source:MGI Symbol;Acc:MGI:3036262]
42. Ptpre ENSMUSG00000041836 208 0.932 - - - - - 0.932 protein tyrosine phosphatase, receptor type, E [Source:MGI Symbol;Acc:MGI:97813]
43. Gm20696 ENSMUSG00000030068 92 0.932 - - 0.932 - - - predicted gene 20696 [Source:MGI Symbol;Acc:MGI:5313143]
44. Gm26734 ENSMUSG00000097460 45 0.929 - - 0.929 - - - predicted gene, 26734 [Source:MGI Symbol;Acc:MGI:5477228]
45. Pex12 ENSMUSG00000018733 304 0.927 - - 0.927 - - - peroxisomal biogenesis factor 12 [Source:MGI Symbol;Acc:MGI:2144177]
46. 2700081L22Rik 2700081L22Rik 44 0.927 - - 0.927 - - -
47. Lhfpl1 ENSMUSG00000041700 92 0.926 - - 0.926 - - - lipoma HMGIC fusion partner-like 1 [Source:MGI Symbol;Acc:MGI:1891214]
48. Ampd3 ENSMUSG00000005686 113 0.926 - - 0.926 - - - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
49. Prr16 ENSMUSG00000073565 31 0.922 - - 0.922 - - - proline rich 16 [Source:MGI Symbol;Acc:MGI:1918623]
50. Gm14138 ENSMUSG00000081572 36 0.921 - - 0.921 - - - predicted gene 14138 [Source:MGI Symbol;Acc:MGI:3649496]
51. Adrm1 ENSMUSG00000039041 219 0.92 - - 0.920 - - - adhesion regulating molecule 1 [Source:MGI Symbol;Acc:MGI:1929289]
52. Clcnka ENSMUSG00000033770 16 0.919 - - 0.919 - - - chloride channel, voltage-sensitive Ka [Source:MGI Symbol;Acc:MGI:1329026]
53. Zfp54 ENSMUSG00000023882 41 0.917 - - 0.917 - - - zinc finger protein 54 [Source:MGI Symbol;Acc:MGI:99201]
54. Gm4462 ENSMUSG00000090319 36 0.915 - - 0.915 - - - predicted gene 4462 [Source:MGI Symbol;Acc:MGI:3782646]
55. 4930426D05Rik ENSMUSG00000043168 40 0.915 - - 0.915 - - - RIKEN cDNA 4930426D05 gene [Source:MGI Symbol;Acc:MGI:1921894]
56. Zfp551 ENSMUSG00000034071 101 0.909 - - 0.909 - - - zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]
57. Pcdh10 ENSMUSG00000049100 172 0.907 - - 0.907 - - - protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]
58. Fau ENSMUSG00000038274 25 0.906 - - 0.906 - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [Source:MGI Symbol;Acc:MGI:102547]
59. 1700007K13Rik ENSMUSG00000026831 52 0.906 - - 0.906 - - - RIKEN cDNA 1700007K13 gene [Source:MGI Symbol;Acc:MGI:1916577]
60. Aatk ENSMUSG00000025375 43 0.903 - - 0.903 - - - apoptosis-associated tyrosine kinase [Source:MGI Symbol;Acc:MGI:1197518]
61. Ccnb2-ps ENSMUSG00000083718 83 0.903 - - 0.903 - - - cyclin B2, pseudogene [Source:MGI Symbol;Acc:MGI:3779896]
62. Ptar1 ENSMUSG00000074925 115 0.901 - - 0.901 - - - protein prenyltransferase alpha subunit repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921875]
63. Fam35a 250 0.901 - - 0.901 - - - family with sequence similarity 35, member A, transcript variant X8
64. 2810433D01Rik ENSMUSG00000086283 23 0.898 - - 0.898 - - - RIKEN cDNA 2810433D01 gene [Source:MGI Symbol;Acc:MGI:1924382]
65. Tle6 ENSMUSG00000034758 116 0.896 - - 0.896 - - - transducin-like enhancer of split 6 [Source:MGI Symbol;Acc:MGI:2149593]
66. Gpr124 Gpr124 470 0.895 - - - - - 0.895
67. Gm13139 312 0.893 - - 0.893 - - - predicted gene 13139
68. Gm6211 ENSMUSG00000091577 43 0.893 - - 0.893 - - - predicted gene 6211 [Source:MGI Symbol;Acc:MGI:3646534]
69. Rapgef5 ENSMUSG00000041992 56 0.893 - - 0.893 - - - Rap guanine nucleotide exchange factor (GEF) 5 [Source:MGI Symbol;Acc:MGI:2444365]
70. Fstl4 ENSMUSG00000036264 74 0.892 - - 0.892 - - - follistatin-like 4 [Source:MGI Symbol;Acc:MGI:2443199]
71. Tapbpl ENSMUSG00000038213 246 0.891 - - 0.891 - - - TAP binding protein-like [Source:MGI Symbol;Acc:MGI:2384853]
72. Cfi ENSMUSG00000058952 17 0.891 - - - 0.891 - - complement component factor i [Source:MGI Symbol;Acc:MGI:105937]
73. Rnf135 ENSMUSG00000020707 98 0.89 - - 0.890 - - - ring finger protein 135 [Source:MGI Symbol;Acc:MGI:1919206]
74. Sla2 ENSMUSG00000027636 24 0.889 - - - 0.889 - - Src-like-adaptor 2 [Source:MGI Symbol;Acc:MGI:1925049]
75. Selplg ENSMUSG00000048163 40 0.887 - - - 0.887 - - selectin, platelet (p-selectin) ligand [Source:MGI Symbol;Acc:MGI:106689]
76. Casp3 ENSMUSG00000031628 475 0.885 - - 0.885 - - - caspase 3 [Source:MGI Symbol;Acc:MGI:107739]
77. A730017L22Rik ENSMUSG00000085566 146 0.883 - - 0.883 - - - RIKEN cDNA A730017L22 gene [Source:MGI Symbol;Acc:MGI:3584452]
78. Nipal1 ENSMUSG00000067219 50 0.882 - - 0.882 - - - NIPA-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1917951]
79. Rad23a ENSMUSG00000003813 128 0.881 - - 0.881 - - - RAD23 homolog A, nucleotide excision repair protein [Source:MGI Symbol;Acc:MGI:105126]
80. 2310002L09Rik ENSMUSG00000028396 135 0.879 - - 0.879 - - - RIKEN cDNA 2310002L09 gene [Source:MGI Symbol;Acc:MGI:1916780]
81. Apoc1 ENSMUSG00000040564 43 0.879 - - - 0.879 - - apolipoprotein C-I [Source:MGI Symbol;Acc:MGI:88053]
82. Fgf8 ENSMUSG00000025219 27 0.877 - - 0.877 - - - fibroblast growth factor 8 [Source:MGI Symbol;Acc:MGI:99604]
83. Gm24362 ENSMUSG00000097995 279 0.877 - - - - - 0.877 predicted gene, 24362 [Source:MGI Symbol;Acc:MGI:5454139]
84. Oprm1 ENSMUSG00000000766 292 0.868 - - 0.868 - - - opioid receptor, mu 1 [Source:MGI Symbol;Acc:MGI:97441]
85. Ctf2 ENSMUSG00000060034 240 0.867 - - 0.867 - - - cardiotrophin 2 [Source:MGI Symbol;Acc:MGI:2684607]
86. Ccbl2 Ccbl2 554 0.867 - - - - - 0.867
87. Gm5258 ENSMUSG00000091806 123 0.867 - - 0.867 - - - predicted gene 5258 [Source:MGI Symbol;Acc:MGI:3647794]
88. Gm20716 ENSMUSG00000093752 3044 0.866 - - 0.866 - - - predicted gene 20716 [Source:MGI Symbol;Acc:MGI:5313163]
89. Faxc ENSMUSG00000028246 115 0.864 - - 0.864 - - - failed axon connections homolog [Source:MGI Symbol;Acc:MGI:1923382]
90. Cystm1 ENSMUSG00000046727 199 0.864 - - 0.864 - - - cysteine-rich transmembrane module containing 1 [Source:MGI Symbol;Acc:MGI:1913310]
91. Gm826 ENSMUSG00000074623 27 0.861 - - - 0.861 - - predicted gene 826 [Source:MGI Symbol;Acc:MGI:2685672]
92. Gm5121 ENSMUSG00000066626 235 0.861 - - 0.861 - - - predicted gene 5121 [Source:MGI Symbol;Acc:MGI:3647258]
93. C8b ENSMUSG00000029656 12 0.861 - - - 0.861 - - complement component 8, beta polypeptide [Source:MGI Symbol;Acc:MGI:88236]
94. Dnase2a ENSMUSG00000003812 117 0.86 - - 0.860 - - - deoxyribonuclease II alpha [Source:MGI Symbol;Acc:MGI:1329019]
95. Stxbp3a Stxbp3a 493 0.856 - - 0.856 - - -
96. Tnfaip2 ENSMUSG00000021281 214 0.854 - - - 0.854 - - tumor necrosis factor, alpha-induced protein 2 [Source:MGI Symbol;Acc:MGI:104960]
97. Gm12942 332 0.853 - - 0.853 - - - predicted gene 12942
98. Hid1 ENSMUSG00000034586 131 0.851 - - 0.851 - - - HID1 domain containing [Source:MGI Symbol;Acc:MGI:2445087]
99. Gna15 ENSMUSG00000034792 26 0.85 - - - 0.850 - - guanine nucleotide binding protein, alpha 15 [Source:MGI Symbol;Acc:MGI:95770]
100. Naip6 ENSMUSG00000078942 18 0.849 - - - - 0.849 - NLR family, apoptosis inhibitory protein 6 [Source:MGI Symbol;Acc:MGI:1298222]

There are 364 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA