Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Apba3

Gene Name Gene ID Reads Annotation
Apba3 ENSMUSG00000004931 503 amyloid beta (A4) precursor protein-binding, family A, member 3 [Source:MGI Symbol;Acc:MGI:1888527]







Genes with expression patterns similar to Apba3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Apba3 ENSMUSG00000004931 503 6 1.000 1.000 1.000 1.000 1.000 1.000 amyloid beta (A4) precursor protein-binding, family A, member 3 [Source:MGI Symbol;Acc:MGI:1888527]
2. Ccdc89 ENSMUSG00000044362 82 1.577 - - 0.740 - - 0.837 coiled-coil domain containing 89 [Source:MGI Symbol;Acc:MGI:1917304]
3. Arhgap6 ENSMUSG00000031355 260 0.874 - - - - - 0.874 Rho GTPase activating protein 6 [Source:MGI Symbol;Acc:MGI:1196332]
4. Intu ENSMUSG00000060798, ENSMUSG00000116357 224 0.872 - - - - - 0.872 inturned planar cell polarity protein [Source:MGI Symbol;Acc:MGI:2443752]
5. Stk19 ENSMUSG00000061207 621 0.872 - - - - - 0.872 serine/threonine kinase 19 [Source:MGI Symbol;Acc:MGI:1860085]
6. Gen1 ENSMUSG00000051235 163 0.87 - - 0.870 - - - GEN1, Holliday junction 5' flap endonuclease [Source:MGI Symbol;Acc:MGI:2443149]
7. 1700042O10Rik ENSMUSG00000086391 36 0.869 - - - - - 0.869 RIKEN cDNA 1700042O10 gene [Source:MGI Symbol;Acc:MGI:1920571]
8. Kri1 ENSMUSG00000035047 116 0.869 - - - - - 0.869 KRI1 homolog [Source:MGI Symbol;Acc:MGI:2384899]
9. Prss53 ENSMUSG00000044139 49 0.868 - - - - - 0.868 protease, serine 53 [Source:MGI Symbol;Acc:MGI:2652890]
10. A330048O09Rik ENSMUSG00000097326 31 0.866 - - - - - 0.866 RIKEN cDNA A330048O09 gene [Source:MGI Symbol;Acc:MGI:2443792]
11. Angpt2 ENSMUSG00000031465 118 0.866 - - - - - 0.866 angiopoietin 2 [Source:MGI Symbol;Acc:MGI:1202890]
12. Gm22620 ENSMUSG00000064634 44 0.866 - - - - - 0.866 predicted gene, 22620 [Source:MGI Symbol;Acc:MGI:5452397]
13. Slfn2 ENSMUSG00000072620, ENSMUSG00000115954, ENSMUSG00000115991, ENSMUSG00000116022 38 0.865 - - - - - 0.865 schlafen 2 [Source:NCBI gene;Acc:20556]
14. Zfp619 ENSMUSG00000068959 230 0.862 - - - - - 0.862 zinc finger protein 619 [Source:MGI Symbol;Acc:MGI:1917477]
15. 1700029F12Rik ENSMUSG00000052075 13 0.862 - - - - - 0.862 RIKEN cDNA 1700029F12 gene [Source:MGI Symbol;Acc:MGI:1913729]
16. Lgals9 ENSMUSG00000001123 214 0.862 - - - - - 0.862 lectin, galactose binding, soluble 9 [Source:MGI Symbol;Acc:MGI:109496]
17. Klk13 ENSMUSG00000054046 16 0.862 - - - - - 0.862 kallikrein related-peptidase 13 [Source:MGI Symbol;Acc:MGI:3615275]
18. Slc23a1 ENSMUSG00000024354 693 0.861 - - - - - 0.861 solute carrier family 23 (nucleobase transporters), member 1 [Source:MGI Symbol;Acc:MGI:1341903]
19. Ak5 ENSMUSG00000039058 89 0.861 - - - - - 0.861 adenylate kinase 5 [Source:MGI Symbol;Acc:MGI:2677491]
20. Zfp493 ENSMUSG00000090659 91 0.857 - - - - - 0.857 zinc finger protein 493 [Source:MGI Symbol;Acc:MGI:1920208]
21. Gm5116 ENSMUSG00000100751 16 0.855 - - - - - 0.855 predicted gene 5116 [Source:MGI Symbol;Acc:MGI:3649164]
22. Rpl27-ps3 ENSMUSG00000073640 99 0.855 - - - - - 0.855 ribosomal protein L27, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3646174]
23. Elovl4 ENSMUSG00000032262 290 0.855 - - - - - 0.855 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 [Source:MGI Symbol;Acc:MGI:1933331]
24. Filip1l ENSMUSG00000043336 937 0.855 - - - - - 0.855 filamin A interacting protein 1-like [Source:MGI Symbol;Acc:MGI:1925999]
25. Ntng1 ENSMUSG00000059857 124 0.854 - - - - - 0.854 netrin G1 [Source:MGI Symbol;Acc:MGI:1934028]
26. Ifitm10 ENSMUSG00000045777 59 0.854 - - - - - 0.854 interferon induced transmembrane protein 10 [Source:MGI Symbol;Acc:MGI:2444776]
27. Nfatc1 ENSMUSG00000033016 281 0.853 - - - - - 0.853 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 [Source:MGI Symbol;Acc:MGI:102469]
28. Prtn3 ENSMUSG00000057729 200 0.852 - - - - - 0.852 proteinase 3 [Source:MGI Symbol;Acc:MGI:893580]
29. Gm20760 ENSMUSG00000093919 68 0.851 - - - - - 0.851 predicted gene, 20760 [Source:MGI Symbol;Acc:MGI:5434116]
30. Trp53i13 ENSMUSG00000044328 168 0.85 - - - - - 0.850 transformation related protein 53 inducible protein 13 [Source:MGI Symbol;Acc:MGI:1915125]
31. Sox18 ENSMUSG00000046470 111 0.849 - - - - - 0.849 SRY (sex determining region Y)-box 18 [Source:MGI Symbol;Acc:MGI:103559]
32. Gm15396 ENSMUSG00000109491 112 0.847 - - - - - 0.847 predicted gene 15396 [Source:MGI Symbol;Acc:MGI:3705202]
33. Gm16292 Gm16292 40 0.846 - - - - - 0.846
34. Gm11964 ENSMUSG00000081021 513 0.844 - - - - - 0.844 predicted gene 11964 [Source:MGI Symbol;Acc:MGI:3652241]
35. Lnx2 ENSMUSG00000016520 439 0.844 - - - - - 0.844 ligand of numb-protein X 2 [Source:MGI Symbol;Acc:MGI:2155959]
36. Nsun3 ENSMUSG00000050312 572 0.841 - - - - - 0.841 NOL1/NOP2/Sun domain family member 3 [Source:MGI Symbol;Acc:MGI:2146565]
37. Eif4e3 ENSMUSG00000093661 321 0.841 - - - - - 0.841 eukaryotic translation initiation factor 4E member 3 [Source:MGI Symbol;Acc:MGI:1914142]
38. Pde4a ENSMUSG00000032177 226 0.839 - - - - - 0.839 phosphodiesterase 4A, cAMP specific [Source:MGI Symbol;Acc:MGI:99558]
39. Tmf1 ENSMUSG00000030059 432 0.839 - - - - - 0.839 TATA element modulatory factor 1 [Source:MGI Symbol;Acc:MGI:2684999]
40. Ipo7 ENSMUSG00000066232 167 0.837 - - - - - 0.837 importin 7 [Source:MGI Symbol;Acc:MGI:2152414]
41. Zc3hav1 ENSMUSG00000029826 107 0.834 - - - - - 0.834 zinc finger CCCH type, antiviral 1 [Source:MGI Symbol;Acc:MGI:1926031]
42. Pex1 ENSMUSG00000005907 371 0.834 - - - - - 0.834 peroxisomal biogenesis factor 1 [Source:MGI Symbol;Acc:MGI:1918632]
43. Pex26 ENSMUSG00000067825 293 0.833 - - - - - 0.833 peroxisomal biogenesis factor 26 [Source:MGI Symbol;Acc:MGI:1921293]
44. Kcns3 ENSMUSG00000043673 74 0.83 - - - - - 0.830 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 [Source:MGI Symbol;Acc:MGI:1098804]
45. BC002059 ENSMUSG00000060149 572 0.827 - - - - - 0.827 cDNA sequence BC002059 [Source:MGI Symbol;Acc:MGI:2384864]
46. Tek ENSMUSG00000006386 636 0.826 - - - - - 0.826 TEK receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:98664]
47. Gm6395 ENSMUSG00000091905 164 0.825 - - - - - 0.825 predicted gene 6395 [Source:MGI Symbol;Acc:MGI:3645295]
48. Cybb ENSMUSG00000015340 95 0.821 - - - - - 0.821 cytochrome b-245, beta polypeptide [Source:MGI Symbol;Acc:MGI:88574]
49. E4f1 ENSMUSG00000024137 221 0.819 - - - - - 0.819 E4F transcription factor 1 [Source:MGI Symbol;Acc:MGI:109530]
50. Per2 ENSMUSG00000055866 255 0.819 - - - - - 0.819 period circadian clock 2 [Source:MGI Symbol;Acc:MGI:1195265]
51. Pfkfb1 ENSMUSG00000025271 174 0.818 - - - - - 0.818 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:MGI Symbol;Acc:MGI:107816]
52. Dqx1 ENSMUSG00000009145 545 0.817 - - - - - 0.817 DEAQ RNA-dependent ATPase [Source:MGI Symbol;Acc:MGI:2136388]
53. Nudt6 ENSMUSG00000050174 128 0.816 - - - - - 0.816 nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:MGI Symbol;Acc:MGI:2387618]
54. Hist1h4f ENSMUSG00000069274 52 0.816 - - - - - 0.816 histone cluster 1, H4f [Source:MGI Symbol;Acc:MGI:2448425]
55. Gpt ENSMUSG00000022546 145 0.814 - - - - - 0.814 glutamic pyruvic transaminase, soluble [Source:MGI Symbol;Acc:MGI:95802]
56. Zcchc4 ENSMUSG00000029179 1006 0.814 - - - - - 0.814 zinc finger, CCHC domain containing 4 [Source:MGI Symbol;Acc:MGI:1926046]
57. Tada2a ENSMUSG00000018651 1094 0.811 - - - - - 0.811 transcriptional adaptor 2A [Source:MGI Symbol;Acc:MGI:2144471]
58. 3110021A11Rik 194 0.81 - - - - - 0.810 RIKEN cDNA 3110021A11 gene
59. Mkks ENSMUSG00000027274 1777 0.808 - - - - - 0.808 McKusick-Kaufman syndrome [Source:MGI Symbol;Acc:MGI:1891836]
60. Kif24 ENSMUSG00000028438 185 0.808 - - - - - 0.808 kinesin family member 24 [Source:MGI Symbol;Acc:MGI:1918345]
61. Sh2b2 ENSMUSG00000005057 875 0.807 - - - - - 0.807 SH2B adaptor protein 2 [Source:MGI Symbol;Acc:MGI:1345171]
62. 5033428I22Rik ENSMUSG00000097910 203 0.807 - - - - - 0.807 RIKEN cDNA 5033428I22 gene [Source:MGI Symbol;Acc:MGI:1923246]
63. Tcf7 ENSMUSG00000000782 407 0.805 - - - - - 0.805 transcription factor 7, T cell specific [Source:MGI Symbol;Acc:MGI:98507]
64. Entpd1 ENSMUSG00000048120 159 0.804 - - - - - 0.804 ectonucleoside triphosphate diphosphohydrolase 1 [Source:MGI Symbol;Acc:MGI:102805]
65. Nmrk1 ENSMUSG00000037847 809 0.804 - - - - - 0.804 nicotinamide riboside kinase 1 [Source:MGI Symbol;Acc:MGI:2147434]
66. Gm12166 ENSMUSG00000069899 88 0.801 - - - - - 0.801 predicted gene 12166 [Source:MGI Symbol;Acc:MGI:3650635]
67. Scfd2 ENSMUSG00000062110 241 0.799 - - - - - 0.799 Sec1 family domain containing 2 [Source:MGI Symbol;Acc:MGI:2443446]
68. Lyve1 ENSMUSG00000030787 184 0.798 - - - - - 0.798 lymphatic vessel endothelial hyaluronan receptor 1 [Source:MGI Symbol;Acc:MGI:2136348]
69. Sox7 ENSMUSG00000063060 538 0.796 - - - - - 0.796 SRY (sex determining region Y)-box 7 [Source:MGI Symbol;Acc:MGI:98369]
70. Eif2ak3 ENSMUSG00000031668 231 0.796 - - 0.796 - - - eukaryotic translation initiation factor 2 alpha kinase 3 [Source:MGI Symbol;Acc:MGI:1341830]
71. Fam207a ENSMUSG00000032977 261 0.794 - - - - - 0.794 family with sequence similarity 207, member A [Source:MGI Symbol;Acc:MGI:1916334]
72. Zfp574 ENSMUSG00000045252 1410 0.793 - - - - - 0.793 zinc finger protein 574 [Source:MGI Symbol;Acc:MGI:2442951]
73. Gm17530 ENSMUSG00000103731 93 0.79 - - - - - 0.790 predicted gene, 17530 [Source:MGI Symbol;Acc:MGI:4937164]
74. Gm16907 ENSMUSG00000097242 72 0.786 - - - - - 0.786 predicted gene, 16907 [Source:MGI Symbol;Acc:MGI:4439831]
75. Dmtn ENSMUSG00000022099 423 0.786 - - - - - 0.786 dematin actin binding protein [Source:MGI Symbol;Acc:MGI:99670]
76. Gm10600 ENSMUSG00000083929 123 0.784 - - - - - 0.784 predicted gene 10600 [Source:MGI Symbol;Acc:MGI:3710628]
77. Glce ENSMUSG00000032252 624 0.783 - 0.783 - - - - glucuronyl C5-epimerase [Source:MGI Symbol;Acc:MGI:2136405]
78. Gm10784 ENSMUSG00000094886 467 0.783 - - - - - 0.783 predicted pseudogene 10784 [Source:MGI Symbol;Acc:MGI:3642059]
79. Wrnip1 ENSMUSG00000021400 1189 0.783 - - - - - 0.783 Werner helicase interacting protein 1 [Source:MGI Symbol;Acc:MGI:1926153]
80. Lats1 ENSMUSG00000040021, ENSMUSG00000116422 859 0.783 - - - - - 0.783 large tumor suppressor [Source:MGI Symbol;Acc:MGI:1333883]
81. Fmr1 ENSMUSG00000000838 3241 0.782 - - - - - 0.782 fragile X mental retardation 1 [Source:MGI Symbol;Acc:MGI:95564]
82. Pggt1b ENSMUSG00000024477 511 0.781 - - - - - 0.781 protein geranylgeranyltransferase type I, beta subunit [Source:MGI Symbol;Acc:MGI:1917514]
83. Nanos3 ENSMUSG00000056155 51 0.778 - - 0.778 - - - nanos C2HC-type zinc finger 3 [Source:MGI Symbol;Acc:MGI:2675387]
84. Ccr7 ENSMUSG00000037944 33 0.775 - - - - - 0.775 chemokine (C-C motif) receptor 7 [Source:MGI Symbol;Acc:MGI:103011]
85. Cdk6 ENSMUSG00000040274 355 0.774 - - - - - 0.774 cyclin-dependent kinase 6 [Source:MGI Symbol;Acc:MGI:1277162]
86. Clu ENSMUSG00000022037 250 0.773 - - - - - 0.773 clusterin [Source:MGI Symbol;Acc:MGI:88423]
87. Bcap31 ENSMUSG00000002015 6908 0.772 - - - - - 0.772 B cell receptor associated protein 31 [Source:MGI Symbol;Acc:MGI:1350933]
88. Hmox2 ENSMUSG00000004070 527 0.772 - - - - - 0.772 heme oxygenase 2 [Source:MGI Symbol;Acc:MGI:109373]
89. Tysnd1 ENSMUSG00000020087 398 0.77 - - - - - 0.770 trypsin domain containing 1 [Source:MGI Symbol;Acc:MGI:1919017]
90. Lims1 ENSMUSG00000019920 3855 0.77 - - - - - 0.770 LIM and senescent cell antigen-like domains 1 [Source:MGI Symbol;Acc:MGI:1195263]
91. Ftx ENSMUSG00000086370 285 0.769 - - 0.769 - - - Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
92. Ly75 ENSMUSG00000026980 766 0.769 - - - - - 0.769 lymphocyte antigen 75 [Source:MGI Symbol;Acc:MGI:106662]
93. Ldoc1 ENSMUSG00000057615 72 0.769 - 0.769 - - - - regulator of NFKB signaling [Source:MGI Symbol;Acc:MGI:2685212]
94. Mtg2 ENSMUSG00000039069 792 0.769 - - - - - 0.769 mitochondrial ribosome associated GTPase 2 [Source:MGI Symbol;Acc:MGI:106565]
95. Plekha2 ENSMUSG00000031557 221 0.769 - - - - - 0.769 pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 [Source:MGI Symbol;Acc:MGI:1928144]
96. Gm11974 Gm11974 354 0.768 - - - - - 0.768
97. D19Ertd737e D19Ertd737e 808 0.768 - - - - - 0.768
98. Kbtbd2 ENSMUSG00000059486 936 0.764 - - - - - 0.764 kelch repeat and BTB (POZ) domain containing 2 [Source:MGI Symbol;Acc:MGI:2384811]
99. Arrdc4 ENSMUSG00000042659 543 0.764 - - - - - 0.764 arrestin domain containing 4 [Source:MGI Symbol;Acc:MGI:1913662]
100. Aunip ENSMUSG00000078521 282 0.764 - - - - - 0.764 aurora kinase A and ninein interacting protein [Source:MGI Symbol;Acc:MGI:1917135]

There are 110 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA