Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Actc1

Gene Name Gene ID Reads Annotation
Actc1 ENSMUSG00000068614 13555 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]







Genes with expression patterns similar to Actc1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Actc1 ENSMUSG00000068614 13555 6 1.000 1.000 1.000 1.000 1.000 1.000 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
2. Meox1 ENSMUSG00000001493 3105 3.875 - 0.835 0.873 0.708 0.709 0.750 mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220]
3. Myl1 ENSMUSG00000061816 2895 3.602 - - 0.857 0.894 0.931 0.920 myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
4. Myog ENSMUSG00000026459 855 3.453 - - 0.837 0.860 0.896 0.860 myogenin [Source:MGI Symbol;Acc:MGI:97276]
5. Fibin ENSMUSG00000074971 907 3.432 - - 0.876 0.793 0.915 0.848 fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
6. Tnnc2 ENSMUSG00000017300 2196 3.417 - - 0.906 0.793 0.902 0.816 troponin C2, fast [Source:MGI Symbol;Acc:MGI:98780]
7. Myh3 ENSMUSG00000020908 1729 3.414 - - 0.870 0.796 0.884 0.864 myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
8. Ttn ENSMUSG00000051747 3015 3.403 - - 0.784 0.865 0.864 0.890 titin [Source:MGI Symbol;Acc:MGI:98864]
9. Tpm2 ENSMUSG00000028464 1803 3.366 - - 0.774 0.875 0.897 0.820 tropomyosin 2, beta [Source:MGI Symbol;Acc:MGI:98810]
10. Casq2 ENSMUSG00000027861 587 3.366 - - 0.823 0.836 0.837 0.870 calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
11. Acta1 ENSMUSG00000031972 1386 3.35 - - 0.805 0.873 0.877 0.795 actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
12. Tnnt1 ENSMUSG00000064179 836 3.297 - - 0.720 0.812 0.906 0.859 troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
13. Ablim3 ENSMUSG00000032735 497 3.274 - - 0.853 0.805 0.805 0.811 actin binding LIM protein family, member 3 [Source:MGI Symbol;Acc:MGI:2442582]
14. Synpo2l ENSMUSG00000039376 565 3.266 - - 0.906 0.720 0.806 0.834 synaptopodin 2-like [Source:MGI Symbol;Acc:MGI:1916010]
15. Tnnt2 ENSMUSG00000026414 1982 3.192 - - 0.852 0.713 0.850 0.777 troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
16. Cryab ENSMUSG00000032060 732 3.178 - - 0.834 0.773 0.760 0.811 crystallin, alpha B [Source:MGI Symbol;Acc:MGI:88516]
17. Myf5 ENSMUSG00000000435 593 3.15 - - 0.814 0.719 0.753 0.864 myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252]
18. Mylpf ENSMUSG00000030672 5024 2.545 - - 0.708 0.896 0.941 - myosin light chain, phosphorylatable, fast skeletal muscle [Source:MGI Symbol;Acc:MGI:97273]
19. Neb ENSMUSG00000026950 948 2.521 - - - 0.793 0.926 0.802 nebulin [Source:MGI Symbol;Acc:MGI:97292]
20. Myl4 ENSMUSG00000061086 819 2.446 - - - 0.751 0.871 0.824 myosin, light polypeptide 4 [Source:MGI Symbol;Acc:MGI:97267]
21. Klhl41 ENSMUSG00000075307 333 2.382 - - 0.853 0.800 0.729 - kelch-like 41 [Source:MGI Symbol;Acc:MGI:2683854]
22. Tnnc1 ENSMUSG00000091898 572 2.366 - - - 0.709 0.853 0.804 troponin C, cardiac/slow skeletal [Source:MGI Symbol;Acc:MGI:98779]
23. Wnt5a ENSMUSG00000021994 2387 2.254 - - - 0.796 0.713 0.745 wingless-type MMTV integration site family, member 5A [Source:MGI Symbol;Acc:MGI:98958]
24. Cdkn1c ENSMUSG00000037664 49550 1.67 - - - - 0.796 0.874 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
25. Sln ENSMUSG00000042045 405 1.634 - - - - 0.869 0.765 sarcolipin [Source:MGI Symbol;Acc:MGI:1913652]
26. Arpp21 ENSMUSG00000032503 375 1.599 - - 0.793 - 0.806 - cyclic AMP-regulated phosphoprotein, 21 [Source:MGI Symbol;Acc:MGI:107562]
27. Myod1 ENSMUSG00000009471 536 1.593 - - - 0.761 0.832 - myogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:97275]
28. Srl ENSMUSG00000022519 577 1.572 - - - - 0.740 0.832 sarcalumenin [Source:MGI Symbol;Acc:MGI:2146620]
29. Foxd2 ENSMUSG00000055210 465 1.552 - - 0.757 - 0.795 - forkhead box D2 [Source:MGI Symbol;Acc:MGI:1347471]
30. Rbm24 ENSMUSG00000038132 634 1.541 - - - 0.704 0.837 - RNA binding motif protein 24 [Source:MGI Symbol;Acc:MGI:3610364]
31. Cdkn1a ENSMUSG00000023067 2571 1.54 - - - - 0.816 0.724 cyclin-dependent kinase inhibitor 1A (P21) [Source:MGI Symbol;Acc:MGI:104556]
32. Tnni1 ENSMUSG00000026418 1139 1.528 - - - - 0.708 0.820 troponin I, skeletal, slow 1 [Source:MGI Symbol;Acc:MGI:105073]
33. Cdh15 ENSMUSG00000031962 318 1.525 - - 0.789 - - 0.736 cadherin 15 [Source:MGI Symbol;Acc:MGI:106672]
34. Scx ENSMUSG00000034161 568 1.52 - - - - 0.762 0.758 scleraxis [Source:MGI Symbol;Acc:MGI:102934]
35. Tcf15 ENSMUSG00000068079 1156 1.519 - - 0.807 - 0.712 - transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664]
36. Hic1 ENSMUSG00000043099 2437 1.49 - - 0.728 - 0.762 - hypermethylated in cancer 1 [Source:MGI Symbol;Acc:MGI:1338010]
37. Sh3gl3 ENSMUSG00000030638 2388 1.487 - - 0.737 - 0.750 - SH3-domain GRB2-like 3 [Source:MGI Symbol;Acc:MGI:700011]
38. Ramp3 ENSMUSG00000041046 223 1.475 - - 0.747 - 0.728 - receptor (calcitonin) activity modifying protein 3 [Source:MGI Symbol;Acc:MGI:1860292]
39. Pygm ENSMUSG00000032648, ENSMUSG00000106877 531 1.475 - - 0.730 - 0.745 - muscle glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97830]
40. Tmem8c 204 1.453 - - - - 0.739 0.714 transmembrane protein 8C, transcript variant 1
41. Mylk4 ENSMUSG00000044951 196 1.444 - - - - 0.733 0.711 myosin light chain kinase family, member 4 [Source:MGI Symbol;Acc:MGI:3643758]
42. Mybpc1 ENSMUSG00000020061 396 1.438 - - - 0.704 0.734 - myosin binding protein C, slow-type [Source:MGI Symbol;Acc:MGI:1336213]
43. Cox6b1 ENSMUSG00000036751 12215 0.998 0.998 - - - - - cytochrome c oxidase, subunit 6B1 [Source:MGI Symbol;Acc:MGI:107460]
44. Zeb2 ENSMUSG00000026872 5611 0.995 0.995 - - - - - zinc finger E-box binding homeobox 2 [Source:MGI Symbol;Acc:MGI:1344407]
45. Efr3a ENSMUSG00000015002 5598 0.995 0.995 - - - - - EFR3 homolog A [Source:MGI Symbol;Acc:MGI:1923990]
46. Nudcd3 ENSMUSG00000053838 4641 0.995 0.995 - - - - - NudC domain containing 3 [Source:MGI Symbol;Acc:MGI:2144158]
47. Msh6 ENSMUSG00000005370 4347 0.995 0.995 - - - - - mutS homolog 6 [Source:MGI Symbol;Acc:MGI:1343961]
48. E130311K13Rik ENSMUSG00000048581 4352 0.995 0.995 - - - - - RIKEN cDNA E130311K13 gene [Source:MGI Symbol;Acc:MGI:3607716]
49. Vkorc1 ENSMUSG00000096145 6414 0.995 0.995 - - - - - vitamin K epoxide reductase complex, subunit 1 [Source:MGI Symbol;Acc:MGI:106442]
50. Fam151b ENSMUSG00000034334 2211 0.995 0.995 - - - - - family with sequence similarity 151, member B [Source:MGI Symbol;Acc:MGI:1921192]
51. Eps15 ENSMUSG00000028552 3437 0.995 0.995 - - - - - epidermal growth factor receptor pathway substrate 15 [Source:MGI Symbol;Acc:MGI:104583]
52. Mcc ENSMUSG00000071856 4024 0.995 0.995 - - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
53. Capn7 ENSMUSG00000021893 3215 0.995 0.995 - - - - - calpain 7 [Source:MGI Symbol;Acc:MGI:1338030]
54. Tspo ENSMUSG00000041736 2960 0.995 0.995 - - - - - translocator protein [Source:MGI Symbol;Acc:MGI:88222]
55. Ell ENSMUSG00000070002 2934 0.995 0.995 - - - - - elongation factor RNA polymerase II [Source:MGI Symbol;Acc:MGI:109377]
56. Nexn ENSMUSG00000039103 2837 0.995 0.995 - - - - - nexilin [Source:MGI Symbol;Acc:MGI:1916060]
57. Eif4e2 ENSMUSG00000026254 9053 0.994 0.994 - - - - - eukaryotic translation initiation factor 4E member 2 [Source:MGI Symbol;Acc:MGI:1914440]
58. Rfk ENSMUSG00000024712 5316 0.994 0.994 - - - - - riboflavin kinase [Source:MGI Symbol;Acc:MGI:1914688]
59. Rad51 ENSMUSG00000027323 4863 0.994 0.994 - - - - - RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890]
60. Snd1 ENSMUSG00000001424 7054 0.994 0.994 - - - - - staphylococcal nuclease and tudor domain containing 1 [Source:MGI Symbol;Acc:MGI:1929266]
61. Dpf2 ENSMUSG00000024826 10503 0.993 0.993 - - - - - D4, zinc and double PHD fingers family 2 [Source:MGI Symbol;Acc:MGI:109529]
62. Amot ENSMUSG00000041688 7133 0.993 0.993 - - - - - angiomotin [Source:MGI Symbol;Acc:MGI:108440]
63. Drosha ENSMUSG00000022191 6681 0.993 0.993 - - - - - drosha, ribonuclease type III [Source:MGI Symbol;Acc:MGI:1261425]
64. Gtf2i ENSMUSG00000060261 13970 0.993 0.993 - - - - - general transcription factor II I [Source:MGI Symbol;Acc:MGI:1202722]
65. Sdk2 ENSMUSG00000041592 3074 0.993 0.993 - - - - - sidekick cell adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:2443847]
66. Psme3 ENSMUSG00000078652 16638 0.991 0.991 - - - - - proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) [Source:MGI Symbol;Acc:MGI:1096366]
67. Ncl ENSMUSG00000026234 29206 0.991 0.991 - - - - - nucleolin [Source:MGI Symbol;Acc:MGI:97286]
68. Gna13 ENSMUSG00000020611 6315 0.99 0.990 - - - - - guanine nucleotide binding protein, alpha 13 [Source:MGI Symbol;Acc:MGI:95768]
69. Crabp1 ENSMUSG00000032291 40831 0.987 0.987 - - - - - cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
70. Nomo1 ENSMUSG00000030835 5074 0.987 0.987 - - - - - nodal modulator 1 [Source:MGI Symbol;Acc:MGI:2385850]
71. Chd4 ENSMUSG00000063870 11560 0.986 0.986 - - - - - chromodomain helicase DNA binding protein 4 [Source:MGI Symbol;Acc:MGI:1344380]
72. Rsl1d1 ENSMUSG00000005846 6507 0.982 0.982 - - - - - ribosomal L1 domain containing 1 [Source:MGI Symbol;Acc:MGI:1913659]
73. Cd24a ENSMUSG00000047139 33769 0.977 0.977 - - - - - CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
74. Cdc42 ENSMUSG00000006699 28155 0.974 0.974 - - - - - cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
75. U2af2 ENSMUSG00000030435 49812 0.969 0.969 - - - - - U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
76. Rpl39-ps ENSMUSG00000036305 39280 0.953 0.953 - - - - - ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
77. Fgf4 ENSMUSG00000050917 68 0.885 - - 0.885 - - - fibroblast growth factor 4 [Source:MGI Symbol;Acc:MGI:95518]
78. Osr1 ENSMUSG00000048387 855 0.832 - - - - 0.832 - odd-skipped related transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344424]
79. Lmod3 ENSMUSG00000044086 57 0.823 - - 0.823 - - - leiomodin 3 (fetal) [Source:MGI Symbol;Acc:MGI:2444169]
80. Unc45b ENSMUSG00000018845 221 0.821 - - 0.821 - - - unc-45 myosin chaperone B [Source:MGI Symbol;Acc:MGI:2443377]
81. Myh7 ENSMUSG00000053093 156 0.817 - - 0.817 - - - myosin, heavy polypeptide 7, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:2155600]
82. Myom3 ENSMUSG00000037139 72 0.814 - - 0.814 - - - myomesin family, member 3 [Source:MGI Symbol;Acc:MGI:2685280]
83. Tnnt3 ENSMUSG00000061723 274 0.806 - - 0.806 - - - troponin T3, skeletal, fast [Source:MGI Symbol;Acc:MGI:109550]
84. Col25a1 ENSMUSG00000058897 866 0.801 - - - - 0.801 - collagen, type XXV, alpha 1 [Source:MGI Symbol;Acc:MGI:1924268]
85. Chrnb1 ENSMUSG00000041189 253 0.798 - - - - 0.798 - cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) [Source:MGI Symbol;Acc:MGI:87890]
86. Fap ENSMUSG00000000392 275 0.795 - - 0.795 - - - fibroblast activation protein [Source:MGI Symbol;Acc:MGI:109608]
87. Pgam2 ENSMUSG00000020475 99 0.791 - - 0.791 - - - phosphoglycerate mutase 2 [Source:MGI Symbol;Acc:MGI:1933118]
88. Ache ENSMUSG00000023328 165 0.786 - - 0.786 - - - acetylcholinesterase [Source:MGI Symbol;Acc:MGI:87876]
89. Cox6a2 ENSMUSG00000030785 138 0.784 - - 0.784 - - - cytochrome c oxidase subunit 6A2 [Source:MGI Symbol;Acc:MGI:104649]
90. Acta2 ENSMUSG00000035783 20132 0.783 - - - 0.783 - - actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
91. Grin3a ENSMUSG00000039579 433 0.773 - - - - 0.773 - glutamate receptor ionotropic, NMDA3A [Source:MGI Symbol;Acc:MGI:1933206]
92. Mybph ENSMUSG00000042451 38 0.772 - - 0.772 - - - myosin binding protein H [Source:MGI Symbol;Acc:MGI:1858196]
93. 9130206I24Rik 9130206I24Rik 386 0.762 - - - 0.762 - -
94. Dusp6 ENSMUSG00000019960 2365 0.759 - - - - 0.759 - dual specificity phosphatase 6 [Source:MGI Symbol;Acc:MGI:1914853]
95. Cpa2 ENSMUSG00000071553 495 0.759 - - - - - 0.759 carboxypeptidase A2, pancreatic [Source:MGI Symbol;Acc:MGI:3617840]
96. Actn2 ENSMUSG00000052374 152 0.745 - - 0.745 - - - actinin alpha 2 [Source:MGI Symbol;Acc:MGI:109192]
97. Gm7325 89 0.745 - - 0.745 - - - predicted gene 7325, transcript variant X2
98. Cbr2 ENSMUSG00000025150 318 0.743 - - - - - 0.743 carbonyl reductase 2 [Source:MGI Symbol;Acc:MGI:107200]
99. Emx2 ENSMUSG00000043969 863 0.742 - - - 0.742 - - empty spiracles homeobox 2 [Source:MGI Symbol;Acc:MGI:95388]
100. Hfe2 ENSMUSG00000038403 372 0.742 - - 0.742 - - - hemochromatosis type 2 (juvenile) [Source:MGI Symbol;Acc:MGI:1916835]

There are 19 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA