Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATXN3

Gene Name Gene ID Reads Annotation
ATXN3 ENSDARG00000099274 181 ataxin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-983]










Genes with expression patterns similar to ATXN3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ATXN3 ENSDARG00000099274 181 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ataxin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-983]
2. poln ENSDARG00000103961, ENSDARG00000113911 57 1.577 - 0.716 - - - - 0.861 - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
3. CR774186.2 CR774186.2 104 1.498 0.782 0.716 - - - - - - -
4. ttc25_1 ENSDARG00000058140 32 1.485 - 0.716 - - - - 0.769 - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
5. GPR101 ENSDARG00000039218 157 1.403 0.700 - - - - - 0.703 - - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
6. EGR4 ENSDARG00000077799 34 0.955 - - - - - - 0.955 - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
7. ush1c ENSDARG00000051876, ENSDARG00000112799 25 0.923 - 0.923 - - - - - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
8. nudt4a ENSDARG00000057767, ENSDARG00000110626 106 0.919 - 0.919 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4a [Source:ZFIN;Acc:ZDB-GENE-031010-33]
9. GPRC5B GPRC5B 897 0.911 - 0.911 - - - - - - -
10. DEAF1 ENSDARG00000088844 380 0.906 - 0.906 - - - - - - - DEAF1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-081022-163]
11. NHSL2 ENSDARG00000089066 374 0.904 - 0.904 - - - - - - - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
12. dfna5 dfna5 361 0.899 - 0.899 - - - - - - -
13. srgap2b srgap2b 80 0.896 - - - - - - 0.896 - -
14. DHX32 DHX32 181 0.896 - - - - - - 0.896 - -
15. pnpo ENSDARG00000017612, ENSDARG00000109509 570 0.895 - 0.895 - - - - - - - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
16. lrrc4bb ENSDARG00000014792 47 0.894 - - - - - - 0.894 - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
17. CABZ01041604.1 ENSDARG00000059854 35 0.894 - - - - - - 0.894 - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
18. cacna1c ENSDARG00000008398 193 0.892 - - - - - - 0.892 - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
19. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 0.891 - - - - - - 0.891 - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
20. chst1 ENSDARG00000088593, ENSDARG00000112011 102 0.89 - - - - - - 0.890 - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
21. SURF2 ENSDARG00000112476 592 0.888 - 0.888 - - - - - - - surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
22. lzts3b ENSDARG00000058558 166 0.883 - - - - - - 0.883 - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
23. sema3d ENSDARG00000017369 212 0.881 - - - - - - 0.881 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
24. gtf3aa ENSDARG00000030267 217 0.88 - 0.880 - - - - - - - general transcription factor IIIAa [Source:ZFIN;Acc:ZDB-GENE-041006-1]
25. sgca ENSDARG00000074156 2418 0.878 - 0.878 - - - - - - - sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
26. SLC16A3 ENSDARG00000045051 83 0.877 - - - - - - 0.877 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
27. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.874 - 0.874 - - - - - - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
28. C5H4orf22 C5H4orf22 117 0.871 - - - - - - 0.871 - -
29. si:ch73-362m14.4 ENSDARG00000023940 88 0.871 - - - - - - 0.871 - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
30. CCDC150 CCDC150 991 0.871 - - - - - - 0.871 - -
31. si:ch211-162i8.6 si:ch211-162i8.6 15 0.87 - 0.870 - - - - - - -
32. mcph1 ENSDARG00000058372 51 0.869 - 0.869 - - - - - - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
33. avpr2l ENSDARG00000076690 3 0.869 - 0.869 - - - - - - - arginine vasopressin receptor 2, like [Source:ZFIN;Acc:ZDB-GENE-070705-429]
34. kcnab2b ENSDARG00000062134 80 0.869 - 0.869 - - - - - - - potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
35. foxh1 ENSDARG00000055630 10 0.869 - 0.869 - - - - - - - forkhead box H1 [Source:ZFIN;Acc:ZDB-GENE-000616-15]
36. COL26A1 COL26A1 9 0.869 - 0.869 - - - - - - -
37. CR847990.1 CR847990.1 21 0.868 - - - - - - 0.868 - -
38. C9H2orf69 C9H2orf69 148 0.867 - 0.867 - - - - - - -
39. apof ENSDARG00000090980 145 0.867 - - - - - - 0.867 - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
40. ADAMTSL4 ENSDARG00000063407 1045 0.866 - 0.866 - - - - - - - ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
41. BX842614.2 BX842614.2 799 0.866 - 0.866 - - - - - - -
42. ift88 ENSDARG00000027234, ENSDARG00000113909 168 0.866 - 0.866 - - - - - - - intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]
43. si:ch211-181d7.3 ENSDARG00000068621 87 0.865 0.865 - - - - - - - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
44. supt7l ENSDARG00000013461 41 0.862 - 0.862 - - - - - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
45. SYTL2 SYTL2 139 0.862 - 0.862 - - - - - - -
46. CT573393.1 CT573393.1 97 0.862 - 0.862 - - - - - - -
47. crfb1 ENSDARG00000068681, ENSDARG00000111369, ENSDARG00000112496 75 0.862 - 0.862 - - - - - - - cytokine receptor family member b1 [Source:ZFIN;Acc:ZDB-GENE-030131-8673]
48. TRIM46 TRIM46 73 0.862 - 0.862 - - - - - - -
49. RBBP6_2 RBBP6_2 23 0.862 - 0.862 - - - - - - -
50. si:ch73-167f18.4 si:ch73-167f18.4 9 0.862 - 0.862 - - - - - - -
51. fam160b1 ENSDARG00000060168 22 0.862 - 0.862 - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
52. TTYH1 ENSDARG00000076804 399 0.862 - 0.862 - - - - - - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
53. znf532 ENSDARG00000052894 118 0.862 - 0.862 - - - - - - - zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]
54. tas1r3 ENSDARG00000006341 3 0.861 - - - - - - 0.861 - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
55. si:dkey-199m13.2 si:dkey-199m13.2 31 0.861 - - - - - - 0.861 - -
56. BX511270.1 BX511270.1 25 0.861 - - - - - - 0.861 - -
57. ONECUT2 ENSDARG00000090387 8 0.861 - - - - - - 0.861 - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
58. slc5a5 ENSDARG00000005392 6 0.861 - - - - - - 0.861 - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
59. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 0.861 - - - - - - 0.861 - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
60. si:dkey-52j6.1 si:dkey-52j6.1 3 0.861 - - - - - - 0.861 - -
61. CABZ01069022.1 ENSDARG00000105692 16 0.861 - - - - - - 0.861 - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
62. gsdf ENSDARG00000075301 6 0.861 - - - - - - 0.861 - - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
63. LRFN2_1 LRFN2_1 17 0.861 - - - - - - 0.861 - -
64. si:ch211-190g11.1 si:ch211-190g11.1 0 0.861 - - - - - - 0.861 - -
65. zgc:165525 zgc:165525 207 0.861 - - - - - - 0.861 - -
66. CR318629.1 CR318629.1 7 0.861 - - - - - - 0.861 - -
67. ptprja ENSDARG00000033042 25 0.861 - - - - - - 0.861 - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
68. FNDC3A ENSDARG00000105503 11 0.861 - - - - - - 0.861 - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
69. slc26a6 ENSDARG00000055835, ENSDARG00000097292 66 0.861 - - - - - - 0.861 - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
70. si:dkey-216e24.4 si:dkey-216e24.4 14 0.861 - - - - - - 0.861 - -
71. sec22bb ENSDARG00000100435 33 0.861 - - - - - - 0.861 - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
72. CT826375.4 CT826375.4 3 0.861 - - - - - - 0.861 - -
73. snx21 ENSDARG00000062770, ENSDARG00000111065 9 0.861 - - - - - - 0.861 - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
74. CABZ01113374.2 CABZ01113374.2 27 0.861 - - - - - - 0.861 - -
75. si:dkey-208n4.1 si:dkey-208n4.1 10 0.861 - - - - - - 0.861 - -
76. PDE4B PDE4B 13 0.861 - - - - - - 0.861 - -
77. si:ch211-157l15.4 si:ch211-157l15.4 92 0.861 - - - - - - 0.861 - -
78. CABZ01075242.1 ENSDARG00000114227 9 0.861 - - - - - - 0.861 - -
79. si:ch211-155d24.7 si:ch211-155d24.7 17 0.861 - - - - - - 0.861 - -
80. ela3l ENSDARG00000007276 11 0.861 - - - - - - 0.861 - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
81. irx7 ENSDARG00000002601 72 0.861 - - - - - - 0.861 - - iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
82. BX322612.1 BX322612.1 236 0.861 - - - - - - 0.861 - -
83. aff4 ENSDARG00000001857 134 0.861 - - - - - - 0.861 - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
84. sfxn5a ENSDARG00000103595 11 0.861 - - - - - - 0.861 - - sideroflexin 5a [Source:ZFIN;Acc:ZDB-GENE-090312-174]
85. pak1 ENSDARG00000103959 32 0.861 - - - - - - 0.861 - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
86. fkbp1ab ENSDARG00000033567, ENSDARG00000110465, ENSDARG00000116437 83 0.861 - - - - - - 0.861 - - FK506 binding protein 1Ab [Source:ZFIN;Acc:ZDB-GENE-040927-9]
87. SLC44A1 SLC44A1 43 0.861 - - - - - - 0.861 - -
88. si:dkey-241l7.2 ENSDARG00000105335 6 0.861 - - - - - - 0.861 - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
89. si:ch211-187f22.2 si:ch211-187f22.2 7 0.861 - - - - - - 0.861 - -
90. si:ch211-57m13.10 ENSDARG00000095902 1 0.861 - - - - - - 0.861 - - si:ch211-57m13.10 [Source:ZFIN;Acc:ZDB-GENE-110411-264]
91. syt15 ENSDARG00000079926 8 0.861 - - - - - - 0.861 - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
92. si:dkey-103e21.5 ENSDARG00000091926, ENSDARG00000110300 12 0.861 - - - - - - 0.861 - - si:dkey-103e21.5 [Source:ZFIN;Acc:ZDB-GENE-060526-186]
93. NEK11 ENSDARG00000087564 40 0.861 - - - - - - 0.861 - - NIMA-related kinase 11 [Source:ZFIN;Acc:ZDB-GENE-100922-73]
94. DLG4 3 0.861 - - - - - - 0.861 - - discs large MAGUK scaffold protein 4, transcript variant X5
95. CABZ01071446.1 CABZ01071446.1 4 0.861 - - - - - - 0.861 - -
96. VSTM2A ENSDARG00000021909 0 0.861 - - - - - - 0.861 - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
97. KCNN2 ENSDARG00000014939 25 0.861 - - - - - - 0.861 - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
98. si:ch73-138e16.2 ENSDARG00000104894 1 0.861 - - - - - - 0.861 - - si:ch73-138e16.2 [Source:ZFIN;Acc:ZDB-GENE-070705-201]
99. hcar1-4 ENSDARG00000087084, ENSDARG00000113450 27 0.861 - - - - - - 0.861 - - hydroxycarboxylic acid receptor 1-4 [Source:ZFIN;Acc:ZDB-GENE-111111-10]
100. mapk9 ENSDARG00000077364 38 0.861 - - - - - - 0.861 - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]

There are 467 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA