Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATXN3

Gene Name Gene ID Reads Annotation
ATXN3 ENSDARG00000099274 181 ataxin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-983]










Genes with expression patterns similar to ATXN3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ATXN3 ENSDARG00000099274 181 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ataxin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-983]
2. poln ENSDARG00000103961, ENSDARG00000113911 57 1.577 - 0.716 - - - - 0.861 - - polymerase (DNA directed) nu [Source:ZFIN;Acc:ZDB-GENE-100917-1]
3. CR774186.2 CR774186.2 104 1.498 0.782 0.716 - - - - - - -
4. ttc25_1 ENSDARG00000058140 32 1.485 - 0.716 - - - - 0.769 - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
5. GPR101 ENSDARG00000039218 157 1.403 0.700 - - - - - 0.703 - - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
6. EGR4 ENSDARG00000077799 34 0.955 - - - - - - 0.955 - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
7. ush1c ENSDARG00000051876, ENSDARG00000112799 25 0.923 - 0.923 - - - - - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
8. nudt4a ENSDARG00000057767, ENSDARG00000110626 106 0.919 - 0.919 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4a [Source:ZFIN;Acc:ZDB-GENE-031010-33]
9. GPRC5B GPRC5B 897 0.911 - 0.911 - - - - - - -
10. DEAF1 ENSDARG00000088844 380 0.906 - 0.906 - - - - - - - DEAF1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-081022-163]
11. NHSL2 ENSDARG00000089066 374 0.904 - 0.904 - - - - - - - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
12. dfna5 dfna5 361 0.899 - 0.899 - - - - - - -
13. DHX32 DHX32 181 0.896 - - - - - - 0.896 - -
14. srgap2b srgap2b 80 0.896 - - - - - - 0.896 - -
15. pnpo ENSDARG00000017612, ENSDARG00000109509 570 0.895 - 0.895 - - - - - - - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
16. CABZ01041604.1 ENSDARG00000059854 35 0.894 - - - - - - 0.894 - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
17. lrrc4bb ENSDARG00000014792 47 0.894 - - - - - - 0.894 - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
18. cacna1c ENSDARG00000008398 193 0.892 - - - - - - 0.892 - - calcium channel, voltage-dependent, L type, alpha 1C subunit [Source:ZFIN;Acc:ZDB-GENE-020129-1]
19. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 0.891 - - - - - - 0.891 - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
20. chst1 ENSDARG00000088593, ENSDARG00000112011 102 0.89 - - - - - - 0.890 - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
21. SURF2 ENSDARG00000112476 592 0.888 - 0.888 - - - - - - - surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
22. lzts3b ENSDARG00000058558 166 0.883 - - - - - - 0.883 - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
23. sema3d ENSDARG00000017369 212 0.881 - - - - - - 0.881 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:ZFIN;Acc:ZDB-GENE-990715-2]
24. gtf3aa ENSDARG00000030267 217 0.88 - 0.880 - - - - - - - general transcription factor IIIAa [Source:ZFIN;Acc:ZDB-GENE-041006-1]
25. sgca ENSDARG00000074156 2418 0.878 - 0.878 - - - - - - - sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]
26. SLC16A3 ENSDARG00000045051 83 0.877 - - - - - - 0.877 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
27. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.874 - 0.874 - - - - - - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
28. CCDC150 CCDC150 991 0.871 - - - - - - 0.871 - -
29. si:ch73-362m14.4 ENSDARG00000023940 88 0.871 - - - - - - 0.871 - - si:ch73-362m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-30]
30. C5H4orf22 C5H4orf22 117 0.871 - - - - - - 0.871 - -
31. si:ch211-162i8.6 si:ch211-162i8.6 15 0.87 - 0.870 - - - - - - -
32. COL26A1 COL26A1 9 0.869 - 0.869 - - - - - - -
33. foxh1 ENSDARG00000055630 10 0.869 - 0.869 - - - - - - - forkhead box H1 [Source:ZFIN;Acc:ZDB-GENE-000616-15]
34. kcnab2b ENSDARG00000062134 80 0.869 - 0.869 - - - - - - - potassium voltage-gated channel, shaker-related subfamily, beta member 2 b [Source:ZFIN;Acc:ZDB-GENE-080219-36]
35. avpr2l ENSDARG00000076690 3 0.869 - 0.869 - - - - - - - arginine vasopressin receptor 2, like [Source:ZFIN;Acc:ZDB-GENE-070705-429]
36. mcph1 ENSDARG00000058372 51 0.869 - 0.869 - - - - - - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
37. CR847990.1 CR847990.1 21 0.868 - - - - - - 0.868 - -
38. apof ENSDARG00000090980 145 0.867 - - - - - - 0.867 - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
39. C9H2orf69 C9H2orf69 148 0.867 - 0.867 - - - - - - -
40. ift88 ENSDARG00000027234, ENSDARG00000113909 168 0.866 - 0.866 - - - - - - - intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]
41. BX842614.2 BX842614.2 799 0.866 - 0.866 - - - - - - -
42. ADAMTSL4 ENSDARG00000063407 1045 0.866 - 0.866 - - - - - - - ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]
43. si:ch211-181d7.3 ENSDARG00000068621 87 0.865 0.865 - - - - - - - - si:ch211-181d7.3 [Source:ZFIN;Acc:ZDB-GENE-121214-30]
44. znf532 ENSDARG00000052894 118 0.862 - 0.862 - - - - - - - zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]
45. fam160b1 ENSDARG00000060168 22 0.862 - 0.862 - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
46. TTYH1 ENSDARG00000076804 399 0.862 - 0.862 - - - - - - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
47. si:ch73-167f18.4 si:ch73-167f18.4 9 0.862 - 0.862 - - - - - - -
48. RBBP6_2 RBBP6_2 23 0.862 - 0.862 - - - - - - -
49. CT573393.1 CT573393.1 97 0.862 - 0.862 - - - - - - -
50. TRIM46 TRIM46 73 0.862 - 0.862 - - - - - - -
51. crfb1 ENSDARG00000068681, ENSDARG00000111369, ENSDARG00000112496 75 0.862 - 0.862 - - - - - - - cytokine receptor family member b1 [Source:ZFIN;Acc:ZDB-GENE-030131-8673]
52. supt7l ENSDARG00000013461 41 0.862 - 0.862 - - - - - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
53. SYTL2 SYTL2 139 0.862 - 0.862 - - - - - - -
54. SGCZ ENSDARG00000106258 2 0.861 - - - - - - 0.861 - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
55. elovl2 ENSDARG00000045414 119 0.861 - - - - - - 0.861 - - ELOVL fatty acid elongase 2 [Source:ZFIN;Acc:ZDB-GENE-060421-5612]
56. figf 48 0.861 - - - - - - 0.861 - - c-fos induced growth factor, transcript variant X2
57. hepacam 73 0.861 - - - - - - 0.861 - - hepatic and glial cell adhesion molecule, transcript variant X2
58. nts ENSDARG00000057887 5 0.861 - - - - - - 0.861 - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
59. tbx6 ENSDARG00000011785 132 0.861 - - - - - - 0.861 - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
60. PAMR1 ENSDARG00000093480 40 0.861 - - - - - - 0.861 - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
61. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 0.861 - - - - - - 0.861 - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
62. CT573256.1 ENSDARG00000091657 18 0.861 - - - - - - 0.861 - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
63. SLITRK1 2 0.861 - - - - - - 0.861 - - SLIT and NTRK like family member 1
64. C17orf105 C17orf105 1 0.861 - - - - - - 0.861 - -
65. MFAP4 ENSDARG00000090783 8 0.861 - - - - - - 0.861 - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
66. si:dkey-31f5.8 ENSDARG00000094428 2 0.861 - - - - - - 0.861 - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
67. si:dkey-264b2.3 19 0.861 - - - - - - 0.861 - - si:dkey-264b2.3, transcript variant X2
68. si:dkey-241l7.10 si:dkey-241l7.10 38 0.861 - - - - - - 0.861 - -
69. zglp1 ENSDARG00000067669 6 0.861 - - - - - - 0.861 - - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
70. syngr2b_1 ENSDARG00000104470 24 0.861 - - - - - - 0.861 - - synaptogyrin 2b [Source:ZFIN;Acc:ZDB-GENE-070424-19]
71. sostdc1a ENSDARG00000068892 127 0.861 - - - - - - 0.861 - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
72. PEG3_20 PEG3_20 6 0.861 - - - - - - 0.861 - -
73. rx1 ENSDARG00000071684 247 0.861 - - - - - - 0.861 - - retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
74. zgc:92590 ENSDARG00000040282 13 0.861 - - - - - - 0.861 - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
75. PLA2R1 ENSDARG00000077474 45 0.861 - - - - - - 0.861 - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
76. cacna2d2 cacna2d2 16 0.861 - - - - - - 0.861 - -
77. TMEM255A ENSDARG00000073911 924 0.861 - 0.861 - - - - - - - transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
78. FAM83F FAM83F 8 0.861 - - - - - - 0.861 - -
79. ZNF337_11 ZNF337_11 11 0.861 - - - - - - 0.861 - -
80. tekt3 ENSDARG00000045038 9 0.861 - - - - - - 0.861 - - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
81. CABZ01078314.1 CABZ01078314.1 44 0.861 - - - - - - 0.861 - -
82. chd5 ENSDARG00000105083 132 0.861 - - - - - - 0.861 - - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
83. pdcl ENSDARG00000009480 12 0.861 - - - - - - 0.861 - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
84. CCHCR1_1 CCHCR1_1 1 0.861 - - - - - - 0.861 - -
85. si:rp71-20i5.5 si:rp71-20i5.5 9 0.861 - - - - - - 0.861 - -
86. znrf2b ENSDARG00000098792 0 0.861 - - - - - - 0.861 - - zinc and ring finger 2b [Source:ZFIN;Acc:ZDB-GENE-060929-24]
87. ME1 ENSDARG00000053215 8 0.861 - - - - - - 0.861 - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
88. il12a ENSDARG00000038878 3 0.861 - - - - - - 0.861 - - interleukin 12a [Source:ZFIN;Acc:ZDB-GENE-060724-1]
89. hcar1-4 ENSDARG00000087084, ENSDARG00000113450 27 0.861 - - - - - - 0.861 - - hydroxycarboxylic acid receptor 1-4 [Source:ZFIN;Acc:ZDB-GENE-111111-10]
90. hcn3 ENSDARG00000027192 6 0.861 - - - - - - 0.861 - - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:ZFIN;Acc:ZDB-GENE-060503-193]
91. mapk9 ENSDARG00000077364 38 0.861 - - - - - - 0.861 - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
92. CU459152.1 CU459152.1 407 0.861 - - - - - - 0.861 - -
93. akt3a ENSDARG00000104810 21 0.861 - - - - - - 0.861 - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
94. si:dkey-4c15.12 ENSDARG00000095350 119 0.861 - - - - - - 0.861 - - si:dkey-4c15.12 [Source:ZFIN;Acc:ZDB-GENE-050420-351]
95. slc44a1a ENSDARG00000015946 10 0.861 - - - - - - 0.861 - - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
96. knca7 17 0.861 - - - - - - 0.861 - - potassium voltage-gated channel, shaker-related subfamily, member 7
97. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 0.861 - - - - - - 0.861 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
98. CABZ01088927.1 CABZ01088927.1 0 0.861 - - - - - - 0.861 - -
99. DLG4 3 0.861 - - - - - - 0.861 - - discs large MAGUK scaffold protein 4, transcript variant X5
100. si:dkey-103e21.5 ENSDARG00000091926, ENSDARG00000110300 12 0.861 - - - - - - 0.861 - - si:dkey-103e21.5 [Source:ZFIN;Acc:ZDB-GENE-060526-186]

There are 467 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA