Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATXN1

Gene Name Gene ID Reads Annotation
ATXN1 ATXN1 12










Genes with expression patterns similar to ATXN1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ATXN1 ATXN1 12 6 1.000 1.000 1.000 1.000 1.000 - 1.000 - -
2. si:ch73-62b13.1 ENSDARG00000093269 11 1.943 - 1.000 0.943 - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
3. CABZ01034707.1 CABZ01034707.1 122 1.91 0.910 - - - - - 1.000 - -
4. ccdc129 37 1.91 0.910 1.000 - - - - - - - coiled-coil domain containing 129, transcript variant X2
5. echdc1 68 1.91 0.910 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
6. MSH4 ENSDARG00000075826 37 1.91 0.910 1.000 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
7. si:ch211-195i24.1 si:ch211-195i24.1 10 1.91 0.910 1.000 - - - - - - -
8. matn3a ENSDARG00000069245 2410 1.91 0.910 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
9. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1.91 0.910 1.000 - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
10. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.872 0.910 - 0.962 - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
11. pax4 ENSDARG00000021336 29 1.864 - 1.000 - - 0.864 - - - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
12. arih1l ENSDARG00000036870, ENSDARG00000112965 82 1.843 - 1.000 - - 0.843 - - - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
13. CR383676.3_2 CR383676.3_2 9 1.828 - 0.917 0.911 - - - - - -
14. slc52a2 ENSDARG00000102035 57 1.806 - - - - 0.871 - 0.935 - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
15. si:ch211-150j10.4 ENSDARG00000079336 23 1.799 0.910 - - - 0.889 - - - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
16. slc43a3a ENSDARG00000059682 27 1.771 - 1.000 0.771 - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
17. dhcr24 ENSDARG00000013236 61 1.732 - 1.000 - - 0.732 - - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
18. pcdh8 ENSDARG00000006467 317 1.725 - 1.000 - - - - 0.725 - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
19. si:ch211-259i2.2 si:ch211-259i2.2 45 1.716 0.716 - 1.000 - - - - - -
20. si:ch211-80h18.1 ENSDARG00000078522 1941 1.715 0.910 - - - - - 0.805 - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
21. DUSP13_1 DUSP13_1 425 1.711 0.910 - 0.801 - - - - - -
22. aven ENSDARG00000002894 49 1.71 0.910 - - - - - 0.800 - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
23. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1.71 0.910 - - - - - 0.800 - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
24. si:ch211-162i8.2 ENSDARG00000096041 4 1.703 - 1.000 - 0.703 - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
25. CR788231.1 CR788231.1 61 1.698 - - - - 0.898 - 0.800 - -
26. CDH12 CDH12 44 1.695 0.948 0.747 - - - - - - -
27. agxt2 ENSDARG00000100709 799 1.681 - - - - 0.737 - 0.944 - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
28. fgf20b ENSDARG00000086070 13 1.679 - - 0.973 - - - 0.706 - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
29. si:dkey-97l20.5 si:dkey-97l20.5 33 1.669 0.948 - - - - - 0.721 - -
30. tnmd ENSDARG00000052615 42 1.661 - - 0.911 - - - 0.750 - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
31. nphs1 ENSDARG00000060758 5 1.65 - - 0.850 - - - 0.800 - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
32. CABZ01072557.1 CABZ01072557.1 9 1.639 0.910 0.729 - - - - - - -
33. b3gntl1 ENSDARG00000043431 50 1.625 0.910 - - - 0.715 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
34. ccdc169 ENSDARG00000089570 101 1.62 - - - - 0.758 - 0.862 - - coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
35. CU183952.1 CU183952.1 32 1.616 0.910 - - - - - 0.706 - -
36. PPP1R16B ENSDARG00000079860 390 1.615 0.738 - - - - - 0.877 - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
37. nanos3 ENSDARG00000068255 319 1.573 - 0.747 - - - - 0.826 - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
38. fbxl18 ENSDARG00000007443, ENSDARG00000113264 178 1.554 0.789 - - - 0.765 - - - - F-box and leucine-rich repeat protein 18 [Source:ZFIN;Acc:ZDB-GENE-050913-65]
39. TMEM121_1 TMEM121_1 22 1.545 - - 0.780 - - - 0.765 - -
40. cep76 ENSDARG00000058319 143 1.54 - 0.809 - - 0.731 - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
41. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.518 - - - - 0.731 - 0.787 - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
42. zgc:162184 ENSDARG00000077217 47 1.509 - 0.729 - - 0.780 - - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
43. rhof ENSDARG00000054389, ENSDARG00000111798 15 1.509 - - 0.709 - - - 0.800 - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
44. si:dkey-45k15.1 ENSDARG00000061714 32 1.503 - - - 0.703 - - 0.800 - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
45. fancf ENSDARG00000019250 111 1 - 1.000 - - - - - - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
46. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
47. eno4 ENSDARG00000070598 78 1 - 1.000 - - - - - - - enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
48. si:ch211-186e20.2 ENSDARG00000074712 0 1 - 1.000 - - - - - - - si:ch211-186e20.2 [Source:ZFIN;Acc:ZDB-GENE-110407-8]
49. DHX32 DHX32 181 1 - 1.000 - - - - - - -
50. glra4b ENSDARG00000058103 0 1 - 1.000 - - - - - - - glycine receptor, alpha 4b [Source:ZFIN;Acc:ZDB-GENE-020402-2]
51. ankrd45 ENSDARG00000011326 62 1 - 1.000 - - - - - - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
52. slc2a5 ENSDARG00000077875 5 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
53. KLF10 1 1 - 1.000 - - - - - - - Kruppel-like factor 10
54. ano8a ENSDARG00000076265 20 1 - 1.000 - - - - - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
55. BX548047.2 ENSDARG00000115500 17 1 - 1.000 - - - - - - -
56. scara3 ENSDARG00000008060 169 1 - 1.000 - - - - - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
57. si:ch73-44m9.3 ENSDARG00000040640, ENSDARG00000100357 3 1 - 1.000 - - - - - - - si:ch73-44m9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-290]
58. snx1b ENSDARG00000103529 4 1 - 1.000 - - - - - - - sorting nexin 1b [Source:ZFIN;Acc:ZDB-GENE-050913-82]
59. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
60. prph2a ENSDARG00000038018 2 1 - 1.000 - - - - - - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
61. CR628323.3 ENSDARG00000106158 1 1 - 1.000 - - - - - - - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
62. PEG3_19 PEG3_19 29 1 - 1.000 - - - - - - -
63. cspg5b ENSDARG00000099793 67 1 - 1.000 - - - - - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
64. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - 1.000 - - - - - - -
65. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
66. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - 1.000 - - - - - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
67. CCNO 21 1 - 1.000 - - - - - - - cyclin O
68. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
69. clcn1a ENSDARG00000062084 120 1 - 1.000 - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
70. CU928220.1 CU928220.1 146 1 - 1.000 - - - - - - -
71. USH1G USH1G 25 1 - 1.000 - - - - - - -
72. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
73. slc18b1 ENSDARG00000044047 7 1 - 1.000 - - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
74. rasl12 ENSDARG00000002701 66 1 - 1.000 - - - - - - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
75. SUSD4 ENSDARG00000026335 195 1 - 1.000 - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
76. si:rp71-45g20.6 si:rp71-45g20.6 19 1 - 1.000 - - - - - - -
77. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
78. si:ch211-120c15.3 ENSDARG00000101807 19 1 - 1.000 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
79. elfn1b ENSDARG00000074372 25 1 - 1.000 - - - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
80. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - 1.000 - - - - - - -
81. mir30b 4 1 - 1.000 - - - - - - - microRNA 30b
82. CABZ01086292.1 CABZ01086292.1 1 1 - - 1.000 - - - - - -
83. TSPAN1 ENSDARG00000052027 4 1 - - 1.000 - - - - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
84. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
85. ptger4a ENSDARG00000059236 13 1 - 1.000 - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
86. si:dkeyp-20e4.9 si:dkeyp-20e4.9 3 1 - - 1.000 - - - - - -
87. ctskl ctskl 17 1 - 1.000 - - - - - - -
88. nobox 5 1 - 1.000 - - - - - - - NOBOX oogenesis homeobox
89. C1GALT1_1 C1GALT1_1 1 1 - 1.000 - - - - - - -
90. DBNDD1 DBNDD1 43 1 - 1.000 - - - - - - -
91. APEX2 ENSDARG00000008472 7 1 - 1.000 - - - - - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
92. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
93. si:ch211-272h9.5 ENSDARG00000092167 8 1 - 1.000 - - - - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
94. drd2a ENSDARG00000056926 40 1 - 1.000 - - - - - - - dopamine receptor D2a [Source:ZFIN;Acc:ZDB-GENE-021119-2]
95. fgd5a ENSDARG00000088801 3 1 - 1.000 - - - - - - - FYVE, RhoGEF and PH domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-090428-3]
96. sebox ENSDARG00000042526 2 1 - 1.000 - - - - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
97. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - 1.000 - - - - - -
98. CU693369.1 CU693369.1 2 1 - 1.000 - - - - - - -
99. si:dkey-77f17.1 si:dkey-77f17.1 83 1 - 1.000 - - - - - - -
100. im:7151068 im:7151068 2 1 - 1.000 - - - - - - -

There are 1019 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA