Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATXN1

Gene Name Gene ID Reads Annotation
ATXN1 ATXN1 12










Genes with expression patterns similar to ATXN1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ATXN1 ATXN1 12 6 1.000 1.000 1.000 1.000 1.000 - 1.000 - -
2. si:ch73-62b13.1 ENSDARG00000093269 11 1.943 - 1.000 0.943 - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
3. si:ch211-195i24.1 si:ch211-195i24.1 10 1.91 0.910 1.000 - - - - - - -
4. MSH4 ENSDARG00000075826 37 1.91 0.910 1.000 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
5. ccdc129 37 1.91 0.910 1.000 - - - - - - - coiled-coil domain containing 129, transcript variant X2
6. echdc1 68 1.91 0.910 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
7. matn3a ENSDARG00000069245 2410 1.91 0.910 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
8. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1.91 0.910 1.000 - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
9. CABZ01034707.1 CABZ01034707.1 122 1.91 0.910 - - - - - 1.000 - -
10. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.872 0.910 - 0.962 - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
11. pax4 ENSDARG00000021336 29 1.864 - 1.000 - - 0.864 - - - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
12. arih1l ENSDARG00000036870, ENSDARG00000112965 82 1.843 - 1.000 - - 0.843 - - - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
13. CR383676.3_2 CR383676.3_2 9 1.828 - 0.917 0.911 - - - - - -
14. slc52a2 ENSDARG00000102035 57 1.806 - - - - 0.871 - 0.935 - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
15. si:ch211-150j10.4 ENSDARG00000079336 23 1.799 0.910 - - - 0.889 - - - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
16. slc43a3a ENSDARG00000059682 27 1.771 - 1.000 0.771 - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
17. dhcr24 ENSDARG00000013236 61 1.732 - 1.000 - - 0.732 - - - - 24-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-041212-73]
18. pcdh8 ENSDARG00000006467 317 1.725 - 1.000 - - - - 0.725 - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
19. si:ch211-259i2.2 si:ch211-259i2.2 45 1.716 0.716 - 1.000 - - - - - -
20. si:ch211-80h18.1 ENSDARG00000078522 1941 1.715 0.910 - - - - - 0.805 - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
21. DUSP13_1 DUSP13_1 425 1.711 0.910 - 0.801 - - - - - -
22. aven ENSDARG00000002894 49 1.71 0.910 - - - - - 0.800 - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
23. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1.71 0.910 - - - - - 0.800 - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
24. si:ch211-162i8.2 ENSDARG00000096041 4 1.703 - 1.000 - 0.703 - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
25. CR788231.1 CR788231.1 61 1.698 - - - - 0.898 - 0.800 - -
26. CDH12 CDH12 44 1.695 0.948 0.747 - - - - - - -
27. agxt2 ENSDARG00000100709 799 1.681 - - - - 0.737 - 0.944 - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
28. fgf20b ENSDARG00000086070 13 1.679 - - 0.973 - - - 0.706 - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
29. si:dkey-97l20.5 si:dkey-97l20.5 33 1.669 0.948 - - - - - 0.721 - -
30. tnmd ENSDARG00000052615 42 1.661 - - 0.911 - - - 0.750 - - tenomodulin [Source:ZFIN;Acc:ZDB-GENE-080220-31]
31. nphs1 ENSDARG00000060758 5 1.65 - - 0.850 - - - 0.800 - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
32. CABZ01072557.1 CABZ01072557.1 9 1.639 0.910 0.729 - - - - - - -
33. b3gntl1 ENSDARG00000043431 50 1.625 0.910 - - - 0.715 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
34. ccdc169 ENSDARG00000089570 101 1.62 - - - - 0.758 - 0.862 - - coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
35. CU183952.1 CU183952.1 32 1.616 0.910 - - - - - 0.706 - -
36. PPP1R16B ENSDARG00000079860 390 1.615 0.738 - - - - - 0.877 - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
37. nanos3 ENSDARG00000068255 319 1.573 - 0.747 - - - - 0.826 - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
38. fbxl18 ENSDARG00000007443, ENSDARG00000113264 178 1.554 0.789 - - - 0.765 - - - - F-box and leucine-rich repeat protein 18 [Source:ZFIN;Acc:ZDB-GENE-050913-65]
39. TMEM121_1 TMEM121_1 22 1.545 - - 0.780 - - - 0.765 - -
40. cep76 ENSDARG00000058319 143 1.54 - 0.809 - - 0.731 - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
41. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.518 - - - - 0.731 - 0.787 - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
42. zgc:162184 ENSDARG00000077217 47 1.509 - 0.729 - - 0.780 - - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
43. rhof ENSDARG00000054389, ENSDARG00000111798 15 1.509 - - 0.709 - - - 0.800 - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
44. si:dkey-45k15.1 ENSDARG00000061714 32 1.503 - - - 0.703 - - 0.800 - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
45. zgc:173837 ENSDARG00000076949 24 1 - 1.000 - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
46. sebox ENSDARG00000042526 2 1 - 1.000 - - - - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
47. zgc:175280 ENSDARG00000099111 71 1 - 1.000 - - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
48. nobox 5 1 - 1.000 - - - - - - - NOBOX oogenesis homeobox
49. C21H11orf82 C21H11orf82 50 1 - 1.000 - - - - - - -
50. BX000701.3 BX000701.3 4 1 - 1.000 - - - - - - -
51. CU655961.3 ENSDARG00000106724 14 1 - 1.000 - - - - - - -
52. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1 - 1.000 - - - - - - - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
53. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - 1.000 - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
54. SUSD4 ENSDARG00000026335 195 1 - 1.000 - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
55. si:dkey-220k22.3 ENSDARG00000094693 166 1 - 1.000 - - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
56. IQCK ENSDARG00000076831, ENSDARG00000112508 6 1 - 1.000 - - - - - - - IQ motif containing K [Source:ZFIN;Acc:ZDB-GENE-081022-109]
57. npffr2.1 npffr2.1 60 1 - 1.000 - - - - - - -
58. CR942805.3 CR942805.3 7 1 - - 1.000 - - - - - -
59. CU693369.1 CU693369.1 2 1 - 1.000 - - - - - - -
60. CABZ01081752.1 ENSDARG00000099245 84 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]
61. si:dkey-65b12.12 ENSDARG00000094458 26 1 - 1.000 - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
62. map3k19 ENSDARG00000094272 59 1 - - 1.000 - - - - - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
63. olfcg4 ENSDARG00000099773 1 1 - 1.000 - - - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
64. CT027674.1 ENSDARG00000106606 11 1 - 1.000 - - - - - - - probable E3 ubiquitin-protein ligase TRIML1 [Source:NCBI gene;Acc:108191962]
65. CR933820.2 CR933820.2 152 1 - 1.000 - - - - - - -
66. trhra ENSDARG00000076546 3 1 - - 1.000 - - - - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
67. si:dkeyp-20e4.9 si:dkeyp-20e4.9 3 1 - - 1.000 - - - - - -
68. sphkap ENSDARG00000017429 60 1 - 1.000 - - - - - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
69. CR936975.1 ENSDARG00000096862 22 1 - 1.000 - - - - - - -
70. bbs10 ENSDARG00000069515, ENSDARG00000110925 36 1 - 1.000 - - - - - - - Bardet-Biedl syndrome 10 [Source:ZFIN;Acc:ZDB-GENE-060503-355]
71. jam3a ENSDARG00000114589 630 1 - 1.000 - - - - - - - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
72. AL844567.1_1 AL844567.1_1 34 1 - 1.000 - - - - - - -
73. trim35-3_1 ENSDARG00000052255 6 1 - 1.000 - - - - - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
74. CABZ01060813.1 CABZ01060813.1 12 1 - 1.000 - - - - - - -
75. C24H8orf34 C24H8orf34 1 1 - 1.000 - - - - - - -
76. edaradd ENSDARG00000062289 66 1 - 1.000 - - - - - - - EDAR-associated death domain [Source:ZFIN;Acc:ZDB-GENE-050114-5]
77. CU694319.1 CU694319.1 72 1 - 1.000 - - - - - - -
78. zgc:172079 ENSDARG00000056762, ENSDARG00000077644, ENSDARG00000105644 102 1 - 1.000 - - - - - - - zgc:172079 [Source:ZFIN;Acc:ZDB-GENE-080204-103]
79. CU459084.1 CU459084.1 4 1 - - 1.000 - - - - - -
80. zgc:193690 34 1 - 1.000 - - - - - - - zgc:193690
81. si:dkeyp-41f9.4 ENSDARG00000092269 3 1 - 1.000 - - - - - - - si:dkeyp-41f9.4 [Source:ZFIN;Acc:ZDB-GENE-091204-320]
82. CR848836.6 CR848836.6 93 1 - 1.000 - - - - - - -
83. si:dkeyp-35e5.9 ENSDARG00000103527 24 1 - 1.000 - - - - - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
84. si:ch211-155e24.5 si:ch211-155e24.5 2 1 - 1.000 - - - - - - -
85. TMEM63C ENSDARG00000004158, ENSDARG00000112348 21 1 - 1.000 - - - - - - - transmembrane protein 63C [Source:ZFIN;Acc:ZDB-GENE-120928-2]
86. elfn1b ENSDARG00000074372 25 1 - 1.000 - - - - - - - extracellular leucine-rich repeat and fibronectin type III domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080327-21]
87. gaa ENSDARG00000090714 19 1 - 1.000 - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
88. CABZ01117437.1 CABZ01117437.1 11 1 - 1.000 - - - - - - -
89. gdpd3b ENSDARG00000006944 19 1 - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
90. clcn1a ENSDARG00000062084 120 1 - 1.000 - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
91. si:dkey-113d16.9 si:dkey-113d16.9 345 1 - 1.000 - - - - - - -
92. CU459094.1 ENSDARG00000110517 17 1 - 1.000 - - - - - - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
93. chia.3 ENSDARG00000009612 14 1 - 1.000 - - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
94. DHX32 DHX32 181 1 - 1.000 - - - - - - -
95. CR854963.2 ENSDARG00000114235 82 1 - 1.000 - - - - - - -
96. bnip1a ENSDARG00000078259 2 1 - - 1.000 - - - - - - BCL2 interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-081107-44]
97. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - 1.000 - - - - - - -
98. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - 1.000 - - - - - - -
99. FP102786.1 ENSDARG00000090551 3 1 - 1.000 - - - - - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101882698]
100. KBTBD11 ENSDARG00000104958 8 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]

There are 1019 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA