Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATRIP

Gene Name Gene ID Reads Annotation
ATRIP ENSGALG00000004670 3647 ATR interacting protein [Source:NCBI gene;Acc:415949]











Genes with expression patterns similar to ATRIP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATRIP ENSGALG00000004670 3647 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATR interacting protein [Source:NCBI gene;Acc:415949]
2. SCCPDH ENSGALG00000010641 8624 2.39 - - 0.728 - - - 0.766 0.896 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
3. SMAD1 ENSGALG00000009977 3540 1.816 - - 0.844 - - - - 0.972 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
4. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.795 - - 0.827 - - - - 0.968 - -
5. C6ORF162 C6ORF162 4217 1.727 - - 0.760 - - - - 0.967 - -
6. THAP5 ENSGALG00000009494 6540 1.713 - - 0.752 - - - - 0.961 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
7. DNTTIP1 ENSGALG00000003575 4687 1.712 - - 0.746 - - - - 0.966 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
8. MLX ENSGALG00000003199 5286 1.706 - - - - - - 0.745 0.961 - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
9. LRRFIP2 ENSGALG00000033102 8250 1.692 - - - - - - 0.735 0.957 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
10. KLHL13 KLHL13 2712 1.688 - - - - - - - 0.967 0.721 -
11. CZH9ORF80 CZH9ORF80 12760 1.682 - - - - - - 0.756 0.926 - -
12. SMU1 ENSGALG00000002014 8136 1.675 - - - - - - 0.712 0.963 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
13. RAD50 ENSGALG00000006794 4308 1.669 - - 0.721 - - - - 0.948 - - RAD50 double strand break repair protein, transcript variant X4
14. HNRNPK ENSGALG00000012591 1109 1.659 - - - - - - - 0.949 - 0.710 heterogeneous nuclear ribonucleoprotein K, transcript variant X8
15. SLIT2 ENSGALG00000041121 3223 1.636 - - 0.723 - - - - 0.913 - - slit guidance ligand 2 [Source:NCBI gene;Acc:373967]
16. AKAP10 ENSGALG00000004679 103 1.585 - - 0.844 - - - - - - 0.741 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
17. ASH2L ENSGALG00000003233 4814 1.584 - - 0.851 - - - 0.733 - - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
18. RAD54L2 ENSGALG00000003243 187 1.581 - - 0.848 - - - - - - 0.733 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
19. ZCCHC8 ENSGALG00000004486 3201 1.554 - - 0.823 - - - - - - 0.731 zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
20. CHORDC1 ENSGALG00000035461 2439 1.548 - - 0.764 - - - 0.784 - - - cysteine and histidine rich domain containing 1 [Source:NCBI gene;Acc:419009]
21. TIMMDC1 ENSGALG00000024480 9337 1.527 - - 0.803 - - - 0.724 - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
22. UQCRH ENSGALG00000017380 55734 1.525 - - - - - - 0.746 0.779 - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
23. PDIA5 ENSGALG00000011689 6913 1.519 - - 0.813 - - - 0.706 - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
24. UTP6 ENSGALG00000003260 4909 1.516 - - 0.805 - - - 0.711 - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
25. METTL23 ENSGALG00000001790 7906 1.499 - - - - - - 0.709 0.790 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
26. C17orf75 ENSGALG00000003434 4262 1.494 - - 0.784 - - - - 0.710 - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
27. LGALS1 ENSGALG00000012420 13993 1.49 - - 0.781 - - - 0.709 - - - galectin 1 [Source:NCBI gene;Acc:396491]
28. BNIP3L ENSGALG00000043405 10316 1.484 - - 0.765 - - - 0.719 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
29. MARC1 ENSGALG00000009453 5675 1.468 - - 0.762 - - - 0.706 - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
30. PDCD6 ENSGALG00000013400 7611 1.459 - - 0.738 - - - 0.721 - - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
31. STRBP ENSGALG00000029927 3516 1.448 - - 0.728 - - - 0.720 - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
32. DARS2 ENSGALG00000023749 2386 1.435 - - 0.717 - - - - - - 0.718 aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
33. ATG5 ENSGALG00000015387 7752 1.431 - - 0.713 - - - 0.718 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
34. PLEKHB2 ENSGALG00000002169 3832 1.427 - - 0.709 - - - 0.718 - - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
35. AHCTF1 ENSGALG00000010630 4809 1.427 - - 0.701 - - - 0.726 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
36. ARHGAP32 ENSGALG00000043511 7916 0.98 - - - - - - - 0.980 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
37. B4GALT3 ENSGALG00000022891 2825 0.977 - - - - - - - 0.977 - - beta-1,4-galactosyltransferase 3
38. TDRD3 ENSGALG00000016936 3412 0.976 - - - - - - - 0.976 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
39. RIPK1 ENSGALG00000012827 3405 0.976 - - - - - - - 0.976 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
40. SMPD4 ENSGALG00000006455 2270 0.974 - - - - - - - 0.974 - - sphingomyelin phosphodiesterase 4, transcript variant X1
41. YOD1 ENSGALG00000037597 2989 0.974 - - - - - - - 0.974 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
42. NOL6 ENSGALG00000030730 7191 0.973 - - - - - - - 0.973 - - nucleolar protein 6
43. SRFBP1 ENSGALG00000005316 6826 0.972 - - - - - - - 0.972 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
44. PRPSAP2 ENSGALG00000005064 5549 0.972 - - - - - - - 0.972 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
45. PALD1 ENSGALG00000004465 3553 0.971 - - - - - - - 0.971 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
46. SYAP1 ENSGALG00000016548 3347 0.971 - - - - - - - 0.971 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
47. HEATR6 ENSGALG00000005516 3347 0.971 - - - - - - - 0.971 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
48. SNX3 ENSGALG00000015304 1631 0.97 - - - - - - - 0.970 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
49. LTN1 ENSGALG00000015804 3784 0.97 - - - - - - - 0.970 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
50. AK1 ENSGALG00000029150 5935 0.969 - - - - - - - 0.969 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
51. UBXN2B ENSGALG00000030585 2177 0.969 - - - - - - - 0.969 - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
52. SPRYD7 ENSGALG00000017010 1910 0.968 - - - - - - - 0.968 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
53. SKIV2L2 ENSGALG00000014709 2926 0.968 - - - - - - - 0.968 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
54. C4H4ORF41 C4H4ORF41 1520 0.968 - - - - - - - 0.968 - -
55. GATAD2A ENSGALG00000042900 6337 0.968 - - - - - - - 0.968 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
56. AEN ENSGALG00000044204 2633 0.967 - - - - - - - 0.967 - - apoptosis enhancing nuclease, transcript variant X1
57. GID8 ENSGALG00000005700 3992 0.967 - - - - - - - 0.967 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
58. CACTIN ENSGALG00000024391 1408 0.967 - - - - - - - 0.967 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
59. ARL1 ENSGALG00000011651 3230 0.966 - - - - - - - 0.966 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
60. PLPPR1 ENSGALG00000015542 3179 0.966 - - - - - - - 0.966 - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
61. MEIS1 ENSGALG00000041626 3865 0.966 - - - - - - - 0.966 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
62. gga-mir-1723 ENSGALG00000025386 6662 0.965 - - - - - - - 0.965 - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
63. C2CD5 ENSGALG00000013210 3060 0.965 - - - - - - - 0.965 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
64. ARNT ENSGALG00000000751 3495 0.965 - - - - - - - 0.965 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
65. LAMA4 ENSGALG00000015001 993 0.964 - - - - - - - 0.964 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
66. SEC24B ENSGALG00000035482 3430 0.964 - - - - - - - 0.964 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
67. NPB NPB 8056 0.963 - - - - - - - 0.963 - -
68. SMAD2W ENSGALG00000014184 1773 0.963 - - - - - - - 0.963 - - SMAD family member 2-W, transcript variant X3
69. TMEM237 ENSGALG00000008381 1317 0.963 - - - - - - - 0.963 - - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
70. LIN28A ENSGALG00000036022 542 0.963 - - - - - - - 0.963 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
71. NAP1L4 ENSGALG00000006446 10868 0.962 - - - - - - - 0.962 - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
72. PSD2 ENSGALG00000030836 236 0.962 - - - - - - - 0.962 - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
73. ARRDC2 ENSGALG00000003527 1797 0.962 - - - - - - - 0.962 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
74. ARID1B ENSGALG00000013683 3397 0.961 - - - - - - - 0.961 - - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
75. ILKAP ENSGALG00000006253 7388 0.961 - - - - - - - 0.961 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
76. FAAH ENSGALG00000010433 3309 0.96 - - - - - - - 0.960 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
77. PLEKHA3 ENSGALG00000009135 1700 0.958 - - - - - - - 0.958 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
78. DENND1A ENSGALG00000001157 503 0.957 - - - - - - - 0.957 - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
79. RERG ENSGALG00000028186 1124 0.957 - - - - - - - 0.957 - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
80. BLZF1 ENSGALG00000015225 3594 0.957 - - - - - - - 0.957 - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
81. PIK3R3 ENSGALG00000010335 374 0.956 - - - - - - - 0.956 - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
82. ETAA1 ENSGALG00000027922 1684 0.956 - - - - - - - 0.956 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
83. TMEM47 ENSGALG00000027198 3619 0.956 - - - - - - - 0.956 - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
84. C1orf123 ENSGALG00000026516 3227 0.956 - - - - - - - 0.956 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
85. TMEM245 ENSGALG00000013138 501 0.956 - - - - - - - 0.956 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
86. HTRA1 ENSGALG00000041140 1750 0.956 - - - - - - - 0.956 - - HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
87. PCP4 ENSGALG00000022819 880 0.956 - - - - - - - 0.956 - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
88. C11H19ORF12 C11H19ORF12 5149 0.956 - - - - - - - 0.956 - -
89. SEMA5B ENSGALG00000011686 4184 0.956 - - - - - - - 0.956 - - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
90. MYO3A ENSGALG00000007647 643 0.955 - - - - - - - 0.955 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
91. THBS4 ENSGALG00000014804 4228 0.955 - - - - - - - 0.955 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
92. ARHGEF12 ENSGALG00000006663 1369 0.955 - - - - - - - 0.955 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
93. MMP16 ENSGALG00000032031 827 0.955 - - - - - - - 0.955 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
94. LDLRAP1 ENSGALG00000001051 1657 0.954 - - - - - - - 0.954 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
95. ZUFSP 549 0.954 - - - - - - - 0.954 - - zinc finger with UFM1 specific peptidase domain
96. LEMD2 ENSGALG00000002870 2803 0.954 - - - - - - - 0.954 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
97. PTN ENSGALG00000040493 864 0.954 - - - - - - - 0.954 - - pleiotrophin [Source:NCBI gene;Acc:418125]
98. HSDL2 ENSGALG00000015663 8966 0.954 - - - - - - - 0.954 - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
99. C14orf105 C14orf105 135 0.953 - - - - - - - 0.953 - -
100. gga-mir-6683 ENSGALG00000026767 5682 0.953 - - - - - - - 0.953 - - gga-mir-6683 [Source:miRBase;Acc:MI0022504]

There are 659 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA