Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATR

Gene Name Gene ID Reads Annotation
ATR ENSGALG00000002663 4626 ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]











Genes with expression patterns similar to ATR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATR ENSGALG00000002663 4626 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
2. SF3B3 ENSGALG00000002531 19397 2.283 - - - 0.735 - - 0.792 0.756 - - splicing factor 3b subunit 3, transcript variant X2
3. ENSGALG00000007514 ENSGALG00000007514 4866 2.22 - - 0.703 0.790 - - - 0.727 - -
4. VPS13B 2293 1.644 - - - 0.827 - - - - 0.817 - vacuolar protein sorting 13 homolog B
5. NCOA3 ENSGALG00000004570 243 1.629 - - - 0.792 - - - - 0.837 - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
6. ENSGALG00000012451 ENSGALG00000012451 7912 1.628 - - - - - - - 0.775 0.853 -
7. DPY30 ENSGALG00000010621 6818 1.588 - - - 0.815 - - - 0.773 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
8. TM4SF18 4553 1.584 - - - - - - 0.833 0.751 - - transmembrane 4 L six family member 18, transcript variant X2
9. BAG5 ENSGALG00000031062 4498 1.575 - - - 0.798 - - - 0.777 - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
10. PAXIP1 ENSGALG00000036064 3120 1.575 - - - 0.818 - - 0.757 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
11. GLRX3 ENSGALG00000010464 22578 1.575 - - - 0.814 - - 0.761 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
12. CHRAC1 ENSGALG00000040823 5695 1.566 - - - - - - 0.812 0.754 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
13. CACYBP ENSGALG00000004554 7320 1.564 - - - 0.783 - - - 0.781 - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
14. MRPS30 ENSGALG00000014874 3416 1.562 - - - 0.795 - - 0.767 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
15. STRN3 ENSGALG00000040464 9045 1.562 - - - - - - 0.721 0.841 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
16. ODZ3 ODZ3 2213 1.555 - - - 0.757 - - - 0.798 - -
17. AHCTF1 ENSGALG00000010630 4809 1.555 - - - 0.781 - - 0.774 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
18. RAB33B ENSGALG00000009790 2340 1.55 - - - 0.793 - - - 0.757 - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
19. AKT1 ENSGALG00000011620 4089 1.547 - - - 0.773 - - - 0.774 - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
20. SNX7 ENSGALG00000005478 4736 1.545 - - - - - - 0.799 0.746 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
21. PFKL ENSGALG00000006543 4361 1.543 - - - 0.783 - - - 0.760 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
22. SSR2 ENSGALG00000000764 32190 1.54 - - - 0.758 - - - 0.782 - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
23. ATP6AP1 ENSGALG00000008836 4343 1.536 - - - - - - 0.717 0.819 - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
24. MSH6 ENSGALG00000008957 6396 1.536 - - - 0.762 - - - 0.774 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
25. PANK1 ENSGALG00000006431 2910 1.534 - - - 0.806 - - - 0.728 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
26. CNI CNI 18453 1.534 - - - - - - 0.701 0.833 - -
27. KIAA1143 ENSGALG00000035952 6735 1.532 - - - 0.782 - - - 0.750 - - KIAA1143 [Source:NCBI gene;Acc:420709]
28. LARS ENSGALG00000007494 13966 1.529 - - - 0.755 - - - 0.774 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
29. ADI1 ENSGALG00000025796 8636 1.525 - - - - - - 0.750 0.775 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
30. HINT3 ENSGALG00000044342 5674 1.515 - - - 0.792 - - - 0.723 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
31. BLMH ENSGALG00000004259 36907 1.512 - - - - - - 0.735 0.777 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
32. RBFOX1 ENSGALG00000034325 2133 1.511 - - - 0.764 - - 0.747 - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
33. NMT1 ENSGALG00000000857 5770 1.509 - - - - - - 0.723 0.786 - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
34. HEATR3 ENSGALG00000041613 2704 1.508 - - - 0.738 - - - 0.770 - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
35. HERC2 ENSGALG00000016739 9900 1.503 - - - 0.733 - - 0.770 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
36. INCENP ENSGALG00000007537 16617 1.502 - - - - - - 0.765 0.737 - - inner centromere protein [Source:NCBI gene;Acc:396270]
37. CHM ENSGALG00000006906 4953 1.501 - - - 0.764 - - - 0.737 - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
38. IFRD1 ENSGALG00000009448 8865 1.499 - - - 0.719 - - 0.780 - - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
39. TJP2 ENSGALG00000015109 4002 1.496 - - - 0.757 - - - 0.739 - - tight junction protein 2 [Source:NCBI gene;Acc:395751]
40. TTC14 ENSGALG00000008889 3828 1.494 - - - - - - 0.705 0.789 - - tetratricopeptide repeat domain 14 [Source:NCBI gene;Acc:424970]
41. GNAI2 ENSGALG00000035645 9535 1.491 - - - - - - 0.764 0.727 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
42. PPFIA1 ENSGALG00000035774 5258 1.49 - - - 0.777 - - - 0.713 - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
43. ZMPSTE24 ENSGALG00000000855 5144 1.488 - - - - - - 0.773 0.715 - - zinc metallopeptidase STE24 [Source:HGNC Symbol;Acc:HGNC:12877]
44. RAD23B ENSGALG00000015540 10828 1.48 - - - - - - 0.739 - 0.741 - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
45. MED7 ENSGALG00000003870 4244 1.478 - - - 0.720 - - - - 0.758 - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
46. ACTR8 ENSGALG00000005385 3647 1.477 - - - - - - 0.721 0.756 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
47. CDC42BPB ENSGALG00000011432 8220 1.475 - - - 0.767 - - - 0.708 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
48. CDK8 ENSGALG00000017104 5956 1.463 - - - 0.752 - - 0.711 - - - cyclin dependent kinase 8, transcript variant X4
49. MRPL55 5995 1.451 - - - 0.731 - - - 0.720 - - mitochondrial ribosomal protein L55
50. SH3BGRL ENSGALG00000007128 18708 1.45 - - - - - - - 0.745 0.705 - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
51. NUDT4 ENSGALG00000011285 2998 1.447 - - - 0.729 - - 0.718 - - - nudix hydrolase 4, transcript variant X5
52. DLG5 ENSGALG00000043018 2357 1.446 - - - - - - 0.713 0.733 - - discs large MAGUK scaffold protein 5 [Source:HGNC Symbol;Acc:HGNC:2904]
53. ALKBH1 ENSGALG00000010485 1828 1.442 - - - - - - 0.729 0.713 - - alkB homolog 1, histone H2A dioxygenase [Source:NCBI gene;Acc:428898]
54. ST5 6869 1.44 - - - 0.735 - - 0.705 - - - suppression of tumorigenicity 5, transcript variant X1
55. N-RAS N-RAS 5787 1.44 - - - - - - 0.701 0.739 - -
56. TANC1 ENSGALG00000012570 4196 1.436 - - - - - - 0.706 0.730 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
57. SHMT1 ENSGALG00000005046 1430 1.426 - - - 0.721 - - 0.705 - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
58. AGFG1 ENSGALG00000003052 4766 1.424 - - - - - - 0.719 - 0.705 - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
59. VPS35 ENSGALG00000004375 8059 1.421 - - - 0.713 - - 0.708 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
60. CCDC47 ENSGALG00000000564 6584 1.418 - - - 0.700 - - - 0.718 - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
61. PHF14 ENSGALG00000038041 13687 1.413 - - - 0.702 - - - 0.711 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
62. TMEM194B TMEM194B 3815 1.408 - - - - - - 0.700 0.708 - -
63. BPNT1 ENSGALG00000009576 7445 0.88 - - - - - - - 0.880 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
64. TDP2 ENSGALG00000013637 6595 0.876 - - - - - - - 0.876 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
65. NUDT7 ENSGALG00000034395 7396 0.856 - - - - - - - 0.856 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
66. HSCB ENSGALG00000005706 12953 0.851 - - - - - - - 0.851 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
67. C1H11ORF73 C1H11ORF73 10071 0.849 - - - - - - - 0.849 - -
68. PTPMT1 ENSGALG00000008091 6160 0.844 - - - - - - - 0.844 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
69. BRMS1L ENSGALG00000010093 4964 0.844 - - - - - - 0.844 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
70. TIMM22 ENSGALG00000004383 7619 0.843 - - - - - - 0.843 - - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
71. CERK ENSGALG00000019397 4511 0.84 - - - - - - 0.840 - - - ceramide kinase [Source:NCBI gene;Acc:425523]
72. FAM18B1 ENSGALG00000001335 5177 0.838 - - - - - - - 0.838 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
73. RUVBL1 ENSGALG00000005931 9379 0.837 - - - - - - 0.837 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
74. MFSD2A ENSGALG00000003879 5455 0.837 - - - 0.837 - - - - - - major facilitator superfamily domain containing 2A [Source:HGNC Symbol;Acc:HGNC:25897]
75. ERLIN2 ENSGALG00000003092 18251 0.836 - - - - - - - 0.836 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
76. SNX27 ENSGALG00000040687 3221 0.835 - - - 0.835 - - - - - - sorting nexin family member 27 [Source:NCBI gene;Acc:425666]
77. CASK ENSGALG00000042400 8485 0.834 - - - - - - 0.834 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
78. SPEN ENSGALG00000036932 9688 0.833 - - - - - - 0.833 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
79. RNPC3 ENSGALG00000005162 269 0.832 - - - 0.832 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
80. PEX10 ENSGALG00000001223 5704 0.831 - - - - - - - 0.831 - - peroxisomal biogenesis factor 10 [Source:NCBI gene;Acc:419396]
81. GTF3C4 ENSGALG00000031016 1221 0.83 - - - 0.830 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
82. GFM1 ENSGALG00000009634 7213 0.829 - - - - - - - 0.829 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
83. SASS6 ENSGALG00000005302 4029 0.828 - - - - - - - 0.828 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
84. CHCHD3 ENSGALG00000006489 18592 0.828 - - - 0.828 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
85. MSMO1 ENSGALG00000009560 6928 0.828 - - - - - - - 0.828 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
86. ATG3 ENSGALG00000015204 11277 0.827 - - - - - - 0.827 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
87. WDR96 WDR96 255 0.827 - - - 0.827 - - - - - -
88. NEK6 ENSGALG00000001118 20333 0.827 - - - - - - 0.827 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
89. RFC1 ENSGALG00000014298 6516 0.827 - - - - - - - 0.827 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
90. EMC3 ENSGALG00000003738 10363 0.827 - - - - - - - 0.827 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
91. MLH3 ENSGALG00000010304 231 0.826 - - - 0.826 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
92. GLRX ENSGALG00000027483 217 0.826 - - - - - - - - 0.826 - glutaredoxin [Source:NCBI gene;Acc:396069]
93. CDC34 ENSGALG00000024332 4562 0.825 - - - - - - 0.825 - - - cell division cycle 34 [Source:HGNC Symbol;Acc:HGNC:1734]
94. GPATCH2 ENSGALG00000009627 4061 0.825 - - - - - - - - 0.825 - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
95. ZBTB17 ENSGALG00000035352 280 0.825 - - - 0.825 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
96. DAD1 ENSGALG00000035626 32604 0.825 - - - - - - - 0.825 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
97. VWDE ENSGALG00000042443 160 0.825 - - - 0.825 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
98. TMOD1 ENSGALG00000002125 933 0.825 - - - 0.825 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
99. TRIM62 ENSGALG00000028437 5124 0.824 - - - 0.824 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
100. ADCY9 ENSGALG00000007779 766 0.824 - - - 0.824 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]

There are 763 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA