Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ATPAF1

Gene Name Gene ID Reads Annotation
ATPAF1 ENSGALG00000010444 3677 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]











Genes with expression patterns similar to ATPAF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATPAF1 ENSGALG00000010444 3677 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
2. RSL1D1 ENSGALG00000033690 13638 2.378 - - 0.767 - - - 0.779 0.832 - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
3. HMGN3 ENSGALG00000015880 30919 2.232 - - - - 0.764 - 0.721 0.747 - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
4. BRMS1L ENSGALG00000010093 4964 1.92 - - - - 0.948 - - 0.972 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
5. TMEM97 ENSGALG00000005702 2037 1.823 - - 0.846 - 0.977 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
6. UTP3 ENSGALG00000011553 8814 1.743 - - - - 0.942 - - - - 0.801 UTP3, small subunit processome component homolog (S. cerevisiae)
7. NMD3 ENSGALG00000009533 8726 1.739 - - - - - - - 0.981 - 0.758 NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
8. OGFOD3 ENSGALG00000001618 2438 1.73 - - - - 0.978 - - - - 0.752 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
9. DAPK3 ENSGALG00000037733 6215 1.716 - - 0.863 - 0.853 - - - - - death-associated protein kinase 3, transcript variant X2
10. NOVA1 ENSGALG00000009850 7584 1.711 - - 0.726 - - - - 0.985 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
11. KPNA1 ENSGALG00000014426 2724 1.707 - - - - - - 0.722 0.985 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
12. MDFIC ENSGALG00000026838 3881 1.706 - - 0.750 - 0.956 - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
13. GTF2H3 ENSGALG00000023682 9914 1.699 - - - - 0.972 - 0.727 - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
14. Sep-11 Sep-11 2005 1.689 - - 0.710 - 0.979 - - - - -
15. MAK16 ENSGALG00000001663 7455 1.689 - - 0.888 - - - 0.801 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
16. MAP2 ENSGALG00000002789 6597 1.685 - - 0.745 - - - - 0.940 - - microtubule associated protein 2, transcript variant X33
17. ZFPM2 ENSGALG00000040079 942 1.676 - - - - 0.866 - - - - 0.810 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
18. NDUFAF2 ENSGALG00000027564 7302 1.662 - - 0.768 - 0.894 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
19. PPP1CC ENSGALG00000004571 14748 1.661 - - - - - - 0.720 0.941 - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
20. IGF2BP2 ENSGALG00000033195 11421 1.654 - - - - 0.941 - 0.713 - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
21. ATP2B2 ENSGALG00000030908 584 1.644 - - 0.841 - - - - - - 0.803 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
22. GARNL3 ENSGALG00000000847 3423 1.644 - - 0.859 - - - - - - 0.785 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
23. DLX5 ENSGALG00000009129 1395 1.628 - - 0.853 - - - - - - 0.775 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
24. ZNF276 ENSGALG00000000513 2410 1.626 - - 0.822 - - - - - - 0.804 zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
25. BDH1_1 ENSGALG00000023601 6109 1.623 - - 0.713 - - - - 0.910 - - 3-hydroxybutyrate dehydrogenase, type 1
26. NUPL1 NUPL1 8197 1.62 - - - - 0.916 - 0.704 - - -
27. FBXL17 ENSGALG00000000276 2443 1.612 - - 0.807 - - - - - - 0.805 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
28. MCFD2 ENSGALG00000010017 8905 1.606 - - - - - - 0.779 - - 0.827 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
29. PCMTD2 ENSGALG00000005901 1833 1.6 - - 0.784 - - - - - - 0.816 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
30. GLRX5 ENSGALG00000011079 28943 1.599 - - - - 0.847 - - 0.752 - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
31. RASSF8 ENSGALG00000014041 850 1.593 - - 0.844 - - - - - - 0.749 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
32. TMED5 27507 1.592 - - 0.770 - - - - 0.822 - - transmembrane p24 trafficking protein 5
33. SECISBP2 ENSGALG00000010694 6990 1.579 - - 0.785 - - - 0.794 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
34. METTL6 ENSGALG00000040665 4467 1.572 - - 0.767 - - - - - - 0.805 methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
35. PDCD4 ENSGALG00000008700 574 1.566 - - 0.802 - - - - - - 0.764 programmed cell death 4 [Source:NCBI gene;Acc:374191]
36. CDK8 ENSGALG00000017104 5956 1.557 - - - - - - - 0.853 - 0.704 cyclin dependent kinase 8, transcript variant X4
37. SETD3 ENSGALG00000034802 4125 1.555 - - 0.758 - - - 0.797 - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
38. PHF2 ENSGALG00000039208 2003 1.55 - - 0.846 - - - - - - 0.704 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
39. RGP1 ENSGALG00000002394 5937 1.549 - - 0.730 - - - - - - 0.819 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
40. MAN1A1 ENSGALG00000014878 1061 1.542 - - 0.841 - - - - - - 0.701 mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
41. PELI1 ENSGALG00000008837 11561 1.54 - - 0.731 - 0.809 - - - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
42. CTNNBIP1 ENSGALG00000026306 8049 1.502 - - 0.796 - - - 0.706 - - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
43. CLN8 ENSGALG00000039606 4209 1.498 - - 0.772 - - - 0.726 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
44. gga-mir-6599 ENSGALG00000028121 4746 1.495 - - 0.770 - - - - - - 0.725 gga-mir-6599 [Source:miRBase;Acc:MI0022544]
45. WDR51B WDR51B 5757 1.459 - - 0.730 - - - 0.729 - - -
46. NASP ENSGALG00000010255 28423 1.423 - - - - - - 0.709 - - 0.714 nuclear autoantigenic sperm protein, transcript variant X3
47. MYO9B ENSGALG00000003717 746 1.421 - - 0.712 - - - - - - 0.709 myosin IXB [Source:NCBI gene;Acc:420135]
48. MED17 ENSGALG00000017218 5821 1.42 - - - - - - 0.708 - - 0.712 mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
49. ERBB2IP ERBB2IP 5800 1.416 - - 0.709 - - - 0.707 - - -
50. PRPSAP2 ENSGALG00000005064 5549 1.414 - - 0.709 - - - 0.705 - - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
51. TRMT10A ENSGALG00000012264 2467 0.997 - - - - - - - 0.997 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
52. UPF3B ENSGALG00000008618 12350 0.995 - - - - - - - 0.995 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
53. ARPP21 ENSGALG00000043240 2403 0.99 - - - - 0.990 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
54. PRKAR2A ENSGALG00000007023 909 0.988 - - - - - - - 0.988 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
55. C26H6ORF106 C26H6ORF106 2168 0.988 - - - - - - - 0.988 - -
56. SLC9A3R2 ENSGALG00000005608 4220 0.988 - - - - 0.988 - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
57. WDR91 ENSGALG00000011724 5787 0.988 - - - - - - - 0.988 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
58. MRPS31 ENSGALG00000017033 9287 0.988 - - - - - - - 0.988 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
59. TNPO3 ENSGALG00000039420 5178 0.988 - - - - - - - 0.988 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
60. POLR1B ENSGALG00000032273 3845 0.988 - - - - 0.988 - - - - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
61. POLR3H ENSGALG00000011947 2899 0.988 - - - - - - - 0.988 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
62. KCNK5 ENSGALG00000034077 3233 0.988 - - - - - - - 0.988 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
63. TNFRSF11B ENSGALG00000043167 911 0.987 - - - - - - - 0.987 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
64. CCDC167 ENSGALG00000010151 3567 0.987 - - - - - - - 0.987 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
65. TCTEX1D2 ENSGALG00000027722 2201 0.987 - - - - - - - 0.987 - - Tctex1 domain containing 2
66. GOT2 ENSGALG00000002321 4961 0.987 - - - - - - - 0.987 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
67. EPM2A ENSGALG00000012275 872 0.987 - - - - - - - 0.987 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
68. COL14A1 ENSGALG00000037675 2652 0.987 - - - - - - - 0.987 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
69. LYRM4 ENSGALG00000027339 2917 0.987 - - - - - - - 0.987 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
70. CLIP1 ENSGALG00000004467 1058 0.987 - - - - - - - 0.987 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
71. B9D1 ENSGALG00000005096 760 0.987 - - - - - - - 0.987 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
72. EEFSEC ENSGALG00000038684 298 0.987 - - - - - - - 0.987 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
73. TLE3 ENSGALG00000008120 2655 0.986 - - - - - - - 0.986 - - transducin like enhancer of split 3, transcript variant X10
74. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.986 - - - - - - - 0.986 - -
75. ELMO2 ENSGALG00000007246 4569 0.986 - - - - - - - 0.986 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
76. MRPS7 ENSGALG00000007999 5445 0.986 - - - - - - - 0.986 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
77. GSTO1 ENSGALG00000008409 7561 0.986 - - - - - - - 0.986 - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
78. GNG10 ENSGALG00000015683 6905 0.986 - - - - - - - 0.986 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
79. PM20D1 ENSGALG00000000724 2108 0.986 - - - - - - - 0.986 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
80. ARFGAP3 ENSGALG00000014140 4612 0.985 - - - - - - - 0.985 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
81. RAB24 ENSGALG00000002984 6264 0.984 - - - - - - - 0.984 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
82. OTUD4 ENSGALG00000009968 3919 0.984 - - - - - - - 0.984 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
83. CAPZA1 ENSGALG00000001547 24242 0.984 - - - - - - - 0.984 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
84. BMP5 ENSGALG00000016293 2119 0.983 - - - - - - - 0.983 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
85. CEP192 ENSGALG00000035625 2270 0.983 - - - - - - - 0.983 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
86. ROR2 ENSGALG00000015208 1323 0.983 - - - - 0.983 - - - - - receptor tyrosine kinase like orphan receptor 2 [Source:NCBI gene;Acc:769516]
87. ZNF318 ENSGALG00000034040 1758 0.983 - - - - 0.983 - - - - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
88. MFF ENSGALG00000003079 5289 0.983 - - - - - - - 0.983 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
89. HMGN1 ENSGALG00000016067 17375 0.983 - - - - 0.983 - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
90. DRD2 ENSGALG00000007794 399 0.982 - - - - 0.982 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
91. RAB23 ENSGALG00000016279 597 0.982 - - - - 0.982 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
92. FANCM ENSGALG00000031182 1030 0.982 - - - - 0.982 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
93. ERICH1 ENSGALG00000031021 1495 0.982 - - - - 0.982 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
94. LOC770492 ENSGALG00000027778 695 0.982 - - - - 0.982 - - - - - ras-related and estrogen-regulated growth inhibitor-like
95. AP1S3 ENSGALG00000005171 2981 0.981 - - - - 0.981 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
96. CALCA CALCA 682 0.981 - - - - 0.981 - - - - -
97. DAP3 ENSGALG00000019796 13278 0.981 - - - - 0.981 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
98. PRKCD ENSGALG00000002016 1476 0.981 - - - - 0.981 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
99. SGCE ENSGALG00000009670 3070 0.981 - - - - - - - 0.981 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
100. ADPGK ENSGALG00000001788 208 0.981 - - - - 0.981 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]

There are 813 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA