Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATP5MC1

Gene Name Gene ID Reads Annotation
ATP5MC1 ENSGALG00000001330 37766 ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]











Genes with expression patterns similar to ATP5MC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATP5MC1 ENSGALG00000001330 37766 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
2. DENR ENSGALG00000003795 30805 1.857 - - - - 0.862 - 0.995 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
3. CTU2 4818 1.824 - - - - - - 0.987 0.837 - - cytosolic thiouridylase subunit 2, transcript variant X3
4. POLR2E ENSGALG00000002591 26405 1.657 - - - - 0.854 - 0.803 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
5. MYBL2 ENSGALG00000003503 15875 1.579 - - - - 0.812 - - 0.767 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
6. LZIC ENSGALG00000002616 9052 1.572 - - - - 0.824 - 0.748 - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
7. CSNK2A1 ENSGALG00000006197 41409 1.541 - - - - 0.754 - - 0.787 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
8. POLR2D ENSGALG00000002057 14548 0.996 - - - - - - 0.996 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
9. PFDN4 ENSGALG00000007792 26514 0.995 - - - - - - 0.995 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
10. EIF3J ENSGALG00000008187 43570 0.994 - - - - - - 0.994 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
11. ENSGALG00000004773 ENSGALG00000004773 10418 0.993 - - - - - - 0.993 - - -
12. MOB3A ENSGALG00000031729 9690 0.993 - - - - - - 0.993 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
13. IMP4 ENSGALG00000029152 11669 0.993 - - - - - - 0.993 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
14. FBN3 ENSGALG00000037625 23313 0.991 - - - - - - 0.991 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
15. FAM103A1 17380 0.99 - - - - - - 0.990 - - - family with sequence similarity 103 member A1, transcript variant X2
16. M6PR ENSGALG00000031681 9442 0.99 - - - - - - 0.990 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
17. SMC2 ENSGALG00000015691 34013 0.99 - - - - - - 0.990 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
18. POLR1C ENSGALG00000010349 7059 0.99 - - - - - - 0.990 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
19. HOXD8 ENSGALG00000037272 4338 0.989 - - - - - - 0.989 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
20. MRPL32 ENSGALG00000037258 6861 0.988 - - - - - - 0.988 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
21. PTBP2 ENSGALG00000005552 3443 0.986 - - - - - - 0.986 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
22. EGFLAM ENSGALG00000003726 4588 0.986 - - - - - - 0.986 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
23. DYNLL2 ENSGALG00000005522 17107 0.986 - - - - - - 0.986 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
24. PRDX6 ENSGALG00000003053 17928 0.986 - - - - - - 0.986 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
25. ENSGALG00000014190 ENSGALG00000014190 5735 0.985 - - - - - - 0.985 - - -
26. TMEM97 ENSGALG00000005702 2037 0.985 - - - - - - 0.985 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
27. TMEM120B ENSGALG00000004254 2819 0.985 - - - - - - 0.985 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
28. CAND1 4541 0.985 - - - - - - 0.985 - - - cullin associated and neddylation dissociated 1
29. ABCC10 2213 0.985 - - - - - - 0.985 - - - ATP binding cassette subfamily C member 10, transcript variant X10
30. TMC1 ENSGALG00000015145 1180 0.984 - - - - - - 0.984 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
31. TMEM62 ENSGALG00000009260 1170 0.984 - - - - - - 0.984 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
32. BMP3 ENSGALG00000035052 3260 0.984 - - - - - - 0.984 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
33. DDX21 ENSGALG00000004144 13105 0.982 - - - - - - 0.982 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
34. PHGDH ENSGALG00000002988 6912 0.981 - - - - - - 0.981 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
35. MCM2 ENSGALG00000006037 13458 0.98 - - - - - - 0.980 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
36. ITGA1 ENSGALG00000014891 11378 0.978 - - - - - - 0.978 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
37. CHNTHL1 CHNTHL1 4976 0.972 - - - - - - 0.972 - - -
38. CALM_1 CALM_1 57812 0.965 - - - - - - 0.965 - - -
39. ALDH1A2 ENSGALG00000004270 49483 0.941 - - - - - - 0.941 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
40. UQCRFS1 ENSGALG00000025819 66637 0.931 - - - - - - 0.931 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
41. TAF15 ENSGALG00000002060 12320 0.925 - - - - - - - 0.925 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
42. ATP2A2 ENSGALG00000032287 12734 0.909 - - - - - - 0.909 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
43. SELT SELT 25524 0.905 - - - - 0.905 - - - - -
44. UBE2D3 ENSGALG00000012311 39831 0.889 - - - - 0.889 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
45. MINOS1 ENSGALG00000004039 37740 0.889 - - - - 0.889 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
46. RAD23B ENSGALG00000015540 10828 0.885 - - - - 0.885 - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
47. TM9SF3 ENSGALG00000005534 15290 0.885 - - - - 0.885 - - - - - transmembrane 9 superfamily member 3
48. COMMD2 ENSGALG00000028001 18981 0.88 - - - - 0.880 - - - - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
49. PSME3 ENSGALG00000002937 41148 0.88 - - - - 0.880 - - - - - proteasome activator subunit 3 [Source:NCBI gene;Acc:420017]
50. ENSGALG00000021694 ENSGALG00000021694 26011 0.88 - - - - - - - 0.880 - -
51. THRAP3 ENSGALG00000002144 21958 0.876 - - - - - - - 0.876 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
52. SEPHS1 ENSGALG00000014575 10701 0.875 - - - - 0.875 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
53. PRCC ENSGALG00000040696 9346 0.868 - - - - 0.868 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
54. KPNA2 ENSGALG00000003584 76058 0.867 - - - - 0.867 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
55. CENPP ENSGALG00000004687 6707 0.867 - - - - 0.867 - - - - - centromere protein P [Source:NCBI gene;Acc:415952]
56. MRPL21 ENSGALG00000004362 20796 0.861 - - - - 0.861 - - - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
57. ACTG1_1 ENSGALG00000001381 64662 0.854 - - - - 0.854 - - - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
58. MED6 ENSGALG00000029743 9414 0.853 - - - - - - - 0.853 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
59. G3BP1 ENSGALG00000004160 36795 0.851 - - - - 0.851 - - - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
60. PDCD6 ENSGALG00000013400 7611 0.849 - - - - - - - 0.849 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
61. CHMP5 ENSGALG00000013160 13347 0.846 - - - - 0.846 - - - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
62. WDFY3 10775 0.846 - - - - - - - 0.846 - - WD repeat and FYVE domain containing 3, transcript variant X7
63. CDCA7 ENSGALG00000040833 7484 0.846 - - - - 0.846 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
64. ZDHHC6 ENSGALG00000008870 16575 0.845 - - - - 0.845 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
65. UPF3B ENSGALG00000008618 12350 0.844 - - - - 0.844 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
66. PTK7 ENSGALG00000008609 8081 0.844 - - - - - - - 0.844 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
67. FAT1 ENSGALG00000013579 6030 0.844 - - - - - - - 0.844 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
68. PPAT ENSGALG00000013728 7563 0.844 - - - - - - - 0.844 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
69. ACTR6 ENSGALG00000040976 31271 0.843 - - - - - - - 0.843 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
70. HARS ENSGALG00000035080 11602 0.843 - - - - 0.843 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
71. ADAR ENSGALG00000021475 6004 0.842 - - - - - - - 0.842 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
72. PHAX ENSGALG00000014691 8114 0.842 - - - - - - - 0.842 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
73. CWC22 ENSGALG00000009001 5984 0.842 - - - - - - - 0.842 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
74. LGMN ENSGALG00000010811 7401 0.841 - - - - 0.841 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
75. INTS2 ENSGALG00000005269 6966 0.84 - - - - - - - 0.840 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
76. ELOVL5 ENSGALG00000016314 18163 0.839 - - - - 0.839 - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
77. SLC52A3 ENSGALG00000006194 3952 0.839 - - - - - - - 0.839 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
78. RPL22 ENSGALG00000000719 74238 0.839 - - - - 0.839 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
79. GABARAPL2 ENSGALG00000003208 9195 0.839 - - - - 0.839 - - - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
80. VPS36 ENSGALG00000017026 3658 0.839 - - - - - - - 0.839 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
81. NARS ENSGALG00000040506 9506 0.839 - - - - 0.839 - - - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
82. DLD ENSGALG00000007931 11011 0.839 - - - - 0.839 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
83. SLBP ENSGALG00000015712 5586 0.838 - - - - - - - 0.838 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
84. ZNF462 ENSGALG00000015451 12653 0.837 - - - - - - - 0.837 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
85. ACAT2 ENSGALG00000011659 12825 0.836 - - - - 0.836 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
86. CDH3 5050 0.836 - - - - 0.836 - - - - - cadherin 3
87. VEGFC ENSGALG00000010847 2197 0.836 - - - - - - - 0.836 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
88. C9orf89 C9orf89 3056 0.835 - - - - - - - 0.835 - -
89. SNX14 ENSGALG00000015831 2554 0.835 - - - - 0.835 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
90. UMPS ENSGALG00000011770 11331 0.835 - - - - 0.835 - - - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
91. LMO7 ENSGALG00000016920 3809 0.835 - - - - - - - 0.835 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
92. ARHGEF7 ENSGALG00000031009 10090 0.835 - - - - - - - 0.835 - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
93. Mar-05 Mar-05 6330 0.835 - - - - 0.835 - - - - -
94. KIF2A ENSGALG00000014737 16391 0.834 - - - - 0.834 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
95. TIMMDC1 ENSGALG00000024480 9337 0.834 - - - - 0.834 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
96. CREB1 ENSGALG00000008494 2219 0.834 - - - - - - - 0.834 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
97. RRBP1 ENSGALG00000008676 5376 0.834 - - - - - - - 0.834 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
98. WNK2 ENSGALG00000038850 4712 0.834 - - - - 0.834 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
99. SRGAP1 ENSGALG00000009825 6753 0.834 - - - - 0.834 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
100. KLHDC2 ENSGALG00000012244 12903 0.834 - - - - - - - 0.834 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]

There are 166 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA