Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATM

Gene Name Gene ID Reads Annotation
ATM ENSGALG00000017159 893 ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]











Genes with expression patterns similar to ATM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATM ENSGALG00000017159 893 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
2. NCAPG2 ENSGALG00000006525 2319 0.941 - - - - - - 0.941 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
3. HESX1 ENSGALG00000005506 203 0.937 - - - - - - 0.937 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
4. NSRP1 ENSGALG00000004186 1683 0.935 - - - - - - 0.935 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
5. ALDH18A1 ENSGALG00000034655 3038 0.934 - - - - - - 0.934 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
6. CDC42SE2 ENSGALG00000027258 4725 0.932 - - - - - - 0.932 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
7. SGSM3 ENSGALG00000012033 1839 0.932 - - - - - - 0.932 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
8. DNAJC16 ENSGALG00000032832 750 0.932 - - - - - - 0.932 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
9. MBTPS1 ENSGALG00000003293 4843 0.931 - - - - - - 0.931 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
10. MESDC1 1013 0.93 - - - - - - 0.930 - - - mesoderm development candidate 1
11. ENSGALG00000013233 ENSGALG00000013233 3265 0.928 - - - - - - 0.928 - - -
12. TM2D3 ENSGALG00000026271 2566 0.928 - - - - - - 0.928 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
13. GAS6 ENSGALG00000016820 481 0.927 - - - - - - 0.927 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
14. ENTPD8L ENSGALG00000008936 731 0.927 - - - - - - 0.927 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
15. MST1 ENSGALG00000002722 994 0.927 - - - - - - 0.927 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
16. XPO7 ENSGALG00000001838 1875 0.926 - - - - - - 0.926 - - - exportin 7 [Source:NCBI gene;Acc:426925]
17. CCNE2 ENSGALG00000040794 1229 0.925 - - - - - - 0.925 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
18. CCNL1 ENSGALG00000009699 1033 0.925 - - - - - - 0.925 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
19. NUP205 ENSGALG00000011662 4157 0.924 - - - - - - 0.924 - - - nucleoporin 205
20. PTN ENSGALG00000040493 864 0.923 - - - - - - 0.923 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
21. ENSGALG00000028164 ENSGALG00000028164 3325 0.923 - - - - - - 0.923 - - -
22. SUN1 ENSGALG00000003781 3442 0.922 - - - - - - 0.922 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
23. USP54 ENSGALG00000005232 2749 0.921 - - - - - - 0.921 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
24. SCUBE1 ENSGALG00000014178 91 0.921 - - - - - - 0.921 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
25. TCTE1 ENSGALG00000010165 65 0.92 - - - - - - 0.920 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
26. WDSUB1 ENSGALG00000012574 2038 0.92 - - - - - - 0.920 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
27. FAM57A ENSGALG00000004820 1492 0.92 - - - - - - 0.920 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
28. HEMK1 ENSGALG00000002253 40 0.919 - - - - - - 0.919 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
29. ENSGALG00000026925 ENSGALG00000026925 119 0.919 - - - - - - 0.919 - - -
30. MXRA5 ENSGALG00000016635 352 0.919 - - - - - - 0.919 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
31. METTL24 ENSGALG00000041120 60 0.919 - - - - - - 0.919 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
32. MGLL ENSGALG00000032736 612 0.919 - - - - - - 0.919 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
33. SNORA31 SNORA31 183 0.919 - - - - - - 0.919 - - -
34. ASB6 ENSGALG00000004378 1080 0.919 - - - - - - 0.919 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
35. RAB1A ENSGALG00000031582 6929 0.918 - - - - - - 0.918 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
36. GRB14 ENSGALG00000020703 42 0.918 - - - - - - 0.918 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
37. ENSGALG00000016099 ENSGALG00000016099 138 0.917 - - - - - - 0.917 - - -
38. FAM193A ENSGALG00000015667 3075 0.916 - - - - - - 0.916 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
39. C14orf80 C14orf80 1921 0.916 - - - - - - 0.916 - - -
40. SLC25A21 ENSGALG00000010117 536 0.914 - - - - - - 0.914 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
41. ENSGALG00000003619 ENSGALG00000003619 58 0.913 - - - - - - 0.913 - - -
42. TM9SF4 ENSGALG00000006568 567 0.912 - - - - - - 0.912 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
43. WIPI1 ENSGALG00000004215 3359 0.912 - - - - - - 0.912 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
44. FAM183A 242 0.911 - - - - - - 0.911 - - - family with sequence similarity 183 member A, transcript variant 2
45. PIK3R3 ENSGALG00000010335 374 0.91 - - - - - - 0.910 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
46. NIN ENSGALG00000012361 2284 0.909 - - - - - - 0.909 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
47. MBNL2 ENSGALG00000016890 3162 0.909 - - - - - - 0.909 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
48. PKN3 532 0.909 - - - - - - 0.909 - - - protein kinase N3, transcript variant X2
49. SPG11 ENSGALG00000008180 1890 0.908 - - - - - - 0.908 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
50. ZFYVE19 ENSGALG00000008460 2750 0.907 - - - - - - 0.907 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
51. UPK3BL ENSGALG00000001885 1650 0.906 - - - - - - 0.906 - - - uroplakin 3B-like
52. JMJD7 ENSGALG00000026846 1320 0.905 - - - - - - 0.905 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
53. TMEM135 2283 0.904 - - - - - - 0.904 - - - transmembrane protein 135, transcript variant X4
54. INTS7 ENSGALG00000009843 2395 0.903 - - - - - - 0.903 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
55. FTSJ2 FTSJ2 2951 0.903 - - - - - - 0.903 - - -
56. SPAG9 ENSGALG00000034001 2314 0.902 - - - - - - 0.902 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
57. ENSGALG00000002852 ENSGALG00000002852 2687 0.901 - - - - - - 0.901 - - -
58. SDK2 ENSGALG00000031895 2682 0.9 - - - - - - 0.900 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
59. SELM SELM 6366 0.899 - - - - - - 0.899 - - -
60. NT5C2 ENSGALG00000008179 1760 0.899 - - - - - - 0.899 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
61. SCAF4 ENSGALG00000033965 2027 0.898 - - - - - - 0.898 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
62. PGAP2 ENSGALG00000027762 2583 0.897 - - - - - - 0.897 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
63. NDUFV3 ENSGALG00000022813 4456 0.896 - - - - - - 0.896 - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:NCBI gene;Acc:418541]
64. PLCE1 ENSGALG00000039528 151 0.896 - - - - - - 0.896 - - - phospholipase C epsilon 1
65. OCRL ENSGALG00000003920 1812 0.896 - - - - - - 0.896 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
66. WDR47 ENSGALG00000002129 2624 0.895 - - - - - - 0.895 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
67. EIF3I ENSGALG00000003337 28832 0.894 - - - - - - 0.894 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
68. TPR ENSGALG00000005105 2924 0.894 - - - - - - 0.894 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
69. UBE3B ENSGALG00000013851 1672 0.894 - - - - - - 0.894 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
70. SRP72 ENSGALG00000011403 13666 0.893 - - - - - - 0.893 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
71. LFNG ENSGALG00000038515 5178 0.892 - - - - - - 0.892 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
72. CEP290 ENSGALG00000011177 1559 0.891 - - - - - - 0.891 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
73. RNF20 ENSGALG00000015548 7199 0.891 - - - - - - 0.891 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
74. LIMCH1 ENSGALG00000014258 1987 0.891 - - - - - - 0.891 - - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
75. UBE2V2 ENSGALG00000028133 7044 0.89 - - - - - - 0.890 - - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
76. PARD3B ENSGALG00000042645 2893 0.888 - - - - - - 0.888 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
77. MRPL10 ENSGALG00000014387 12386 0.884 - - - - - - 0.884 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
78. PEX6 ENSGALG00000045514 4582 0.883 - - - - - - 0.883 - - - peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]
79. RFT1 ENSGALG00000001945 2446 0.883 - - - - - - 0.883 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
80. KANK4 ENSGALG00000010953 726 0.882 - - - - - - 0.882 - - - KN motif and ankyrin repeat domains 4 [Source:HGNC Symbol;Acc:HGNC:27263]
81. ZNF142 ENSGALG00000011393 2078 0.882 - - - - - - 0.882 - - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
82. SNRNP48 ENSGALG00000013005 1468 0.881 - - - - - - 0.881 - - - small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
83. HYOU1 ENSGALG00000007659 3555 0.88 - - - - - - 0.880 - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
84. BIVM ENSGALG00000016861 3987 0.879 - - - - - - 0.879 - - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
85. SUGP1 ENSGALG00000042132 2771 0.877 - - - - - - 0.877 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
86. TUBA4A ENSGALG00000000433 1367 0.877 - - - - - - 0.877 - - - tubulin alpha 4a
87. TOP3B ENSGALG00000030051 5953 0.876 - - - - - - 0.876 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
88. DIEXF ENSGALG00000009887 4782 0.876 - - - - - - 0.876 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
89. CSTF3 ENSGALG00000011685 4711 0.876 - - - - - - 0.876 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
90. SRPK1 ENSGALG00000037546 1849 0.876 - - - - - - 0.876 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
91. TAF8 ENSGALG00000003498 2071 0.876 - - - - - - 0.876 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
92. ERMP1 ENSGALG00000000438 1136 0.875 - - - - - - 0.875 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
93. COPS8 ENSGALG00000033385 10166 0.875 - - - - - - 0.875 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
94. MPST ENSGALG00000040840 2122 0.874 - - - - - - 0.874 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
95. MBNL1 ENSGALG00000029190 3953 0.873 - - - - - - 0.873 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
96. NAT9 ENSGALG00000007723 2098 0.873 - - - - - - 0.873 - - - N-acetyltransferase 9 (putative), transcript variant X7
97. PARL ENSGALG00000002315 15943 0.871 - - - - - - 0.871 - - - presenilin associated rhomboid like
98. BPHL ENSGALG00000029659 501 0.87 - - - - - - 0.870 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
99. BMI1 ENSGALG00000041267 6618 0.87 - - - - - - 0.870 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
100. TNFAIP8 ENSGALG00000027761 2383 0.869 - - - - - - 0.869 - - - TNF alpha induced protein 8 [Source:NCBI gene;Acc:427384]

There are 165 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA