Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATL2

Gene Name Gene ID Reads Annotation
ATL2 ENSGALG00000037289 7926 atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]











Genes with expression patterns similar to ATL2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATL2 ENSGALG00000037289 7926 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
2. MSRA ENSGALG00000028032 2607 2.17 - - - - - - 0.724 0.704 0.742 - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
3. PHF14 ENSGALG00000038041 13687 1.698 - - - - - - 0.933 0.765 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
4. TFDP2 ENSGALG00000025759 13407 1.602 - - - - - - 0.845 0.757 - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
5. POLR3E ENSGALG00000007008 4010 1.472 - - - - - - 0.722 0.750 - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
6. ARHGAP29 ENSGALG00000005683 3622 1.463 - - - - - - 0.733 0.730 - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
7. LEPROTL1 ENSGALG00000024482 4251 1.436 - - - - - - 0.732 0.704 - - leptin receptor overlapping transcript-like 1
8. GPBP1L1 ENSGALG00000010276 10253 1.419 - - - - - - - 0.708 0.711 - GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
9. EFHD2 ENSGALG00000038313 1745 1.411 - - - - - - - 0.704 0.707 - EF-hand domain family member D2 [Source:HGNC Symbol;Acc:HGNC:28670]
10. DERL2 ENSGALG00000041844 4509 0.983 - - - - - - 0.983 - - - derlin 2 [Source:HGNC Symbol;Acc:HGNC:17943]
11. SMN ENSGALG00000002430 7515 0.966 - - - - - - 0.966 - - - survival of motor neuron [Source:NCBI gene;Acc:374025]
12. CCNE1 ENSGALG00000004494 4945 0.963 - - - - - - 0.963 - - - cyclin E1 [Source:NCBI gene;Acc:426117]
13. PANX2 ENSGALG00000000003 2185 0.946 - - - - - - 0.946 - - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
14. ACVR2B ENSGALG00000006158 8692 0.942 - - - - - - 0.942 - - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
15. HK1 ENSGALG00000004222 10733 0.921 - - - - - - 0.921 - - - hexokinase 1 [Source:NCBI gene;Acc:373889]
16. NFS1 ENSGALG00000001568 7113 0.916 - - - - - - 0.916 - - - NFS1, cysteine desulfurase [Source:NCBI gene;Acc:419133]
17. RTN4IP1 ENSGALG00000015343 4366 0.913 - - - - - - 0.913 - - - reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
18. DUSP19 ENSGALG00000043268 5543 0.911 - - - - - - 0.911 - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
19. PCBD1 ENSGALG00000027835 18019 0.91 - - - - - - 0.910 - - - pterin-4 alpha-carbinolamine dehydratase 1 [Source:NCBI gene;Acc:395729]
20. SEC23A ENSGALG00000010150 11679 0.905 - - - - - - 0.905 - - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
21. SELK SELK 15022 0.898 - - - - - - 0.898 - - -
22. AP3S1 ENSGALG00000002341 12388 0.891 - - - - - - 0.891 - - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
23. RCN2 ENSGALG00000039284 17848 0.881 - - - - - - - 0.881 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
24. SSR1 ENSGALG00000012798 62626 0.856 - - - - - - - 0.856 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
25. PHB ENSGALG00000038604 21632 0.852 - - - - - - 0.852 - - - prohibitin [Source:NCBI gene;Acc:419980]
26. NUP85 ENSGALG00000007974 21249 0.852 - - - - - - - 0.852 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
27. FADS1 ENSGALG00000007127 5231 0.85 - - - - - - - 0.850 - - fatty acid desaturase 1
28. URM1 ENSGALG00000004971 17880 0.847 - - - - - - - 0.847 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
29. PHPT1 ENSGALG00000039061 17343 0.846 - - - - - - - 0.846 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
30. BPNT1 ENSGALG00000009576 7445 0.843 - - - - - - - 0.843 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
31. ERLIN2 ENSGALG00000003092 18251 0.843 - - - - - - - 0.843 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
32. MORN4 ENSGALG00000006149 7772 0.84 - - - - - - - 0.840 - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
33. MED21 ENSGALG00000027435 5766 0.84 - - - - - - - 0.840 - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
34. RFX3 ENSGALG00000010179 305 0.839 - - - - - - - - 0.839 - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
35. NDUFS5 ENSGALG00000003625 27698 0.838 - - - - - - - 0.838 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
36. PLK1 ENSGALG00000006110 12892 0.837 - - - - - - - 0.837 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
37. MRPL2 ENSGALG00000008597 16500 0.837 - - - - - - - 0.837 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
38. COIL ENSGALG00000003158 7806 0.836 - - - - - - - 0.836 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
39. GPR162 ENSGALG00000022926 7181 0.836 - - - - - - - 0.836 - - G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
40. DERA ENSGALG00000013095 4135 0.835 - - - - - - - 0.835 - - deoxyribose-phosphate aldolase [Source:NCBI gene;Acc:418176]
41. AZIN1 ENSGALG00000029295 11085 0.835 - - - - - - - 0.835 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
42. TMEM258 ENSGALG00000038292 31116 0.834 - - - - - - - 0.834 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
43. C11H16ORF80 C11H16ORF80 18673 0.834 - - - - - - - 0.834 - -
44. CASP6 ENSGALG00000012186 6639 0.831 - - - - - - - 0.831 - - caspase 6 [Source:NCBI gene;Acc:395477]
45. SSR2 ENSGALG00000000764 32190 0.83 - - - - - - - 0.830 - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
46. ATP5J 14451 0.829 - - - - - - - 0.829 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
47. ENSGALG00000001861 ENSGALG00000001861 10150 0.829 - - - - - - - 0.829 - -
48. FAM18B1 ENSGALG00000001335 5177 0.828 - - - - - - - 0.828 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
49. SDF4 ENSGALG00000001872 6382 0.827 - - - - - - - 0.827 - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
50. HERPUD2 ENSGALG00000040364 6073 0.827 - - - - - - - 0.827 - - HERPUD family member 2 [Source:HGNC Symbol;Acc:HGNC:21915]
51. POLR2B ENSGALG00000011387 4864 0.823 - - - - - - - 0.823 - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
52. MED7 ENSGALG00000003870 4244 0.822 - - - - - - - 0.822 - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
53. DNMT3A ENSGALG00000041454 9607 0.821 - - - - - - - 0.821 - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
54. SF3B3 ENSGALG00000002531 19397 0.82 - - - - - - - 0.820 - - splicing factor 3b subunit 3, transcript variant X2
55. GCSH ENSGALG00000032679 29231 0.82 - - - - - - - 0.820 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
56. PANK1 ENSGALG00000006431 2910 0.819 - - - - - - - 0.819 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
57. FAM207A ENSGALG00000007513 8748 0.819 - - - - - - - 0.819 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
58. PAPSS1 ENSGALG00000010542 5631 0.818 - - - - - - - 0.818 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
59. PRKACB ENSGALG00000028530 12506 0.818 - - - - - - - 0.818 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
60. AARS2 ENSGALG00000035337 1761 0.817 - - - - - - - - 0.817 - alanyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421436]
61. CSRP2BP CSRP2BP 4679 0.816 - - - - - - - 0.816 - -
62. MRPS22 ENSGALG00000005367 8307 0.815 - - - - - - - 0.815 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
63. HCN2 ENSGALG00000001342 7506 0.814 - - - - - - - 0.814 - - hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]
64. DAD1 ENSGALG00000035626 32604 0.813 - - - - - - - 0.813 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
65. UBFD1 ENSGALG00000006117 5242 0.813 - - - - - - - 0.813 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
66. SUCO ENSGALG00000003081 4116 0.813 - - - - - - - 0.813 - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
67. PAFAH1B2 ENSGALG00000027918 418 0.813 - - - - - - - - 0.813 - platelet activating factor acetylhydrolase 1b catalytic subunit 2 [Source:NCBI gene;Acc:419765]
68. DNMT3B ENSGALG00000041461 12959 0.812 - - - - - - - 0.812 - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
69. YIPF6 ENSGALG00000035973 3333 0.811 - - - - - - - 0.811 - - Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
70. PLEKHA5 ENSGALG00000013134 3656 0.811 - - - - - - - 0.811 - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
71. PEMT ENSGALG00000004875 4094 0.81 - - - - - - - 0.810 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
72. TRAPPC6B ENSGALG00000010157 7567 0.809 - - - - - - - 0.809 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
73. CLTC ENSGALG00000005139 22130 0.807 - - - - - - 0.807 - - - clathrin heavy chain [Source:NCBI gene;Acc:395272]
74. RRP36 ENSGALG00000028056 7560 0.806 - - - - - - - 0.806 - - ribosomal RNA processing 36
75. PTPLAD1 PTPLAD1 292 0.806 - - - - - - - - 0.806 -
76. NANS ENSGALG00000015320 10552 0.805 - - - - - - - 0.805 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
77. CHMP4B ENSGALG00000002095 17422 0.804 - - - - - - - 0.804 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
78. NCAM1 ENSGALG00000007839 19929 0.804 - - - - - - 0.804 - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
79. ENSGALG00000013067 ENSGALG00000013067 10741 0.804 - - - - - - - 0.804 - -
80. SLC12A4 ENSGALG00000034179 5674 0.803 - - - - - - - 0.803 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
81. LSG1 ENSGALG00000007058 4591 0.802 - - - - - - - 0.802 - - large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]
82. ADI1 ENSGALG00000025796 8636 0.802 - - - - - - - 0.802 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
83. MFAP1 ENSGALG00000028295 6043 0.801 - - - - - - - 0.801 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
84. EIF5B ENSGALG00000016764 30681 0.8 - - - - - - - 0.800 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
85. MSH6 ENSGALG00000008957 6396 0.8 - - - - - - - 0.800 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
86. DNM1L ENSGALG00000012929 6174 0.799 - - - - - - - - 0.799 - dynamin 1 like [Source:NCBI gene;Acc:418132]
87. NUDT7 ENSGALG00000034395 7396 0.799 - - - - - - - 0.799 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
88. ATP6AP1 ENSGALG00000008836 4343 0.799 - - - - - - - 0.799 - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
89. B4GAL-T7 B4GAL-T7 12356 0.799 - - - - - - - 0.799 - -
90. HINT3 ENSGALG00000044342 5674 0.797 - - - - - - - 0.797 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
91. SLMO2 SLMO2 9207 0.797 - - - - - - - 0.797 - -
92. TM4SF18 4553 0.796 - - - - - - - 0.796 - - transmembrane 4 L six family member 18, transcript variant X2
93. EXOC2 ENSGALG00000012837 4914 0.795 - - - - - - - 0.795 - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
94. CDK2AP1 ENSGALG00000034919 5469 0.795 - - - - - - - 0.795 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
95. CEP70 ENSGALG00000012087 7992 0.795 - - - - - - - 0.795 - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
96. SRBD1 ENSGALG00000009990 4568 0.795 - - - - - - - 0.795 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
97. ZMPSTE24 ENSGALG00000000855 5144 0.794 - - - - - - - 0.794 - - zinc metallopeptidase STE24 [Source:HGNC Symbol;Acc:HGNC:12877]
98. CENPK ENSGALG00000014753 12414 0.793 - - - - - - - 0.793 - - centromere protein K [Source:NCBI gene;Acc:427162]
99. EPB41L1 ENSGALG00000034171 3616 0.793 - - - - - - - 0.793 - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
100. HERC3 ENSGALG00000010363 3229 0.792 - - - - - - - 0.792 - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:NCBI gene;Acc:422514]

There are 458 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA