Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATL1

Gene Name Gene ID Reads Annotation
ATL1 ENSGALG00000012339 3789 atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]











Genes with expression patterns similar to ATL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATL1 ENSGALG00000012339 3789 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
2. BSDC1 ENSGALG00000003405 3701 2.687 - - - - - - 0.863 0.960 - 0.864 BSD domain containing 1 [Source:NCBI gene;Acc:419658]
3. PDCD2L 4843 2.528 - - - - - - 0.747 0.998 - 0.783 programmed cell death 2-like
4. ARHGAP11A ENSGALG00000009731 6817 1.9 - - - - - - - 0.988 - 0.912 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
5. RNF113A ENSGALG00000000538 3985 1.832 - - - - - - 0.834 0.998 - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
6. FXN ENSGALG00000015108 1867 1.793 - - - - - - - 0.998 - 0.795 frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
7. DTX2 ENSGALG00000001905 1475 1.776 - - - - - - 0.902 - - 0.874 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
8. TTI1 ENSGALG00000006791 1218 1.768 - - - - - - 0.887 - - 0.881 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
9. GGA3 ENSGALG00000007992 3566 1.758 - - - - - - 0.760 0.998 - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
10. SRA1 ENSGALG00000040453 266 1.752 - - - - - - 0.900 - - 0.852 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
11. JKAMP ENSGALG00000012009 5781 1.747 - - - - - - 0.749 0.998 - - JNK1/MAPK8-associated membrane protein [Source:NCBI gene;Acc:423530]
12. IWS1 ENSGALG00000001803 2305 1.706 - - - - - - 0.895 - - 0.811 IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
13. NNT ENSGALG00000014869 8496 1.705 - - - - - - 0.908 - - 0.797 nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
14. MITF ENSGALG00000039583 865 1.697 - - - - - - 0.860 - - 0.837 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
15. WWC1 ENSGALG00000001826 4666 1.69 - - - - - - 0.766 - - 0.924 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
16. CALCOCO2 ENSGALG00000001525 3121 1.637 - - - - - - 0.800 - - 0.837 calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
17. RFFL ENSGALG00000002225 928 1.606 - - - - - - 0.887 - - 0.719 ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
18. GARNL3 ENSGALG00000000847 3423 1.602 - - - - - - 0.831 - - 0.771 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
19. TBC1D12 ENSGALG00000034044 5588 1.577 - - - - - - 0.850 - - 0.727 TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
20. ENSGALG00000000514 ENSGALG00000000514 9906 1.544 - - - - - - 0.790 - 0.754 -
21. AMDHD2 ENSGALG00000009234 1730 1.516 - - - - - - - - 0.702 0.814 Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
22. ENSGALG00000007035 ENSGALG00000007035 8473 1.5 - - - - - - 0.763 - 0.737 -
23. ZNHIT6 ENSGALG00000008658 4383 1.485 - - - - - - 0.756 - - 0.729 zinc finger HIT-type containing 6 [Source:HGNC Symbol;Acc:HGNC:26089]
24. FAM125B FAM125B 2953 0.999 - - - - - - - 0.999 - -
25. TMTC2 ENSGALG00000010975 7040 0.998 - - - - - - - 0.998 - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
26. MADD ENSGALG00000008181 2273 0.998 - - - - - - - 0.998 - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
27. CARKD CARKD 2914 0.998 - - - - - - - 0.998 - -
28. ENSGALG00000010034 ENSGALG00000010034 3293 0.998 - - - - - - - 0.998 - -
29. SCLT1 2397 0.998 - - - - - - - 0.998 - - sodium channel and clathrin linker 1, transcript variant X6
30. KIAA0895L 1739 0.998 - - - - - - - 0.998 - - KIAA0895 like, transcript variant X4
31. HBXIP HBXIP 8637 0.998 - - - - - - - 0.998 - -
32. RRN3 ENSGALG00000041989 3934 0.998 - - - - - - - 0.998 - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
33. UBALD1 ENSGALG00000007619 8536 0.998 - - - - - - - 0.998 - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
34. NPFF1 NPFF1 3177 0.997 - - - - - - - 0.997 - -
35. YTHDC2 2266 0.997 - - - - - - - 0.997 - - YTH domain containing 2, transcript variant X3
36. RIC8A ENSGALG00000004191 6094 0.997 - - - - - - - 0.997 - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
37. EIF3D ENSGALG00000012529 40887 0.997 - - - - - - - 0.997 - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
38. PGM1 ENSGALG00000011016 3391 0.996 - - - - - - - 0.996 - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
39. DDX24 ENSGALG00000010884 5485 0.996 - - - - - - - 0.996 - - DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]
40. CHMP5 ENSGALG00000013160 13347 0.996 - - - - - - - 0.996 - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
41. RBFA ENSGALG00000036067 6542 0.995 - - - - - - - 0.995 - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
42. CHTOP ENSGALG00000042129 24112 0.991 - - - - - - - 0.991 - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
43. CASP3 ENSGALG00000010638 11572 0.991 - - - - - - - 0.991 - - caspase 3 [Source:NCBI gene;Acc:395476]
44. NECAP1 ENSGALG00000037656 5181 0.988 - - - - - - - 0.988 - - NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:HGNC:24539]
45. MMADHC ENSGALG00000012473 9026 0.986 - - - - - - - 0.986 - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
46. MRPS17 ENSGALG00000002379 30243 0.976 - - - - - - - 0.976 - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
47. NDUFA2 ENSGALG00000040626 27899 0.975 - - - - - - - 0.975 - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
48. NOC4L ENSGALG00000002272 9644 0.969 - - - - - - - 0.969 - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
49. SMC3 ENSGALG00000008585 16618 0.967 - - - - - - - 0.967 - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
50. SQLE ENSGALG00000036915 4172 0.967 - - - - - - - 0.967 - - squalene epoxidase [Source:NCBI gene;Acc:420335]
51. PRKG1 ENSGALG00000003805 4654 0.966 - - - - - - - 0.966 - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
52. ATP5J 14451 0.96 - - - - - - 0.960 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
53. TIPIN ENSGALG00000007649 3565 0.957 - - - - - - 0.957 - - - TIMELESS interacting protein [Source:NCBI gene;Acc:415548]
54. CENPP ENSGALG00000004687 6707 0.953 - - - - - - - 0.953 - - centromere protein P [Source:NCBI gene;Acc:415952]
55. GCLM ENSGALG00000005782 15789 0.952 - - - - - - - 0.952 - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
56. PTPN11 ENSGALG00000004821 2658 0.951 - - - - - - - - - 0.951 protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
57. PHF2 ENSGALG00000039208 2003 0.949 - - - - - - - - - 0.949 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
58. LONP2 ENSGALG00000003942 3380 0.946 - - - - - - 0.946 - - - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
59. TCN2 3959 0.943 - - - - - - - - - 0.943 transcobalamin 2
60. PLCL2 ENSGALG00000011248 162 0.941 - - - - - - - - - 0.941 phospholipase C like 2 [Source:HGNC Symbol;Acc:HGNC:9064]
61. B4GAL-T7 B4GAL-T7 12356 0.94 - - - - - - 0.940 - - -
62. PDCL3 ENSGALG00000016772 14897 0.937 - - - - - - 0.937 - - - phosducin like 3 [Source:NCBI gene;Acc:418709]
63. YBX3 ENSGALG00000031890 819 0.936 - - - - - - - - - 0.936 Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
64. VWC2 ENSGALG00000013081 492 0.935 - - - - - - - - - 0.935 von Willebrand factor C domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30200]
65. HDAC4 ENSGALG00000004288 2124 0.933 - - - - - - - - - 0.933 histone deacetylase 4 [Source:NCBI gene;Acc:374207]
66. COL4A6 ENSGALG00000008266 6374 0.931 - - - - - - - 0.931 - - collagen type IV alpha 6 chain [Source:HGNC Symbol;Acc:HGNC:2208]
67. ALYREF ENSGALG00000007237 48479 0.931 - - - - - - - 0.931 - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
68. CSRNP1 ENSGALG00000027905 3141 0.923 - - - - - - - - - 0.923 cysteine and serine rich nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:14300]
69. SNX30 ENSGALG00000015660 1087 0.92 - - - - - - - - - 0.920 sorting nexin family member 30 [Source:HGNC Symbol;Acc:HGNC:23685]
70. GBA2 ENSGALG00000002412 2913 0.917 - - - - - - 0.917 - - - glucosylceramidase beta 2 [Source:HGNC Symbol;Acc:HGNC:18986]
71. CPQ ENSGALG00000030866 3962 0.915 - - - - - - 0.915 - - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
72. RB1 ENSGALG00000016997 3712 0.912 - - - - - - 0.912 - - - retinoblastoma 1 [Source:NCBI gene;Acc:386582]
73. CLK3 ENSGALG00000001362 2171 0.912 - - - - - - 0.912 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
74. JOSD1 ENSGALG00000041766 1445 0.911 - - - - - - - - - 0.911 Josephin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28953]
75. ARHGEF3 ENSGALG00000005481 683 0.91 - - - - - - 0.910 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
76. TRIM24 ENSGALG00000012823 2725 0.907 - - - - - - - - - 0.907 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
77. C11H19ORF12 C11H19ORF12 5149 0.906 - - - - - - 0.906 - - -
78. HYAL1 ENSGALG00000000785 1778 0.906 - - - - - - 0.906 - - - hyaluronoglucosaminidase 1, transcript variant X3
79. C7orf55 C7orf55 7083 0.905 - - - - - - 0.905 - - -
80. C5orf24 ENSGALG00000006371 1573 0.905 - - - - - - - - - 0.905 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
81. FXYD6 ENSGALG00000025937 4073 0.905 - - - - - - 0.905 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
82. TP53BP1 ENSGALG00000042201 708 0.903 - - - - - - 0.903 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
83. FDFT1 ENSGALG00000016665 3053 0.903 - - - - - - 0.903 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
84. LRR1 ENSGALG00000012230 1062 0.903 - - - - - - 0.903 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
85. LPXN 133 0.903 - - - - - - 0.903 - - - leupaxin, transcript variant X4
86. C7orf63 C7orf63 147 0.902 - - - - - - 0.902 - - -
87. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.902 - - - - - - 0.902 - - - pseudouridylate synthase-like 1, transcript variant X8
88. CLIP1 ENSGALG00000004467 1058 0.902 - - - - - - - - - 0.902 CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
89. UTP11L UTP11L 11927 0.902 - - - - - - - 0.902 - -
90. PIGF ENSGALG00000020057 201 0.901 - - - - - - 0.901 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
91. TNFRSF11B ENSGALG00000043167 911 0.901 - - - - - - 0.901 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
92. ANGPTL2 ENSGALG00000000927 2580 0.901 - - - - - - 0.901 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
93. KLF11 ENSGALG00000016440 65 0.9 - - - - - - 0.900 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
94. PTDSS2 ENSGALG00000004300 682 0.899 - - - - - - 0.899 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
95. BCAR3 358 0.899 - - - - - - 0.899 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
96. THOC3 ENSGALG00000024172 7617 0.899 - - - - - - 0.899 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
97. PIGX ENSGALG00000006408 5783 0.899 - - - - - - 0.899 - - - phosphatidylinositol glycan anchor biosynthesis class X [Source:HGNC Symbol;Acc:HGNC:26046]
98. CLASP1 ENSGALG00000011645 1378 0.898 - - - - - - 0.898 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
99. SLC28A3 ENSGALG00000012593 131 0.898 - - - - - - 0.898 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
100. YWHAQ ENSGALG00000016433 3450 0.897 - - - - - - 0.897 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]

There are 567 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA