Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATG4D

Gene Name Gene ID Reads Annotation
ATG4D ATG4D 648










Genes with expression patterns similar to ATG4D

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ATG4D ATG4D 648 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. commd3 ENSDARG00000045402 1601 2.381 - 0.766 - - - 0.773 0.842 - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
3. ncaph2 ENSDARG00000033757 1042 1.659 0.745 0.914 - - - - - - - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
4. CECR2 ENSDARG00000078310 903 1.659 - 0.908 - - - - 0.751 - - cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
5. pon3 pon3 1146 1.654 - 0.838 - - - - 0.816 - -
6. phf3 ENSDARG00000034768 1372 1.621 - - - - - 0.801 0.820 - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
7. ddx51 ENSDARG00000025854 691 1.608 - 0.761 - - - - 0.847 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Source:ZFIN;Acc:ZDB-GENE-040927-28]
8. CR848664.2 CR848664.2 876 1.589 - - - - - 0.872 0.717 - -
9. dlx2a ENSDARG00000079964 1253 1.586 0.711 0.875 - - - - - - - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
10. lsr ENSDARG00000099291 881 1.584 - 0.824 - - - - 0.760 - - lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
11. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.583 - 0.818 - - - - 0.765 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
12. ahctf1 ENSDARG00000077530 2315 1.572 - 0.792 - - - 0.780 - - - AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
13. gadd45bb ENSDARG00000013576 331 1.568 0.809 - - - - 0.759 - - - growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
14. cdk12 ENSDARG00000063726 1220 1.568 0.744 - - - - 0.824 - - - cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
15. zgc:171566 ENSDARG00000105118 340 1.568 0.785 - - - - 0.783 - - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
16. ebag9 ENSDARG00000040021 2217 1.565 - - - - - 0.853 0.712 - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
17. ap2b1 ENSDARG00000035152 2912 1.564 - - - - - 0.764 0.800 - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
18. c1galt1b ENSDARG00000055561, ENSDARG00000113870 1795 1.552 - - - 0.752 - 0.800 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9075]
19. tgfbr2 tgfbr2 1117 1.543 - 0.745 - - - - 0.798 - -
20. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.541 - 0.727 - - - 0.814 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
21. gltpd1 gltpd1 377 1.539 - 0.756 - - - 0.783 - - -
22. zgc:109744 ENSDARG00000070800 262 1.538 - 0.786 - - - 0.752 - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
23. plekhg6 ENSDARG00000086056 368 1.53 - 0.732 - - - 0.798 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
24. tex261 ENSDARG00000044584 513 1.515 - 0.766 - - - - 0.749 - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
25. cox11 ENSDARG00000061004, ENSDARG00000115002 423 1.506 - 0.796 - 0.710 - - - - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
26. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 1.496 - - - - - 0.788 0.708 - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
27. mtx1a ENSDARG00000025500 275 1.494 - - - - - 0.772 0.722 - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
28. MALSU1 MALSU1 1251 1.493 - - - - - 0.721 0.772 - -
29. fancd2 ENSDARG00000053574 247 1.492 - 0.749 - - - 0.743 - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
30. rangap1a ENSDARG00000041317 1456 1.482 - 0.776 - - - 0.706 - - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
31. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 1.469 - 0.716 - - - 0.753 - - - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
32. LIN9 ENSDARG00000028475 227 1.469 - - - - - 0.742 0.727 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
33. CU571336.1 ENSDARG00000099892 2164 1.468 - 0.719 - - - - 0.749 - -
34. fbxo42 ENSDARG00000087545 262 1.464 - 0.752 - - - - 0.712 - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
35. exoc3l4 ENSDARG00000058180 923 1.464 - 0.723 - - - 0.741 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
36. ppp2r5d ENSDARG00000014428 771 1.459 - 0.758 - - - 0.701 - - - protein phosphatase 2, regulatory subunit B', delta [Source:ZFIN;Acc:ZDB-GENE-040426-2568]
37. si:ch211-208h1.1 si:ch211-208h1.1 262 1.458 - - - - - 0.752 0.706 - -
38. FAM126B 588 1.458 - 0.725 - - - 0.733 - - - family with sequence similarity 126 member B
39. afap1 ENSDARG00000055284 730 1.453 - 0.705 - - - - 0.748 - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
40. birc5a ENSDARG00000075621 2256 1.452 - 0.742 - - - 0.710 - - - baculoviral IAP repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030826-1]
41. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.451 - 0.740 - - - - 0.711 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
42. ripk1l ENSDARG00000006677 593 1.445 - 0.734 - - - 0.711 - - - receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
43. tmem8a ENSDARG00000032795 677 1.444 - 0.739 - - - 0.705 - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
44. ptges ENSDARG00000020136, ENSDARG00000115727 747 0.911 - - - - - 0.911 - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
45. appl2 ENSDARG00000078139, ENSDARG00000100151 1043 0.907 - 0.907 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 [Source:ZFIN;Acc:ZDB-GENE-081016-2]
46. xrcc6 ENSDARG00000071551, ENSDARG00000111115, ENSDARG00000114945 724 0.905 - 0.905 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6420]
47. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 0.902 - 0.902 - - - - - - - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
48. tead3a ENSDARG00000074321 2240 0.899 - 0.899 - - - - - - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
49. lims1 ENSDARG00000026985 2072 0.898 0.898 - - - - - - - - LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
50. fam155b ENSDARG00000060152, ENSDARG00000114398 221 0.898 0.898 - - - - - - - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
51. si:dkeyp-53d3.5 ENSDARG00000101542 171 0.896 0.896 - - - - - - - - si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]
52. CR847925.1 CR847925.1 835 0.892 - 0.892 - - - - - - -
53. si:ch211-191j22.3 ENSDARG00000095459 959 0.892 0.892 - - - - - - - - si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
54. AL935186.4 ENSDARG00000110268 1701 0.891 - - - - - - 0.891 - -
55. BX004880.1 BX004880.1 638 0.886 - - - - - 0.886 - - -
56. kdm6a ENSDARG00000061759 1154 0.885 - - - - - - 0.885 - - lysine (K)-specific demethylase 6A [Source:ZFIN;Acc:ZDB-GENE-081105-56]
57. zswim5 ENSDARG00000055900 4243 0.879 - 0.879 - - - - - - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
58. gpatch4 ENSDARG00000091931 923 0.878 - 0.878 - - - - - - - G patch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041008-158]
59. vps36 ENSDARG00000057021 636 0.877 0.877 - - - - - - - - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
60. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 0.876 - - - - - - 0.876 - - secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
61. CR774184.1 ENSDARG00000096891 404 0.874 0.874 - - - - - - - -
62. adamtsl7 ENSDARG00000055439 575 0.872 - - - - - 0.872 - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
63. ZNF740 ZNF740 676 0.871 0.871 - - - - - - - -
64. chmp4c ENSDARG00000007418, ENSDARG00000110750 729 0.869 - 0.869 - - - - - - - charged multivesicular body protein 4C [Source:ZFIN;Acc:ZDB-GENE-050417-389]
65. si:ch211-286b5.5 ENSDARG00000096661 3136 0.868 - - - - - - 0.868 - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
66. eppk1 ENSDARG00000096359 4315 0.866 - 0.866 - - - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
67. proc proc 1038 0.866 - 0.866 - - - - - - -
68. coro2a ENSDARG00000005210 1479 0.866 - - - - - - 0.866 - - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
69. CLEC4A CLEC4A 1016 0.865 - 0.865 - - - - - - -
70. ipmkb ENSDARG00000029291 625 0.865 - 0.865 - - - - - - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]
71. palm1b ENSDARG00000007818 2128 0.864 - - - - - 0.864 - - - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
72. BX088711.1 BX088711.1 125 0.863 0.863 - - - - - - - -
73. ubr2 ENSDARG00000070164 3960 0.862 - 0.862 - - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
74. sptssa ENSDARG00000071203 2306 0.861 - 0.861 - - - - - - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
75. loxl2a ENSDARG00000044010 1906 0.86 - 0.860 - - - - - - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
76. galk2 ENSDARG00000004059 122 0.859 - 0.859 - - - - - - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
77. AMPD2 AMPD2 1723 0.859 - 0.859 - - - - - - -
78. memo1 ENSDARG00000010823 1681 0.859 - - - - - 0.859 - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
79. med4 ENSDARG00000041503 395 0.859 0.859 - - - - - - - - mediator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-438]
80. CARD14 ENSDARG00000103485 888 0.858 - - - - - 0.858 - - - caspase recruitment domain family, member 14 [Source:ZFIN;Acc:ZDB-GENE-090310-1]
81. phldb1a ENSDARG00000061093 1637 0.858 - - - - - 0.858 - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
82. adssl ENSDARG00000012399 2271 0.858 - 0.858 - - - - - - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
83. jagn1b ENSDARG00000014995 2063 0.856 - 0.856 - - - - - - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
84. emc8 ENSDARG00000017093 1947 0.855 - 0.855 - - - - - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
85. rnaset2 ENSDARG00000036282 2226 0.855 - - - - - 0.855 - - - ribonuclease T2 [Source:ZFIN;Acc:ZDB-GENE-030131-2513]
86. HIST1H4J_1 HIST1H4J_1 4066 0.855 - - - - - - 0.855 - -
87. gpnmb ENSDARG00000062688 259 0.853 - - - - - - 0.853 - - glycoprotein (transmembrane) nmb [Source:ZFIN;Acc:ZDB-GENE-060503-106]
88. nup43 ENSDARG00000043884 794 0.851 - 0.851 - - - - - - - nucleoporin 43 [Source:ZFIN;Acc:ZDB-GENE-040426-2533]
89. sccpdhb ENSDARG00000024564 707 0.85 - - - - - - 0.850 - - saccharopine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-041010-211]
90. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.848 - - - - - - 0.848 - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
91. rhbg ENSDARG00000009018 1131 0.847 - 0.847 - - - - - - - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
92. ginm1 ENSDARG00000021975 1393 0.846 - - - - - 0.846 - - - glycoprotein integral membrane 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5900]
93. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 0.846 - - - - - 0.846 - - - bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
94. kdm4b ENSDARG00000099675 2037 0.845 - 0.845 - - - - - - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
95. efr3a_1 ENSDARG00000005163, ENSDARG00000115083 571 0.845 - - - - - 0.845 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
96. ckap5 ENSDARG00000102674 5068 0.844 - 0.844 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
97. acaca ENSDARG00000078512, ENSDARG00000114071 386 0.843 - - - - - 0.843 - - - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
98. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 0.842 - 0.842 - - - - - - - histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
99. stxbp3 ENSDARG00000008142 2604 0.842 - 0.842 - - - - - - - syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
100. man2b1 ENSDARG00000001897 1042 0.842 - 0.842 - - - - - - - mannosidase, alpha, class 2B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-52]

There are 1178 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA