Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ATG4C

Gene Name Gene ID Reads Annotation
ATG4C ENSGALG00000010985 6102 autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]











Genes with expression patterns similar to ATG4C

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATG4C ENSGALG00000010985 6102 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
2. RNF214 ENSGALG00000036993 3729 1.728 - - - - - - 0.781 0.947 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
3. UBE2D1 ENSGALG00000021213 5876 1.721 - - - - - - 0.820 0.901 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
4. RUVBL1 ENSGALG00000005931 9379 1.699 - - - - - - 0.835 0.864 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
5. MED24 ENSGALG00000013506 5403 1.679 - - - - - - 0.763 0.916 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
6. PIGK ENSGALG00000009015 7942 1.677 - - - - - - 0.707 0.970 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
7. KCTD6 ENSGALG00000007111 3557 1.668 - - - - - - 0.743 0.925 - - potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]
8. CHMP6 ENSGALG00000026428 18026 1.661 - - - - - - 0.732 0.929 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
9. TBL1XR1 ENSGALG00000039182 16983 1.661 - - - - - - 0.764 0.897 - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
10. CDC42BPA ENSGALG00000009158 3926 1.647 - - - - - - 0.753 0.894 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
11. BCLAF1 ENSGALG00000013935 7596 1.636 - - - - - - 0.706 0.930 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
12. SCO1 ENSGALG00000030475 7304 1.616 - - - - - - 0.707 0.909 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
13. AHCTF1 ENSGALG00000010630 4809 1.615 - - - - - - 0.715 0.900 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
14. LIMD1 ENSGALG00000035623 7282 1.594 - - - - - - 0.703 0.891 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
15. FXR1 ENSGALG00000008864 10250 1.592 - - - - - - 0.704 0.888 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
16. PAN3 ENSGALG00000017092 5387 1.585 - - - - - - 0.738 0.847 - - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
17. CTSC ENSGALG00000017239 7651 1.58 - - - - - - 0.733 0.847 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
18. HPCAL1 ENSGALG00000016443 6633 1.575 - - - - - - 0.704 0.871 - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
19. MRPL20 ENSGALG00000001542 28764 1.535 - - - - - - 0.758 0.777 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
20. HSPA4 ENSGALG00000040882 20966 1.525 - - - - 0.711 - 0.814 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
21. MBD3 ENSGALG00000001101 37265 1.51 - - - - - - 0.704 0.806 - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
22. WTAP ENSGALG00000011660 10811 1.423 - - - - - - 0.705 - 0.718 - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
23. BCL11A ENSGALG00000034048 4111 1.415 - - - - - - 0.713 - 0.702 - B cell CLL/lymphoma 11A [Source:NCBI gene;Acc:421199]
24. BAZ1B ENSGALG00000029408 5921 0.952 - - - - - - - 0.952 - - bromodomain adjacent to zinc finger domain 1B [Source:HGNC Symbol;Acc:HGNC:961]
25. NDUFAF1 ENSGALG00000008587 14779 0.951 - - - - - - - 0.951 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
26. ZC3H3 ENSGALG00000043265 1638 0.949 - - - - - - - 0.949 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
27. TMEM59 ENSGALG00000010746 4669 0.949 - - - - - - - 0.949 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
28. CAND1 4541 0.947 - - - - - - - 0.947 - - cullin associated and neddylation dissociated 1
29. NET1 ENSGALG00000008437 9850 0.945 - - - - - - - 0.945 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
30. CLN6 ENSGALG00000007981 5656 0.944 - - - - - - - 0.944 - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
31. TRIM24 ENSGALG00000012823 2725 0.943 - - - - - - - 0.943 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
32. PPCS ENSGALG00000004882 5759 0.943 - - - - - - - 0.943 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
33. CHAF1A ENSGALG00000001126 6506 0.943 - - - - - - - 0.943 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
34. GLG1 ENSGALG00000039818 6221 0.942 - - - - - - - 0.942 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
35. ARHGEF4 ENSGALG00000002193 558 0.941 - - - - - - - 0.941 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
36. BRCC3 ENSGALG00000005383 4844 0.941 - - - - - - - 0.941 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
37. RNMTL1 RNMTL1 2889 0.94 - - - - - - - 0.940 - -
38. NGEF ENSGALG00000036327 1048 0.94 - - - - - - - 0.940 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
39. DDRGK1 ENSGALG00000016003 9098 0.94 - - - - - - - 0.940 - - DDRGK domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16110]
40. LATS2 4776 0.939 - - - - - - - 0.939 - - large tumor suppressor kinase 2
41. TMEM57 ENSGALG00000001067 3367 0.939 - - - - - - - 0.939 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
42. GOLGB1 ENSGALG00000041494 2376 0.938 - - - - - - - 0.938 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
43. STX18 ENSGALG00000015012 1489 0.938 - - - - - - - 0.938 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
44. PNISR ENSGALG00000015483 7711 0.938 - - - - - - - 0.938 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
45. ABCA3 ENSGALG00000037837 1606 0.938 - - - - - - - 0.938 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
46. PEO1 PEO1 6747 0.937 - - - - - - - 0.937 - -
47. MTERFD1 MTERFD1 3640 0.937 - - - - - - - 0.937 - -
48. PYCR1 ENSGALG00000007300 7987 0.937 - - - - - - - 0.937 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
49. SMARCC1 ENSGALG00000032642 4842 0.937 - - - - - - - 0.937 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
50. ENSGALG00000014190 ENSGALG00000014190 5735 0.936 - - - - - - - 0.936 - -
51. gga-mir-1772 ENSGALG00000025300 2892 0.936 - - - - - - - 0.936 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
52. SRP72 ENSGALG00000011403 13666 0.935 - - - - - - - 0.935 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
53. DCTN5 ENSGALG00000006088 3113 0.935 - - - - - - - 0.935 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
54. VGLL4 ENSGALG00000004937 3762 0.935 - - - - - - - 0.935 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
55. ENSGALG00000003150 ENSGALG00000003150 10001 0.935 - - - - - - - 0.935 - -
56. REXO1 ENSGALG00000001043 3179 0.935 - - - - - - - 0.935 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
57. NR2F2 ENSGALG00000007000 4911 0.934 - - - - - - - 0.934 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
58. CARS2 ENSGALG00000016847 3814 0.934 - - - - - - - 0.934 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
59. REV3L ENSGALG00000015033 1917 0.933 - - - - - - - 0.933 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
60. FBXO33 ENSGALG00000010192 2917 0.933 - - - - - - - 0.933 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
61. ARFRP1 ENSGALG00000006101 3743 0.933 - - - - - - - 0.933 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
62. PKP4 ENSGALG00000012561 3087 0.933 - - - - - - - 0.933 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
63. CCDC61 ENSGALG00000006714 8066 0.933 - - - - - - - 0.933 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
64. ADIPOR1 ENSGALG00000000094 1862 0.932 - - - - - - - 0.932 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
65. NEMF ENSGALG00000012263 2250 0.932 - - - - - - - 0.932 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
66. TRMT44 ENSGALG00000015594 1490 0.932 - - - - - - - 0.932 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
67. WASH1 WASH1 3240 0.932 - - - - - - - 0.932 - -
68. EDEM1 ENSGALG00000008320 3117 0.932 - - - - - - - 0.932 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
69. TXNDC5 ENSGALG00000012784 4678 0.931 - - - - - - - 0.931 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
70. TUBAL3 ENSGALG00000008444 2979 0.931 - - - - - - - 0.931 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
71. FGF18 ENSGALG00000002203 551 0.93 - - - - - - - 0.930 - - fibroblast growth factor 18 [Source:NCBI gene;Acc:395453]
72. HDGFL2 ENSGALG00000027068 1300 0.93 - - - - - - - 0.930 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
73. MRPS23 ENSGALG00000005559 10360 0.93 - - - - - - - 0.930 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
74. DNAJA1 ENSGALG00000023066 3820 0.93 - - - - - - - 0.930 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
75. TFEB ENSGALG00000039878 881 0.93 - - - - - - - 0.930 - - transcription factor EB [Source:NCBI gene;Acc:419922]
76. CHMP3 ENSGALG00000015805 11581 0.93 - - - - - - - 0.930 - - charged multivesicular body protein 3
77. METTL22 ENSGALG00000033603 696 0.93 - - - - - - - 0.930 - - methyltransferase like 22 [Source:NCBI gene;Acc:425865]
78. RGS17 ENSGALG00000026034 707 0.929 - - - - - - - 0.929 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
79. ARRDC4 ENSGALG00000007012 1039 0.929 - - - - - - - 0.929 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
80. ACSL1 ENSGALG00000010628 2560 0.929 - - - - - - - 0.929 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
81. TCEA1 ENSGALG00000015274 2706 0.929 - - - - - - - 0.929 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
82. NSRP1 ENSGALG00000004186 1683 0.929 - - - - - - - 0.929 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
83. MTMR9 ENSGALG00000016649 2055 0.929 - - - - - - - 0.929 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
84. UTP6 ENSGALG00000003260 4909 0.929 - - - - - - - 0.929 - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
85. MAST2 ENSGALG00000010313 2975 0.929 - - - - - - - 0.929 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
86. CC2D2A ENSGALG00000014514 1180 0.929 - - - - - - - 0.929 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
87. APOOL ENSGALG00000006978 1953 0.928 - - - - - - - 0.928 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
88. SLC25A1 ENSGALG00000041760 4744 0.928 - - - - - - - 0.928 - - solute carrier family 25 member 1, transcript variant X2
89. DMB2 ENSGALG00000038393 1257 0.928 - - - - - - - 0.928 - - major histocompatibility complex, class II, DM beta 2 [Source:NCBI gene;Acc:417051]
90. ASB9 ENSGALG00000016563 2780 0.928 - - - - - - - 0.928 - - ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
91. UCK2 ENSGALG00000003510 2512 0.928 - - - - - - - 0.928 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
92. KHDRBS1 ENSGALG00000003272 4249 0.928 - - - - - - - 0.928 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
93. DUSP14 ENSGALG00000027641 3662 0.928 - - - - - - - 0.928 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
94. FGFR1OP ENSGALG00000011423 2418 0.927 - - - - - - - 0.927 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
95. INOS INOS 313 0.927 - - - - - - - 0.927 - -
96. EFHD1 ENSGALG00000001428 2831 0.927 - - - - - - - 0.927 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
97. TSC22D2 ENSGALG00000027591 6594 0.927 - - - - - - - 0.927 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
98. GTDC1 ENSGALG00000012424 1446 0.927 - - - - - - - 0.927 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
99. KDM4A ENSGALG00000010074 7219 0.926 - - - - - - - 0.926 - - lysine demethylase 4A
100. FIGN ENSGALG00000011069 311 0.926 - - - - - - - 0.926 - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]

There are 515 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA