Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ATG3

Gene Name Gene ID Reads Annotation
ATG3 ENSGALG00000015204 11277 autophagy related 3 [Source:NCBI gene;Acc:418369]











Genes with expression patterns similar to ATG3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATG3 ENSGALG00000015204 11277 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 autophagy related 3 [Source:NCBI gene;Acc:418369]
2. FYTTD1 ENSGALG00000007581 9341 1.752 - - - - - - 0.826 0.926 - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
3. LSM5 ENSGALG00000041625 22307 1.75 - - - - - - 0.878 0.872 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
4. METAP2 ENSGALG00000011377 16311 1.742 - - - - - - 0.886 0.856 - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
5. EHD3 ENSGALG00000009086 14407 1.732 - - - - - - 0.884 0.848 - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
6. COMMD10 ENSGALG00000002308 7442 1.719 - - - - - - 0.788 0.931 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
7. KRR1 ENSGALG00000010227 11783 1.7 - - - - - - 0.762 0.938 - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
8. MRPL22 ENSGALG00000003919 2760 1.684 - - - - - - 0.751 0.933 - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
9. DRG1 ENSGALG00000006921 10791 1.657 - - - - - - 0.722 0.935 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
10. ERP44 ENSGALG00000013452 5352 1.645 - - - - - - 0.714 0.931 - - endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
11. EXOC8 ENSGALG00000043280 3596 1.634 - - - - - - 0.702 0.932 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
12. RERE ENSGALG00000002232 8724 1.63 - - - - - - 0.726 0.904 - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
13. MORF4L1 ENSGALG00000008146 29940 1.619 - - - - - - 0.780 0.839 - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
14. RABIF ENSGALG00000000436 6449 1.615 - - - - - - 0.753 0.862 - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
15. TUBB6 ENSGALG00000031275 17690 1.596 - - - - - - 0.709 0.887 - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
16. RIOK3 ENSGALG00000015004 4249 1.595 - - - - - - 0.744 0.851 - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
17. LIMD2 ENSGALG00000000529 30617 1.593 - - - - - - 0.830 0.763 - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
18. CUL3 ENSGALG00000005108 9571 1.58 - - - - - - 0.762 0.818 - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
19. IP6K2 ENSGALG00000005701 12539 1.573 - - - - - - 0.765 0.808 - - inositol hexakisphosphate kinase 2 [Source:NCBI gene;Acc:416010]
20. PMPCA ENSGALG00000001950 6766 1.55 - - - - - - 0.736 0.814 - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
21. EI24 ENSGALG00000038097 24081 0.963 - - - - - - - 0.963 - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
22. ATP6V1C1 ENSGALG00000034099 9898 0.952 - - - - - - - 0.952 - - ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]
23. C14orf1 C14orf1 14289 0.943 - - - - - - - 0.943 - -
24. BTBD1 ENSGALG00000006020 14157 0.936 - - - - - - - 0.936 - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
25. NDUFA9 ENSGALG00000017282 14358 0.931 - - - - - - - 0.931 - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
26. KIF18B ENSGALG00000031553 3192 0.931 - - - - - - - 0.931 - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
27. COMMD8 ENSGALG00000026279 13509 0.931 - - - - - - - 0.931 - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
28. PI4K2B ENSGALG00000031538 2607 0.93 - - - - - - - 0.930 - - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
29. DDX54 ENSGALG00000007490 8729 0.928 - - - - - - - 0.928 - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
30. PSMC3IP ENSGALG00000019741 5428 0.928 - - - - - - - 0.928 - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
31. ASAH1 ENSGALG00000026364 2783 0.927 - - - - - - - 0.927 - - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
32. NHLRC1 ENSGALG00000012688 1476 0.926 - - - - - - - 0.926 - - NHL repeat containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21576]
33. RFWD2 1215 0.926 - - - - - - - 0.926 - - ring finger and WD repeat domain 2, transcript variant X6
34. DCAF4 ENSGALG00000009345 2604 0.926 - - - - - - - 0.926 - - DDB1 and CUL4 associated factor 4
35. ISY1 ENSGALG00000005012 7477 0.925 - - - - - - - 0.925 - - ISY1 splicing factor homolog
36. LIX1 ENSGALG00000015290 7589 0.924 - - - - - - - 0.924 - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
37. HGS ENSGALG00000007224 3487 0.923 - - - - - - - 0.923 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:HGNC:4897]
38. MAN2C1 ENSGALG00000001615 2362 0.922 - - - - - - - 0.922 - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
39. ADAT1 ENSGALG00000000908 1484 0.922 - - - - - - - 0.922 - - adenosine deaminase, tRNA specific 1 [Source:NCBI gene;Acc:415886]
40. AIF1L ENSGALG00000029834 13866 0.921 - - - - - - - 0.921 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
41. CREG1 ENSGALG00000040426 1188 0.921 - - - - - - - 0.921 - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
42. FOCAD ENSGALG00000015071 3677 0.921 - - - - - - - 0.921 - - focadhesin [Source:NCBI gene;Acc:427233]
43. KIF21A ENSGALG00000007098 5919 0.921 - - - - - - - 0.921 - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
44. GTF3A ENSGALG00000017098 9264 0.921 - - - - - - - 0.921 - - general transcription factor IIIA [Source:NCBI gene;Acc:418931]
45. IQCK ENSGALG00000028197 596 0.92 - - - - - - - 0.920 - - IQ motif containing K [Source:HGNC Symbol;Acc:HGNC:28556]
46. DACT1 ENSGALG00000012023 1008 0.919 - - - - - - - 0.919 - - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
47. TP73 ENSGALG00000001006 335 0.918 - - - - - - - 0.918 - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
48. PALB2 ENSGALG00000006078 1549 0.918 - - - - - - - 0.918 - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
49. NUMA1 ENSGALG00000001258 8406 0.915 - - - - - - - 0.915 - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
50. RANBP1 ENSGALG00000002107 17715 0.913 - - - - - - 0.913 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
51. TMEM70 ENSGALG00000033568 10720 0.912 - - - - - - 0.912 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
52. COMT ENSGALG00000002024 2483 0.911 - - - - - - - 0.911 - - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
53. PIGQ ENSGALG00000001985 1584 0.909 - - - - - - - 0.909 - - phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
54. EBNA1BP2 ENSGALG00000009045 17453 0.908 - - - - - - 0.908 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
55. ZDHHC14 ENSGALG00000013695 2648 0.907 - - - - - - - 0.907 - - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
56. CZH9ORF80 CZH9ORF80 12760 0.903 - - - - - - 0.903 - - -
57. GREB1 ENSGALG00000016455 12794 0.902 - - - - - - - 0.902 - - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
58. SS18 ENSGALG00000015119 4687 0.9 - - - - - - - 0.900 - - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
59. PPP1R2 ENSGALG00000029789 11594 0.899 - - - - - - 0.899 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
60. ZRANB2 ENSGALG00000011340 18994 0.897 - - - - - - - 0.897 - - zinc finger RANBP2-type containing 2 [Source:NCBI gene;Acc:424717]
61. RABGGTB ENSGALG00000011388 11654 0.895 - - - - - - 0.895 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
62. BSG ENSGALG00000001328 37947 0.894 - - - - - - 0.894 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
63. BET1L ENSGALG00000004172 5305 0.893 - - - - - - 0.893 - - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
64. EIF4A2 ENSGALG00000008684 58507 0.893 - - - - - - 0.893 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
65. YWHAZ ENSGALG00000031387 84985 0.889 - - - - - - 0.889 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
66. ENSGALG00000017396 ENSGALG00000017396 9028 0.889 - - - - - - 0.889 - - -
67. ILF2 ENSGALG00000011570 23050 0.887 - - - - - - 0.887 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
68. HSPA4 ENSGALG00000040882 20966 0.883 - - - - - - 0.883 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
69. CSE1L ENSGALG00000004707 20653 0.883 - - - - - - 0.883 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
70. RUVBL1 ENSGALG00000005931 9379 0.882 - - - - - - 0.882 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
71. RBM17 ENSGALG00000006332 12656 0.882 - - - - - - 0.882 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
72. RANGAP1 ENSGALG00000011966 20170 0.879 - - - - - - 0.879 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
73. API5 ENSGALG00000037968 18265 0.878 - - - - - - 0.878 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
74. MRPL20 ENSGALG00000001542 28764 0.877 - - - - - - 0.877 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
75. WDR43 ENSGALG00000032529 12235 0.876 - - - - - - 0.876 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
76. PSMB2 ENSGALG00000026421 51885 0.876 - - - - - - 0.876 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
77. NDUFA12 ENSGALG00000011325 19807 0.875 - - - - - - 0.875 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
78. NOC4L ENSGALG00000002272 9644 0.875 - - - - - - 0.875 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
79. ERP29 ENSGALG00000023510 47100 0.875 - - - - - - - 0.875 - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
80. SKP2 ENSGALG00000003547 14637 0.874 - - - - - - 0.874 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
81. TARDBP ENSGALG00000002906 24748 0.873 - - - - - - 0.873 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
82. GLO1 ENSGALG00000010127 31662 0.87 - - - - - - 0.870 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
83. FCF1 ENSGALG00000010275 24928 0.868 - - - - - - 0.868 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
84. ATP2B1 ENSGALG00000030550 15123 0.868 - - - - - - 0.868 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
85. GLRX3 ENSGALG00000010464 22578 0.867 - - - - - - 0.867 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
86. NEK6 ENSGALG00000001118 20333 0.864 - - - - - - 0.864 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
87. KIF2C ENSGALG00000010120 8999 0.864 - - - - - - 0.864 - - - kinesin family member 2C, transcript variant X1
88. MRPL15 ENSGALG00000041086 16820 0.864 - - - - - - 0.864 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
89. ACTR2 ENSGALG00000008779 17812 0.863 - - - - - - 0.863 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
90. HMGB2 ENSGALG00000010745 89235 0.862 - - - - - - 0.862 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
91. SMC4 ENSGALG00000009553 15715 0.862 - - - - - - 0.862 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
92. UMPS ENSGALG00000011770 11331 0.862 - - - - - - 0.862 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
93. HOXA4 ENSGALG00000022622 22327 0.86 - - - - - - - 0.860 - - homeobox A4 [Source:NCBI gene;Acc:395307]
94. RPF2 ENSGALG00000037087 12788 0.859 - - - - - - 0.859 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
95. PTGFRN ENSGALG00000015464 14584 0.859 - - - - - - 0.859 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
96. SSR3 ENSGALG00000028683 24334 0.857 - - - - - - 0.857 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
97. NDUFV2 ENSGALG00000036625 29234 0.857 - - - - - - 0.857 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
98. PARP1 ENSGALG00000009228 39433 0.856 - - - - - - 0.856 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
99. TMEM167A ENSGALG00000027332 13862 0.855 - - - - - - 0.855 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
100. BCAR1 ENSGALG00000042895 8222 0.855 - - - - - - - 0.855 - - BCAR1, Cas family scaffold protein [Source:HGNC Symbol;Acc:HGNC:971]

There are 868 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA