Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ATF3

Gene Name Gene ID Reads Annotation
ATF3 ENSGALG00000025887 814 activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]











Genes with expression patterns similar to ATF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATF3 ENSGALG00000025887 814 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]
2. TSC2 ENSGALG00000005646 489 1.508 - - - - - - 0.797 - 0.711 - TSC complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:12363]
3. AUH ENSGALG00000021843 349 1.48 - - - - - - 0.747 - - 0.733 AU RNA binding methylglutaconyl-CoA hydratase [Source:NCBI gene;Acc:427269]
4. RAD54B ENSGALG00000043597 1699 1.462 - - - - - - 0.718 0.744 - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
5. SLC28A3 ENSGALG00000012593 131 1.423 - - - - - - - - 0.711 0.712 solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
6. ARHGAP15 ENSGALG00000012421 58 0.929 - - - - - - 0.929 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
7. HNF4G ENSGALG00000042621 484 0.9 - - - - - - 0.900 - - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
8. PDE4D ENSGALG00000014727 53 0.885 - - - - - - 0.885 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
9. FGB ENSGALG00000009262 1169 0.884 - - - - - - 0.884 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
10. LOC770996 ENSGALG00000016570 635 0.881 - - - - - - 0.881 - - - L-gulonolactone oxidase-like
11. ENSGALG00000014900 ENSGALG00000014900 335 0.877 - - - - - - 0.877 - - -
12. ENSGALG00000020753 ENSGALG00000020753 159 0.871 - - - - - - 0.871 - - -
13. TDRD5 ENSGALG00000033634 40 0.869 - - - - - - 0.869 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
14. ENDOV 121 0.868 - - - - - - 0.868 - - - endonuclease V
15. MAP3K1 ENSGALG00000014718 60 0.867 - - - - - - 0.867 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
16. ENSGALG00000029120 ENSGALG00000029120 73 0.866 - - - - - - 0.866 - - -
17. TRIM71 ENSGALG00000019622 1633 0.865 - - - - - - 0.865 - - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
18. CPNE1 ENSGALG00000040856 610 0.864 - - - - - - 0.864 - - - copine 1 [Source:NCBI gene;Acc:419134]
19. FAM82B FAM82B 374 0.863 - - - - - - 0.863 - - -
20. RIPPLY2 ENSGALG00000015845 34 0.862 - - - - - - 0.862 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
21. LRRC2 ENSGALG00000013634 69 0.861 - - - - - - 0.861 - - - leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
22. ZDHHC5 ENSGALG00000007362 296 0.86 - - - - - - 0.860 - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
23. TRAM2 ENSGALG00000016673 438 0.86 - - - - - - 0.860 - - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
24. RSFR 61 0.86 - - - - - - 0.860 - - - leukocyte ribonuclease A-2
25. APBA2 ENSGALG00000003930 408 0.858 - - - - - - 0.858 - - - amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579]
26. SULT1C SULT1C 118 0.856 - - - - - - 0.856 - - -
27. KYNU ENSGALG00000012418 353 0.853 - - - - - - 0.853 - - - kynureninase, transcript variant X3
28. ANO3 ENSGALG00000013311 16 0.853 - - - - - - 0.853 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
29. C18H17ORF67 ENSGALG00000024428 10 0.853 - - - - - - 0.853 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
30. TEX2 ENSGALG00000003496 23 0.853 - - - - - - 0.853 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
31. MUC5B MUC5B 62 0.853 - - - - - - 0.853 - - -
32. ENSGALG00000023475 ENSGALG00000023475 19 0.853 - - - - - - 0.853 - - -
33. DCBLD1 ENSGALG00000014907 19 0.853 - - - - - - 0.853 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
34. FAM21A FAM21A 251 0.852 - - - - - - 0.852 - - -
35. YTHDC1 ENSGALG00000035906 471 0.848 - - - - - - 0.848 - - - YTH domain containing 1 [Source:NCBI gene;Acc:422656]
36. LAMP1 ENSGALG00000037697 247 0.848 - - - - - - 0.848 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
37. NAPRT1 NAPRT1 227 0.847 - - - - - - 0.847 - - -
38. PCP4 ENSGALG00000022819 880 0.847 - - - - - - 0.847 - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
39. FBXL18 ENSGALG00000004611 97 0.846 - - - - - - 0.846 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
40. PRDM6 ENSGALG00000005351 2078 0.845 - - - - - - 0.845 - - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
41. SVOPL ENSGALG00000012812 27 0.844 - - - - - - 0.844 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
42. MOCOS ENSGALG00000013149 25 0.843 - - - - - - 0.843 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
43. HAUS8 ENSGALG00000003727 351 0.842 - - - - - - 0.842 - - - HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
44. CPNE7 ENSGALG00000000507 54 0.842 - - - - - - 0.842 - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
45. NKD1 ENSGALG00000003767 76 0.841 - - - - - - 0.841 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
46. PLCXD1 ENSGALG00000016721 289 0.841 - - - - - - 0.841 - - - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
47. FAM76B ENSGALG00000017202 688 0.84 - - - - - - 0.840 - - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]
48. VTI1B ENSGALG00000009526 133 0.84 - - - - - - 0.840 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
49. ATP6V1AL ENSGALG00000000048 21 0.839 - - - - - - 0.839 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
50. PYROXD1 ENSGALG00000013173 89 0.838 - - - - - - 0.838 - - - pyridine nucleotide-disulphide oxidoreductase domain 1 [Source:NCBI gene;Acc:418191]
51. NHP2 ENSGALG00000033666 17253 0.837 - - - - - - 0.837 - - - NHP2 ribonucleoprotein [Source:NCBI gene;Acc:416218]
52. LMCD1 ENSGALG00000008349 928 0.837 - - - - - - 0.837 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
53. KCTD5 ENSGALG00000006423 192 0.836 - - - - - - 0.836 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
54. TSPAN14 ENSGALG00000002414 69 0.835 - - - - - - 0.835 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
55. LCAT ENSGALG00000028928 484 0.831 - - - - - - 0.831 - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
56. ENSGALG00000001515 ENSGALG00000001515 833 0.83 - - - - - - 0.830 - - -
57. KDM5A ENSGALG00000012986 624 0.83 - - - - - - 0.830 - - - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
58. POFUT1 ENSGALG00000006594 367 0.828 - - - - - - 0.828 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
59. ELK4 ENSGALG00000042137 69 0.828 - - - - - - 0.828 - - - ELK4, ETS transcription factor
60. C9orf171 C9orf171 35 0.826 - - - - - - 0.826 - - -
61. ENKD1 ENSGALG00000001204 362 0.825 - - - - - - 0.825 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
62. TP53I3 ENSGALG00000016502 178 0.825 - - - - - - 0.825 - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
63. SNORD2 SNORD2 51 0.824 - - - - - - 0.824 - - -
64. HOXCDX1L ENSGALG00000007656 53 0.824 - - - - - - 0.824 - - - homeobox protein CDX-1-like
65. IFT27 ENSGALG00000042990 221 0.823 - - - - - - 0.823 - - - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
66. MMRN2 770 0.822 - - - - - - 0.822 - - - multimerin 2, transcript variant X1
67. MYSM1 ENSGALG00000010869 113 0.821 - - - - - - 0.821 - - - Myb like, SWIRM and MPN domains 1 [Source:NCBI gene;Acc:424671]
68. KDELC2 ENSGALG00000017158 479 0.818 - - - - - - 0.818 - - - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
69. CHIC1 ENSGALG00000040956 1177 0.818 - - - - - - 0.818 - - - cysteine rich hydrophobic domain 1 [Source:NCBI gene;Acc:422318]
70. CADM2 ENSGALG00000043393 810 0.817 - - - - - - 0.817 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
71. ENSGALG00000026371 ENSGALG00000026371 106 0.817 - - - - - - 0.817 - - -
72. ENSGALG00000012463 ENSGALG00000012463 242 0.816 - - - - - - 0.816 - - -
73. TSPAN4 ENSGALG00000006837 150 0.816 - - - - - - 0.816 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
74. PCGF2 ENSGALG00000018815 38 0.816 - - - - - - 0.816 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
75. FAH ENSGALG00000006482 589 0.815 - - - - - - 0.815 - - - fumarylacetoacetate hydrolase [Source:NCBI gene;Acc:415482]
76. NCOA6 ENSGALG00000001182 83 0.813 - - - - - - 0.813 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
77. WDPCP ENSGALG00000008866 272 0.812 - - - - - - 0.812 - - - WD repeat containing planar cell polarity effector [Source:HGNC Symbol;Acc:HGNC:28027]
78. NSUN5 ENSGALG00000000891 1356 0.81 - - - - - - 0.810 - - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
79. RRNAD1 ENSGALG00000000576 1397 0.81 - - - - - - 0.810 - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24273]
80. PRKCE ENSGALG00000010000 99 0.81 - - - - - - 0.810 - - - protein kinase C epsilon, transcript variant X1
81. RAB8B ENSGALG00000003487 295 0.809 - - - - - - 0.809 - - - RAB8B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30273]
82. ANKS1B ENSGALG00000011549 440 0.809 - - - - - - 0.809 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
83. ASB13 ENSGALG00000008401 181 0.808 - - - - - - 0.808 - - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
84. MSX2 ENSGALG00000038848 6950 0.808 - - - - - - - - - 0.808 msh homeobox 2 [Source:NCBI gene;Acc:395245]
85. DPEP2 ENSGALG00000003433 109 0.807 - - - - - - 0.807 - - - dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
86. MMR1L4 ENSGALG00000028304 81 0.806 - - - - - - 0.806 - - - Gallus gallus macrophage mannose receptor 1-like 4 (MMR1L4), mRNA. [Source:RefSeq mRNA;Acc:NM_001319013]
87. RCL1 ENSGALG00000015024 133 0.806 - - - - - - 0.806 - - - RNA terminal phosphate cyclase like 1 [Source:HGNC Symbol;Acc:HGNC:17687]
88. ARPC1B ENSGALG00000032588 2407 0.805 - - - - - - 0.805 - - - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
89. MKX ENSGALG00000007426 65 0.804 - - - - - - 0.804 - - - mohawk homeobox [Source:HGNC Symbol;Acc:HGNC:23729]
90. FRMD4B ENSGALG00000037791 2457 0.804 - - - - - - 0.804 - - - FERM domain containing 4B [Source:HGNC Symbol;Acc:HGNC:24886]
91. GHDC ENSGALG00000003333 178 0.802 - - - - - - 0.802 - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
92. CCDC40 ENSGALG00000007042 596 0.801 - - - - - - 0.801 - - - coiled-coil domain containing 40 [Source:HGNC Symbol;Acc:HGNC:26090]
93. KRT222 ENSGALG00000003859 53 0.8 - - - - - - 0.800 - - - keratin 222 [Source:NCBI gene;Acc:420046]
94. CAPN7 ENSGALG00000041731 114 0.799 - - - - - - 0.799 - - - calpain 7 [Source:HGNC Symbol;Acc:HGNC:1484]
95. LOC100857820 ENSGALG00000001824 16 0.798 - - - - - - 0.798 - - - uncharacterized LOC100857820
96. BBS12 142 0.797 - - - - - - 0.797 - - - Bardet-Biedl syndrome 12
97. AGL ENSGALG00000005407 93 0.796 - - - - - - 0.796 - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
98. MLF1 ENSGALG00000009654 619 0.795 - - - - - - 0.795 - - - myeloid leukemia factor 1, transcript variant X3
99. MGRN1 ENSGALG00000037492 372 0.794 - - - - - 0.794 - - - - mahogunin ring finger 1 [Source:HGNC Symbol;Acc:HGNC:20254]
100. RELN ENSGALG00000008193 43 0.792 - - - - - - 0.792 - - - reelin [Source:NCBI gene;Acc:427850]

There are 95 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA