Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ATF2

Gene Name Gene ID Reads Annotation
ATF2 ENSGALG00000009287 73 activating transcription factor 2 [Source:NCBI gene;Acc:395727]











Genes with expression patterns similar to ATF2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ATF2 ENSGALG00000009287 73 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 activating transcription factor 2 [Source:NCBI gene;Acc:395727]
2. TMEM200B ENSGALG00000024318 117 1.686 - - - - - - - 0.740 - 0.946 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
3. PDE3A ENSGALG00000013143 28 1.653 - - 0.759 - - - - - - 0.894 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
4. MTHFD1L ENSGALG00000012412 35 1.464 - - - 0.720 - - - 0.744 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:HGNC Symbol;Acc:HGNC:21055]
5. GAREM GAREM 16 0.997 - - - - - - - 0.997 - -
6. TNN ENSGALG00000004538 21 0.937 - - - - - - - - - 0.937 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
7. CLIC3 ENSGALG00000038789 233 0.934 - - - - - - - - - 0.934 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
8. NMBR ENSGALG00000013813 15 0.933 - - - - - - - - - 0.933 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
9. KAT6B ENSGALG00000005035 301 0.932 - - - - - - - - - 0.932 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
10. ZEB2 ENSGALG00000040465 315 0.931 - - - - - - - - - 0.931 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
11. TNFAIP3 ENSGALG00000013861 11 0.928 - - - - - - - - - 0.928 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
12. gga-mir-6544 ENSGALG00000027916 19 0.928 - - - - - - - - - 0.928 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
13. C3orf58 ENSGALG00000002347 27 0.927 - - - - - - - - - 0.927 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
14. AKAP11 ENSGALG00000022739 82 0.926 - - - - - - - - - 0.926 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
15. BOK ENSGALG00000005772 117 0.925 - - - - - - - - - 0.925 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
16. GSS ENSGALG00000003281 57 0.924 - - - - - - - - - 0.924 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
17. TRAK2 ENSGALG00000008370 46 0.922 - - - - - - - - - 0.922 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
18. ZMYND10 ENSGALG00000035883 58 0.921 - - - - - - - - - 0.921 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
19. FAM154B FAM154B 175 0.917 - - - - - - - - - 0.917
20. TBX5 ENSGALG00000008253 820 0.917 - - - - - - - - - 0.917 T-box 5 [Source:NCBI gene;Acc:373988]
21. PXK ENSGALG00000007052 121 0.916 - - - - - - - - - 0.916 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
22. TRMT61A ENSGALG00000011522 14 0.915 - - - - - - - - - 0.915 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
23. SLC7A2 ENSGALG00000013627 58 0.914 - - - - - - - - - 0.914 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
24. TGFBRAP1 ENSGALG00000016795 81 0.914 - - - - - - - - - 0.914 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
25. INADL INADL 51 0.913 - - - - - - - - - 0.913
26. ING5 ENSGALG00000006317 149 0.91 - - - - - - - - - 0.910 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
27. SLC20A1 ENSGALG00000013740 40 0.908 - - - - - - - - - 0.908 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
28. KCNB1 ENSGALG00000004758 620 0.908 - - - - - - - - - 0.908 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
29. TNFAIP2 ENSGALG00000011446 32 0.908 - - - - - - - - - 0.908 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
30. SRR ENSGALG00000003155 93 0.907 - - - - - - - - - 0.907 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
31. TRAF-5 TRAF-5 102 0.906 - - - - - - - - - 0.906
32. PKD2 ENSGALG00000010921 55 0.906 - - - - - - - - - 0.906 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
33. PHF11 ENSGALG00000019094 770 0.905 - - - - - - - - - 0.905 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
34. SENP7 ENSGALG00000044642 48 0.903 - - - - - - - - - 0.903 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
35. SMOC2 ENSGALG00000011205 340 0.898 - - - - - - - - - 0.898 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
36. SMEK1 SMEK1 95 0.896 - - - - - - - - - 0.896
37. ROGDI ENSGALG00000001841 313 0.895 - - - - - - - - - 0.895 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
38. OSBPL2 ENSGALG00000005195 94 0.895 - - - - - - - - - 0.895 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
39. ZNF385B ENSGALG00000009012 290 0.895 - - - - - - - - - 0.895 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
40. SRRD ENSGALG00000005614 234 0.891 - - - - - - - - - 0.891 SRR1 domain containing [Source:NCBI gene;Acc:416908]
41. BMP2K ENSGALG00000010885 37 0.89 - - - - - - - - - 0.890 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
42. KIF24 ENSGALG00000005806 124 0.889 - - - - - - - - - 0.889 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
43. LMBR1 ENSGALG00000030379 29 0.889 - - - - - - - - - 0.889 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
44. HS1BP3 ENSGALG00000016486 380 0.888 - - - - - - - - - 0.888 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
45. MYH11 ENSGALG00000006520 166 0.886 - - - - - - - - - 0.886 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
46. CREB5 ENSGALG00000038265 92 0.886 - - - - - - - - - 0.886 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
47. TM6SF1 ENSGALG00000006027 20 0.883 - - - - - - - - - 0.883 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
48. ERRFI1 ENSGALG00000000535 83 0.883 - - - - - - - - - 0.883 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
49. MVP ENSGALG00000040471 1407 0.882 - - - - - - - - - 0.882 major vault protein [Source:NCBI gene;Acc:420049]
50. ITM2B ENSGALG00000016996 1112 0.882 - - - - - - - - - 0.882 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
51. PCDH7 ENSGALG00000033883 6 0.879 - - - - - 0.879 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
52. KIAA0895 ENSGALG00000036301 280 0.879 - - - - - - - - - 0.879 KIAA0895 [Source:HGNC Symbol;Acc:HGNC:22206]
53. FAM192A ENSGALG00000021473 10213 0.874 - - - - - - - - - 0.874 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
54. MYCN ENSGALG00000016462 1930 0.874 - - - - - - - - - 0.874 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
55. SERAC1 ENSGALG00000013732 24 0.874 - - - - - - - - - 0.874 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
56. NME6 ENSGALG00000038044 1231 0.871 - - - - - - - - - 0.871 NME/NM23 nucleoside diphosphate kinase 6
57. NAALAD2 202 0.87 - - - - - - - - - 0.870 N-acetylated alpha-linked acidic dipeptidase 2, transcript variant X1
58. SLC30A9 ENSGALG00000031415 36 0.864 - - - - - - - - - 0.864 solute carrier family 30 member 9
59. LEO1 ENSGALG00000004696 111 0.862 - - - - - - - - - 0.862 LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
60. ERCC6L ENSGALG00000003881 332 0.861 - - - - - - - - - 0.861 ERCC excision repair 6 like, spindle assembly checkpoint helicase [Source:HGNC Symbol;Acc:HGNC:20794]
61. DMXL1 ENSGALG00000002227 88 0.855 - - - - - - - - - 0.855 Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
62. COQ2 ENSGALG00000041294 25 0.855 - - - - - - - - - 0.855 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
63. TMEM116 ENSGALG00000004760 217 0.852 - - - - - - - - - 0.852 transmembrane protein 116 [Source:HGNC Symbol;Acc:HGNC:25084]
64. TMEM129 ENSGALG00000015710 1519 0.852 - - - - - - - - - 0.852 transmembrane protein 129 [Source:NCBI gene;Acc:422900]
65. ELOVL1 ENSGALG00000009988 4000 0.851 - - - - - - - - - 0.851 ELOVL fatty acid elongase 1 [Source:NCBI gene;Acc:424564]
66. BLOC1S2 ENSGALG00000005794 544 0.851 - - - - - - - - - 0.851 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
67. MRM1 ENSGALG00000039523 2009 0.849 - - - - - - - - - 0.849 mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
68. KCNB2 ENSGALG00000031693 31 0.849 - - - - - - - - - 0.849 potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
69. RNF170 ENSGALG00000015386 296 0.848 - - - - - - - - - 0.848 ring finger protein 170 [Source:NCBI gene;Acc:427296]
70. ALDH6A1 ENSGALG00000010211 29 0.845 - - - - - - - - - 0.845 aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
71. ZMIZ1 ENSGALG00000004850 114 0.844 - - - - - - - - - 0.844 zinc finger MIZ-type containing 1 [Source:HGNC Symbol;Acc:HGNC:16493]
72. CTNNAL1 ENSGALG00000013207 44 0.843 - - - - - - - 0.843 - - catenin alpha like 1 [Source:HGNC Symbol;Acc:HGNC:2512]
73. ENDOV 121 0.84 - - - - - - - - - 0.840 endonuclease V
74. NR5A2 ENSGALG00000002182 392 0.84 - - - - - - - - - 0.840 nuclear receptor subfamily 5 group A member 2 [Source:NCBI gene;Acc:395961]
75. EXOSC8 ENSGALG00000017048 2939 0.839 - - - - - - - - - 0.839 exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
76. TUSC1 22 0.838 - - - - - - - - - 0.838 tumor suppressor candidate 1
77. CASP7 ENSGALG00000008933 506 0.838 - - - - - 0.838 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
78. TPGS1 ENSGALG00000026780 688 0.835 - - - - - - - - - 0.835 tubulin polyglutamylase complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25058]
79. LASP1 ENSGALG00000039299 138 0.833 - - 0.833 - - - - - - - LIM and SH3 protein 1 [Source:NCBI gene;Acc:420002]
80. FAM117B ENSGALG00000008466 81 0.831 - - - - - - - - - 0.831 family with sequence similarity 117 member B [Source:HGNC Symbol;Acc:HGNC:14440]
81. RAD1 ENSGALG00000003365 1417 0.83 - - - - - - - - - 0.830 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
82. MATR3 ENSGALG00000002478 12793 0.829 - - - - - - - - - 0.829 matrin 3 [Source:NCBI gene;Acc:373948]
83. MB ENSGALG00000012541 260 0.827 - - - - - - - - - 0.827 myoglobin [Source:NCBI gene;Acc:418056]
84. RAB33B ENSGALG00000009790 2340 0.826 - - - - - - - - - 0.826 RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
85. NAPG ENSGALG00000013932 67 0.824 - - - - - - - - - 0.824 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
86. FAM175B 3194 0.823 - - - - - - - - - 0.823 family with sequence similarity 175 member B, transcript variant X2
87. TNFRSF11B ENSGALG00000043167 911 0.822 - - - - - - - - - 0.822 TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
88. CKLF ENSGALG00000005254 3365 0.821 - - - - - - - - - 0.821 chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
89. CRAT ENSGALG00000037443 78 0.817 - - - - - - - - - 0.817 carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
90. KCNH5 ENSGALG00000011858 24 0.816 - - - - 0.816 - - - - - potassium voltage-gated channel subfamily H member 5 [Source:HGNC Symbol;Acc:HGNC:6254]
91. TRAIP ENSGALG00000002908 6901 0.815 - - - - - - - - - 0.815 TRAF interacting protein [Source:NCBI gene;Acc:415927]
92. MFSD2B ENSGALG00000016498 208 0.815 - - - - - - - - - 0.815 major facilitator superfamily domain containing 2B [Source:HGNC Symbol;Acc:HGNC:37207]
93. MPP3 ENSGALG00000042521 1372 0.814 - - - - - - - - - 0.814 membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
94. PTPRJ ENSGALG00000006382 891 0.812 - - - - - - - - - 0.812 protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
95. PTPN2 ENSGALG00000013867 1128 0.811 - - - - - - - - - 0.811 protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
96. THAP9 ENSGALG00000044141 1993 0.81 - - - - - - - - - 0.810 THAP domain containing 9 [Source:HGNC Symbol;Acc:HGNC:23192]
97. ADAM12 ENSGALG00000041255 796 0.806 - - - - - - - - - 0.806 ADAM metallopeptidase domain 12 [Source:NCBI gene;Acc:425843]
98. ENSGALG00000023084 ENSGALG00000023084 10 0.805 - - - - - 0.805 - - - -
99. SYNGR3 ENSGALG00000005589 61 0.805 - - - - - 0.805 - - - - synaptogyrin 3 [Source:NCBI gene;Acc:416548]
100. CD200R1A CD200R1A 105 0.805 - - - - - 0.805 - - - -

There are 123 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA