Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ASF1A

Gene Name Gene ID Reads Annotation
ASF1A ENSGALG00000014887 11319 anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]











Genes with expression patterns similar to ASF1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ASF1A ENSGALG00000014887 11319 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
2. WDR61 ENSGALG00000003221 11352 1.737 - - - - - - 0.827 0.910 - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
3. SURF6 ENSGALG00000038413 11178 1.697 - - - - - - 0.784 0.913 - - surfeit 6 [Source:NCBI gene;Acc:417160]
4. UBE2B ENSGALG00000032664 6069 1.686 - - - - - - 0.767 0.919 - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
5. PES1 ENSGALG00000007778 12248 1.663 - - - - - - 0.753 0.910 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
6. EMC7 ENSGALG00000009637 4969 1.63 - - - - - - 0.720 0.910 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
7. CMPK CMPK 9569 1.625 - - - - - - 0.720 0.905 - -
8. PPP2R5D ENSGALG00000040005 6804 1.617 - - - - - - 0.733 0.884 - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
9. CASK ENSGALG00000042400 8485 1.61 - - - - - - 0.758 0.852 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
10. FPGS ENSGALG00000042460 1749 1.601 - - - - - - 0.708 0.893 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
11. PFDN2 ENSGALG00000026374 22020 1.588 - - - - - - 0.722 0.866 - - prefoldin subunit 2 [Source:HGNC Symbol;Acc:HGNC:8867]
12. DKC1 ENSGALG00000005054 30350 1.52 - - - - - - 0.753 0.767 - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
13. CDC40 ENSGALG00000015061 6118 1.518 - - - - - - 0.742 0.776 - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
14. PSMB2 ENSGALG00000026421 51885 1.51 - - 0.788 - - - 0.722 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
15. SPCS3 ENSGALG00000010839 19106 1.503 - - 0.744 - - - 0.759 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
16. FARSB ENSGALG00000005236 10738 1.495 - - - - - - 0.751 0.744 - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
17. UCHL3 ENSGALG00000016921 16208 1.492 - - - - - - 0.777 - - 0.715 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
18. TMEM184C ENSGALG00000010019 7856 1.454 - - - - - - 0.722 0.732 - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
19. ZNF451 ENSGALG00000016282 3380 1.442 - - 0.715 - - - 0.727 - - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
20. RPF2 ENSGALG00000037087 12788 1.429 - - - - - - 0.725 - - 0.704 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
21. HOXA5 ENSGALG00000025929 6231 1.414 - - - - - - 0.701 - - 0.713 homeobox A5 [Source:NCBI gene;Acc:100858404]
22. FOXK2 ENSGALG00000001577 6346 0.972 - - - - - - - 0.972 - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
23. TLE4 TLE4 7278 0.972 - - - - - - - 0.972 - -
24. GATA6 ENSGALG00000014976 3256 0.961 - - - - - - - 0.961 - - GATA binding protein 6 [Source:NCBI gene;Acc:396390]
25. ACTR3 ENSGALG00000012159 16020 0.956 - - - - - - - 0.956 - - ARP3 actin related protein 3 homolog [Source:NCBI gene;Acc:374197]
26. FDX1 ENSGALG00000026507 2573 0.952 - - - - - - - 0.952 - - ferredoxin 1 [Source:NCBI gene;Acc:373947]
27. BASP1 ENSGALG00000012952 19549 0.951 - - - - - - - 0.951 - - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
28. TBCA ENSGALG00000004353 18510 0.938 - - - - - - - 0.938 - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
29. DEK ENSGALG00000012684 14179 0.92 - - - - - - - 0.920 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
30. POLR2H ENSGALG00000008534 21521 0.915 - - - - - - - 0.915 - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
31. LUC7L2 ENSGALG00000036238 11817 0.913 - - - - - - - 0.913 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
32. ZEB1 ENSGALG00000007260 9277 0.912 - - - - - - - 0.912 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
33. EIF1AY ENSGALG00000016410 6431 0.912 - - - - - - - 0.912 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
34. TBC1D1 ENSGALG00000039380 4423 0.91 - - - - - - - 0.910 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
35. C4orf46 ENSGALG00000009432 3255 0.91 - - - - - - - 0.910 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
36. SDHA ENSGALG00000013167 6509 0.909 - - - - - - - 0.909 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
37. SOX9 ENSGALG00000004386 14802 0.907 - - - - - - - 0.907 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
38. IFT81 ENSGALG00000003854 2534 0.905 - - - - - - - 0.905 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
39. TAB2 ENSGALG00000012356 3467 0.904 - - - - - - - 0.904 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
40. DCTN6 ENSGALG00000010298 7507 0.904 - - - - - - - 0.904 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
41. ATOX1 ENSGALG00000004176 16486 0.904 - - - - - - - 0.904 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
42. ANKRD49 ENSGALG00000017210 3247 0.903 - - - - - - - 0.903 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
43. ARPC5L ENSGALG00000001014 5642 0.903 - - - - - - - 0.903 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
44. WDR92 ENSGALG00000008760 3934 0.903 - - - - - - - 0.903 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
45. BCL2L1 ENSGALG00000006211 2490 0.902 - - - - - - - 0.902 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
46. VPS39 ENSGALG00000008991 4018 0.901 - - - - - - - 0.901 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
47. MED1 ENSGALG00000001708 9556 0.9 - - - - - - - 0.900 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
48. PDS5B ENSGALG00000017070 3998 0.899 - - - - - - - 0.899 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
49. UQCC UQCC 5913 0.897 - - - - - - - 0.897 - -
50. NEK1 ENSGALG00000009683 4305 0.897 - - - - - - - 0.897 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
51. ELP3 ENSGALG00000016624 4483 0.897 - - - - - - - 0.897 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
52. CHEK2 ENSGALG00000005695 1558 0.896 - - - - - - - 0.896 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
53. HEXA ENSGALG00000043828 4789 0.896 - - - - - - - 0.896 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
54. DYNC1LI1 ENSGALG00000011491 11011 0.895 - - - - - - - 0.895 - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
55. PDIA3 ENSGALG00000008348 4982 0.895 - - - - - - - 0.895 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
56. FZD6 ENSGALG00000030626 3336 0.895 - - - - - - - 0.895 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
57. C20ORF7 C20ORF7 2383 0.895 - - - - - - - 0.895 - -
58. XPOT ENSGALG00000009835 2953 0.894 - - - - - - - 0.894 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
59. C28H19ORF10 C28H19ORF10 16529 0.894 - - - - - - - 0.894 - -
60. STXBP3 ENSGALG00000002001 1740 0.894 - - - - - - - 0.894 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
61. EFNB1 ENSGALG00000036539 2706 0.894 - - - - - - - 0.894 - - ephrin B1 [Source:NCBI gene;Acc:395896]
62. LOC776067 ENSGALG00000016808 9164 0.894 - - - - - - 0.894 - - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
63. GTF2H1 ENSGALG00000042340 1553 0.893 - - - - - - - 0.893 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
64. PIK3C2B ENSGALG00000037043 4522 0.893 - - - - - - - 0.893 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
65. FAM69B ENSGALG00000002437 1253 0.891 - - - - - - - 0.891 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
66. C12orf45 C12orf45 2445 0.891 - - - - - - - 0.891 - -
67. DUSP3 ENSGALG00000035369 1790 0.891 - - - - - - - 0.891 - - dual specificity phosphatase 3
68. ERICH1 ENSGALG00000031021 1495 0.891 - - - - - - - 0.891 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
69. RAD21 ENSGALG00000029523 25658 0.891 - - - - - - 0.891 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
70. ADAMTSL1 1479 0.889 - - - - - - - 0.889 - - ADAMTS like 1, transcript variant X3
71. ANKS1B ENSGALG00000011549 440 0.889 - - - - - - - 0.889 - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
72. ERAL1 ENSGALG00000003995 1114 0.889 - - - - - - - 0.889 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]
73. CRADD ENSGALG00000011297 1653 0.889 - - - - - - - 0.889 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
74. FABP3 ENSGALG00000037050 873 0.889 - - - - - - - 0.889 - - fatty acid binding protein 3 [Source:NCBI gene;Acc:419557]
75. PUM2 ENSGALG00000016481 23625 0.888 - - - - - - - 0.888 - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
76. CABIN1 ENSGALG00000006363 4415 0.888 - - - - - - - 0.888 - - calcineurin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:24187]
77. MAP9 ENSGALG00000020253 785 0.888 - - - - - - - 0.888 - - microtubule associated protein 9, transcript variant X7
78. PDE4B ENSGALG00000011094 1871 0.888 - - - - - - - 0.888 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
79. SUCLG1 ENSGALG00000015961 14323 0.886 - - - - - - - 0.886 - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
80. TMPO ENSGALG00000011504 14454 0.88 - - - - - - 0.880 - - - thymopoietin [Source:NCBI gene;Acc:417923]
81. EIF2B EIF2B 28702 0.878 - - - - - - 0.878 - - -
82. MRPL54 ENSGALG00000027611 39450 0.874 - - - - - - 0.874 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
83. PDLIM1 ENSGALG00000005422 3385 0.871 - - - - - - - 0.871 - - PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
84. SMNDC1 ENSGALG00000008561 14415 0.871 - - - - - - - 0.871 - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
85. RPL7L1 ENSGALG00000011974 20292 0.869 - - - - - - 0.869 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
86. LIMD2 ENSGALG00000000529 30617 0.865 - - - - - - 0.865 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
87. RANBP1 ENSGALG00000002107 17715 0.864 - - - - - - 0.864 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
88. PSMD12 ENSGALG00000026225 17473 0.863 - - - - - - 0.863 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
89. XPR1 ENSGALG00000003893 5642 0.861 - - - - - - - 0.861 - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
90. SHISA5 ENSGALG00000004661 8573 0.856 - - - - - - - 0.856 - - shisa family member 5 [Source:NCBI gene;Acc:415948]
91. ACTN1 ENSGALG00000042458 10477 0.855 - - - - - - - 0.855 - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
92. KDM5B ENSGALG00000038948 50645 0.852 - - - - - - 0.852 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
93. MADH2 MADH2 13017 0.852 - - - - - - 0.852 - - -
94. PDZD11 ENSGALG00000004198 11484 0.852 - - - - - - 0.852 - - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
95. SPINT1 ENSGALG00000008469 5735 0.851 - - - - - - - 0.851 - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
96. MIPEP ENSGALG00000017118 8666 0.847 - - - - - - - 0.847 - - mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
97. TIMM17A ENSGALG00000000086 19205 0.845 - - - - - - 0.845 - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:NCBI gene;Acc:421147]
98. TPD52L2 ENSGALG00000004683 13624 0.845 - - - - - - 0.845 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
99. SDF2L1 ENSGALG00000031982 6084 0.843 - - - - - - 0.843 - - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
100. RRP9 ENSGALG00000043359 9747 0.842 - - - - - - 0.842 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]

There are 549 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA