Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARRDC3

Gene Name Gene ID Reads Annotation
ARRDC3 ENSGALG00000025915 1411 arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]











Genes with expression patterns similar to ARRDC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARRDC3 ENSGALG00000025915 1411 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]
2. RASSF8 ENSGALG00000014041 850 1.487 - - - - - - - - 0.765 0.722 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
3. U2SURP ENSGALG00000002612 4255 1.461 - - - - 0.741 - - - - 0.720 U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
4. RIN3 ENSGALG00000010806 729 0.853 - - - - - - - - 0.853 - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
5. F5 ENSGALG00000029298 1850 0.849 - - - - - - - - 0.849 - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
6. MSX2 ENSGALG00000038848 6950 0.837 - - - - - - - - 0.837 - msh homeobox 2 [Source:NCBI gene;Acc:395245]
7. ADAM10 ENSGALG00000004212 568 0.831 - - - - - - - - - 0.831 ADAM metallopeptidase domain 10 [Source:NCBI gene;Acc:374113]
8. TAF1D ENSGALG00000017220 3012 0.824 - - - - - - - - 0.824 - TATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]
9. CEP250 ENSGALG00000026151 163 0.824 - - - - - - - - 0.824 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
10. PDZRN4 ENSGALG00000009530 832 0.823 - - - - - - - - 0.823 - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
11. NTL ENSGALG00000005156 278 0.822 - - - - - - - - 0.822 - neurotrypsin-like, transcript variant X7
12. FUBP1 ENSGALG00000008939 2850 0.822 - - - - - - - - 0.822 - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
13. RAD17 ENSGALG00000015571 1374 0.821 - - - - - - - - 0.821 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
14. TPM4 ENSGALG00000002563 15621 0.821 - - - - - - - - 0.821 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
15. CAMKK1 ENSGALG00000001617 64 0.818 - - - - - - - - 0.818 - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
16. ZEB2 ENSGALG00000040465 315 0.814 - - - - - - - - 0.814 - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
17. CEP112 ENSGALG00000034989 123 0.812 - - - - - - - - 0.812 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
18. CREB5 ENSGALG00000038265 92 0.812 - - - - - - - - 0.812 - cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
19. TOM1L2 ENSGALG00000004902 89 0.811 - - - - - - - - 0.811 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
20. NR2C1 ENSGALG00000011327 5109 0.807 - - - - - - - - 0.807 - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
21. FBXL17 ENSGALG00000000276 2443 0.805 - - - - - - - - - 0.805 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
22. SBNO1 ENSGALG00000003392 6731 0.804 - - - - - - - - - 0.804 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
23. FAM18B1 ENSGALG00000001335 5177 0.802 - - - - - - - - 0.802 - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
24. YBX3 ENSGALG00000031890 819 0.79 - - - - - - - - 0.790 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
25. PHC3 ENSGALG00000009372 157 0.787 - - - - - - - - 0.787 - polyhomeotic homolog 3, transcript variant X8
26. SLC39A10 ENSGALG00000007777 272 0.786 - - - - - - - - 0.786 - solute carrier family 39 member 10 [Source:HGNC Symbol;Acc:HGNC:20861]
27. PLEK2 ENSGALG00000009562 706 0.783 - - - - 0.783 - - - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
28. GNA13 ENSGALG00000036028 9791 0.781 - - - - - - - - - 0.781 G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
29. LUC7L3 ENSGALG00000007386 11944 0.78 - - - - - - - - 0.780 - LUC7 like 3 pre-mRNA splicing factor [Source:NCBI gene;Acc:428677]
30. AKAP13 ENSGALG00000006840 521 0.778 - - - - - - - 0.778 - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
31. NPR3 ENSGALG00000017405 2500 0.778 - - - - - - - - - 0.778 natriuretic peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:7945]
32. SH3TC1 ENSGALG00000015568 484 0.777 - - - - - - - - 0.777 - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
33. ENSGALG00000014190 ENSGALG00000014190 5735 0.777 - - - - - - - - 0.777 -
34. PRDM15 ENSGALG00000019178 2729 0.775 - - - - - - - - 0.775 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
35. ADAMTS19 ENSGALG00000000151 3217 0.775 - - - - - - - - 0.775 - ADAM metallopeptidase with thrombospondin type 1 motif 19 [Source:HGNC Symbol;Acc:HGNC:17111]
36. SH3D19 ENSGALG00000010081 52 0.774 - - - - - - - - 0.774 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
37. MSANTD4 ENSGALG00000017177 3306 0.774 - - - - - - - - 0.774 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
38. EPFIP1L ENSGALG00000007683 18050 0.771 - - - - - - - - 0.771 - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
39. IQCA1 ENSGALG00000003980 87 0.771 - - - - - - - - 0.771 - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
40. TBC1D32 ENSGALG00000014876 681 0.77 - - - - - - - - - 0.770 TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
41. MRPL55 5995 0.77 - - - - 0.770 - - - - - mitochondrial ribosomal protein L55
42. ANKRD50 ENSGALG00000011831 2870 0.769 - - - - - - - - 0.769 - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
43. ZNF395 ENSGALG00000034140 1868 0.768 - - - - - - - 0.768 - - zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
44. SGOL1 SGOL1 3919 0.767 - - - - 0.767 - - - - -
45. PRKCH ENSGALG00000011889 326 0.766 - - - - - - 0.766 - - - protein kinase C eta, transcript variant X1
46. IGF1R ENSGALG00000040651 772 0.765 - - - - - - - - 0.765 - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
47. COL13A1 ENSGALG00000004286 957 0.765 - - - - - - - - 0.765 - collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]
48. BACH1 ENSGALG00000015828 114 0.765 - - - - - - - - 0.765 - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
49. CAMK4 ENSGALG00000000244 151 0.764 - - - - - - - - 0.764 - calcium/calmodulin dependent protein kinase IV [Source:NCBI gene;Acc:723973]
50. EP3 EP3 741 0.764 - - - - - - - - - 0.764
51. GARNL3 ENSGALG00000000847 3423 0.763 - - - - - - - - - 0.763 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
52. HEPH ENSGALG00000037410 640 0.763 - - - - - - - - 0.763 - hephaestin [Source:HGNC Symbol;Acc:HGNC:4866]
53. DDRGK1 ENSGALG00000016003 9098 0.763 - - - - - - - - 0.763 - DDRGK domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16110]
54. ANAPC1 ENSGALG00000008254 2519 0.761 - - - - - - - - - 0.761 anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
55. VPS36 ENSGALG00000017026 3658 0.761 - - - - - - - - 0.761 - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
56. PCNX PCNX 110 0.761 - - - - - - - - 0.761 -
57. VPRBP VPRBP 4037 0.761 - - - - - - - - - 0.761
58. TTPAL ENSGALG00000004244 2734 0.759 - - - - - - - - 0.759 - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
59. SERINC2 ENSGALG00000021685 1581 0.758 - - - - - - - - 0.758 - serine incorporator 2 [Source:NCBI gene;Acc:419558]
60. RAB11FIP2 ENSGALG00000009304 913 0.758 - - - - - - - - - 0.758 RAB11 family interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29152]
61. TTC3 ENSGALG00000016050 4115 0.757 - - - - - - - - - 0.757 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
62. VOPP1 ENSGALG00000042773 771 0.757 - - - - - - - - - 0.757 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
63. AFG3L2 ENSGALG00000013853 1138 0.757 - - - - - - - - 0.757 - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
64. CAMLG ENSGALG00000006411 662 0.757 - - - - 0.757 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
65. ARPC2 ENSGALG00000011452 7338 0.757 - - - - - - - - 0.757 - actin related protein 2/3 complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:705]
66. LRP5 ENSGALG00000029533 385 0.756 - - - - - - - - - 0.756 LDL receptor related protein 5 [Source:NCBI gene;Acc:423114]
67. DENND1A ENSGALG00000001157 503 0.756 - - - - - - - - - 0.756 DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
68. ACOX1 ENSGALG00000002159 2953 0.755 - - - - - - - - - 0.755 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
69. PSMD2 ENSGALG00000006294 6805 0.755 - - - - - - - 0.755 - - proteasome 26S subunit, non-ATPase 2 [Source:NCBI gene;Acc:425294]
70. PRR11 2624 0.755 - - - - - - - - - 0.755 proline rich 11, transcript variant X8
71. STOML1 ENSGALG00000001470 472 0.755 - - - - - - - - 0.755 - stomatin like 1 [Source:NCBI gene;Acc:415303]
72. TRMT44 ENSGALG00000015594 1490 0.755 - - - - - - - - - 0.755 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
73. EXOSC1 ENSGALG00000039917 5259 0.755 - - - - - - 0.755 - - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
74. ODZ2 ODZ2 1380 0.754 - - - - - - - - 0.754 -
75. SCHIP1 ENSGALG00000039468 5912 0.753 - - - - - - - - 0.753 - schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]
76. SLC45A3 ENSGALG00000000703 85 0.753 - - - - - - - - 0.753 - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
77. AK6 ENSGALG00000020534 4791 0.753 - - - - - - - - - 0.753 adenylate kinase 6 [Source:NCBI gene;Acc:425215]
78. C15orf27 C15orf27 1206 0.752 - - - - - - 0.752 - - -
79. CLPTM1L ENSGALG00000013187 9733 0.751 - - - - - - - - - 0.751 CLPTM1 like [Source:NCBI gene;Acc:420973]
80. MN1 ENSGALG00000026119 1808 0.751 - - - - - - - - 0.751 - MN1 proto-oncogene, transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:7180]
81. FOXP1 127 0.75 - - - - - - - - - 0.750 forkhead box P1, transcript variant X14
82. ENSGALG00000006730 ENSGALG00000006730 3695 0.749 - - - - - - - - 0.749 -
83. LHCGR ENSGALG00000009095 174 0.749 - - - - - - - - 0.749 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
84. CDA ENSGALG00000007382 1544 0.749 - - - - - - - - 0.749 - cytidine deaminase [Source:NCBI gene;Acc:771849]
85. ITPR2 ENSGALG00000014071 932 0.749 - - - - - - - - 0.749 - inositol 1,4,5-trisphosphate receptor type 2 [Source:HGNC Symbol;Acc:HGNC:6181]
86. MFSD2A ENSGALG00000003879 5455 0.748 - - - - - - - - 0.748 - major facilitator superfamily domain containing 2A [Source:HGNC Symbol;Acc:HGNC:25897]
87. FBXL2 ENSGALG00000030175 157 0.748 - - - - - - - - - 0.748 F-box and leucine rich repeat protein 2 [Source:HGNC Symbol;Acc:HGNC:13598]
88. SOSTDC1 ENSGALG00000036836 1081 0.748 - - - - - - - - - 0.748 sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
89. CTK-1 CTK-1 1618 0.748 - - - - - - - - - 0.748
90. ENSGALG00000026919 ENSGALG00000026919 301 0.747 - - - - - - - - 0.747 -
91. C1orf50 ENSGALG00000004800 4894 0.747 - - - - - - 0.747 - - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
92. FAM120B ENSGALG00000011180 101 0.747 - - - - - - - - 0.747 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
93. SLTM ENSGALG00000004192 3244 0.747 - - - - - - - - 0.747 - SAFB like transcription modulator [Source:HGNC Symbol;Acc:HGNC:20709]
94. ENSGALG00000004643 ENSGALG00000004643 2297 0.746 - - - - - - - - - 0.746
95. NUP155 ENSGALG00000003688 1237 0.745 - - - - - - - - 0.745 - nucleoporin 155 [Source:HGNC Symbol;Acc:HGNC:8063]
96. RPRD2 ENSGALG00000014656 939 0.745 - - - - - - - - - 0.745 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
97. SMU1 ENSGALG00000002014 8136 0.745 - - - - 0.745 - - - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
98. PCLO 249 0.745 - - - - - - - - 0.745 - piccolo presynaptic cytomatrix protein
99. ZDHHC7 ENSGALG00000042522 1774 0.745 - - - - - - - - 0.745 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
100. TRAPPC4 ENSGALG00000007707 3568 0.744 - - - - 0.744 - - - - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA