Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARPC1B

Gene Name Gene ID Reads Annotation
ARPC1B ENSGALG00000032588 2407 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]











Genes with expression patterns similar to ARPC1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARPC1B ENSGALG00000032588 2407 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
2. PROM1 ENSGALG00000014496 2494 1.734 - - - - - - 0.754 - - 0.980 prominin 1 [Source:NCBI gene;Acc:422825]
3. HAUS8 ENSGALG00000003727 351 1.711 - - - - - - 0.742 - - 0.969 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
4. PTX3 ENSGALG00000028284 2984 1.702 - - - - - - 0.725 - - 0.977 pentraxin 3 [Source:NCBI gene;Acc:548626]
5. RTN4R ENSGALG00000007732 1515 1.695 - - - - - - 0.717 - - 0.978 reticulon 4 receptor
6. TMEM128 ENSGALG00000014992 6567 1.657 - - - - - - - - 0.713 0.944 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
7. KIAA1551 ENSGALG00000045168 3435 1.633 - - - - - - - - 0.710 0.923 KIAA1551, transcript variant X1
8. ECI2 ENSGALG00000012809 3692 1.623 - - - - - - - - 0.727 0.896 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
9. SEC14L1 ENSGALG00000001684 2776 1.615 - - - - - - - 0.722 - 0.893 SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
10. PEX2 ENSGALG00000035752 4427 1.58 - - - - - - - 0.724 - 0.856 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
11. MMRN2 770 1.57 - - - - - - 0.769 - 0.801 - multimerin 2, transcript variant X1
12. PAK2 ENSGALG00000006426 283 1.484 - - - - - - - 0.734 0.750 - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
13. MMP15 ENSGALG00000038758 49988 1.48 - - - - - - 0.778 - 0.702 - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
14. EDN3 ENSGALG00000040880 1061 1.473 - - - - - - 0.721 - 0.752 - endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]
15. RB1CC1 ENSGALG00000015259 4211 1.467 - - - - - - 0.736 0.731 - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
16. TBX3 ENSGALG00000036043 2888 1.466 - - - - - - 0.720 - - 0.746 T-box 3 [Source:NCBI gene;Acc:374202]
17. ASB13 ENSGALG00000008401 181 1.451 - - - - - - 0.715 0.736 - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
18. LBP ENSGALG00000006756 1684 1.449 - - 0.737 - - - - - 0.712 - lipopolysaccharide binding protein, transcript variant X1
19. ARID3A ENSGALG00000026231 867 1.448 - - - - - - - 0.745 0.703 - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
20. NHP2 ENSGALG00000033666 17253 1.446 - - - - - - 0.733 - - 0.713 NHP2 ribonucleoprotein [Source:NCBI gene;Acc:416218]
21. HAPLN1 ENSGALG00000015627 14942 1.432 - - - - 0.717 - 0.715 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
22. DMD ENSGALG00000016281 5657 1.429 - - - - - - - 0.709 - 0.720 dystrophin [Source:NCBI gene;Acc:396236]
23. ENSGALG00000005389 ENSGALG00000005389 553 0.984 - - - - - - - - - 0.984
24. CPNE1 ENSGALG00000040856 610 0.979 - - - - - - - - - 0.979 copine 1 [Source:NCBI gene;Acc:419134]
25. FASTKD3 ENSGALG00000033521 1186 0.979 - - - - - - - - - 0.979 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
26. GRTP1 ENSGALG00000016828 3145 0.979 - - - - - - - - - 0.979 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
27. SOX6 ENSGALG00000006074 102 0.979 - - - - - - - - - 0.979 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
28. SLC2A3 SLC2A3 527 0.978 - - - - - - - - - 0.978
29. 5S_2 5S_2 58 0.978 - - - - - - - - - 0.978
30. CRYM ENSGALG00000002484 3558 0.978 - - - - - - - - - 0.978 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
31. IL10R2 IL10R2 72 0.978 - - - - - - - - - 0.978
32. PREX2 ENSGALG00000042354 134 0.977 - - - - - - - - - 0.977 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
33. CPNE2 ENSGALG00000001316 236 0.977 - - - - - - - - - 0.977 copine 2 [Source:NCBI gene;Acc:415646]
34. ZNF6 ZNF6 138 0.977 - - - - - - - - - 0.977
35. ITSN2 ENSGALG00000016504 651 0.976 - - - - - - - - - 0.976 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
36. CXADR ENSGALG00000015701 96 0.976 - - - - - - - - - 0.976 coxsackie virus and adenovirus receptor, transcript variant X2
37. APBA3 ENSGALG00000000740 1249 0.976 - - - - - - - - - 0.976 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
38. PCLO 249 0.976 - - - - - - - - - 0.976 piccolo presynaptic cytomatrix protein
39. FAM190B FAM190B 165 0.976 - - - - - - - - - 0.976
40. LRRN4 ENSGALG00000008815 481 0.976 - - - - - - - - - 0.976 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
41. DIAPH3 ENSGALG00000016937 1069 0.975 - - - - - - - - - 0.975 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
42. PDPN ENSGALG00000030096 647 0.975 - - - - - - - - - 0.975 podoplanin, transcript variant X4
43. WDSUB1 ENSGALG00000012574 2038 0.975 - - - - - - - - - 0.975 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
44. SSH1 ENSGALG00000004928 222 0.975 - - - - - - - - - 0.975 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
45. TP53BP1 ENSGALG00000042201 708 0.975 - - - - - - - - - 0.975 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
46. AURKA ENSGALG00000007768 793 0.974 - - - - - - - - - 0.974 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
47. MTSS1 ENSGALG00000041969 1312 0.974 - - - - - - - - - 0.974 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
48. PM20D2 ENSGALG00000015779 1301 0.974 - - - - - - - - - 0.974 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
49. CASKIN1 604 0.974 - - - - - - - - - 0.974 CASK interacting protein 1, transcript variant X4
50. C14orf80 C14orf80 1921 0.973 - - - - - - - - - 0.973
51. ITGA9 ENSGALG00000029378 415 0.973 - - - - - - - - - 0.973 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
52. CPT2 ENSGALG00000010681 3211 0.973 - - - - - - - - - 0.973 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
53. C10orf118 C10orf118 762 0.972 - - - - - - - - - 0.972
54. CNTRL ENSGALG00000001513 1773 0.972 - - - - - - - - - 0.972 centriolin [Source:NCBI gene;Acc:417121]
55. FAM129A ENSGALG00000004812 269 0.972 - - - - - - - - - 0.972 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
56. SLC39A13 ENSGALG00000008122 2003 0.972 - - - - - - - - - 0.972 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
57. TANGO2 ENSGALG00000002056 1971 0.971 - - - - - - - - - 0.971 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
58. FSTL4 ENSGALG00000031487 529 0.971 - - - - - - - - - 0.971 follistatin like 4 [Source:NCBI gene;Acc:395163]
59. ARHGAP21 ENSGALG00000007721 3961 0.971 - - - - - - - - - 0.971 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
60. GRK4 ENSGALG00000015645 1065 0.971 - - - - - - - - - 0.971 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
61. MSI1 ENSGALG00000007227 2279 0.97 - - - - - - - - - 0.970 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
62. CDH1-A CDH1-A 343 0.97 - - - - - - - - - 0.970
63. RER1 ENSGALG00000021683 9074 0.97 - - - - - - - - - 0.970 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
64. MGA 1911 0.969 - - - - - - - - - 0.969 MGA, MAX dimerization protein, transcript variant X15
65. MRPL50 ENSGALG00000015543 11649 0.968 - - - - - - - - - 0.968 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
66. FBXO38 ENSGALG00000038627 2658 0.968 - - - - - - - - - 0.968 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
67. HEXA ENSGALG00000043828 4789 0.968 - - - - - - - - - 0.968 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
68. AGGF1 ENSGALG00000004311 3011 0.967 - - - - - - - - - 0.967 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
69. KLHL7 ENSGALG00000010938 528 0.967 - - - - - - - - - 0.967 kelch like family member 7 [Source:NCBI gene;Acc:420612]
70. FREM3 ENSGALG00000020561 1824 0.967 - - - - - - - - - 0.967 FRAS1 related extracellular matrix 3
71. TBC1D19 ENSGALG00000029673 1868 0.967 - - - - - - - - - 0.967 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
72. BRD1 ENSGALG00000029379 6047 0.967 - - - - - - - - - 0.967 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
73. NARS ENSGALG00000040506 9506 0.967 - - - - - - - - - 0.967 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
74. TMEM130 ENSGALG00000003569 949 0.967 - - - - - - - - - 0.967 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
75. SGSH ENSGALG00000007027 1115 0.967 - - - - - - - - - 0.967 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
76. INTS10 ENSGALG00000010130 6320 0.966 - - - - - - - - - 0.966 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
77. HYAL3 ENSGALG00000029000 712 0.965 - - - - - - - - - 0.965 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
78. SSR2 ENSGALG00000000764 32190 0.965 - - - - - - - - - 0.965 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
79. TMEM237 ENSGALG00000008381 1317 0.965 - - - - - - - - - 0.965 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
80. WHSC1 1712 0.965 - - - - - - - - - 0.965 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
81. C26H6ORF89 C26H6ORF89 1826 0.964 - - - - - - - - - 0.964
82. SPDL1 ENSGALG00000001942 4403 0.964 - - - - - - - - - 0.964 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
83. ZFR ENSGALG00000003235 8466 0.964 - - - - - - - - - 0.964 zinc finger RNA binding protein, transcript variant X3
84. PLA2G15 ENSGALG00000041787 762 0.963 - - - - - - - - - 0.963 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
85. IDS ENSGALG00000009154 1177 0.963 - - - - - - - - - 0.963 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
86. RWDD2B ENSGALG00000015807 3601 0.963 - - - - - - - - - 0.963 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
87. LPCAT2 ENSGALG00000003574 893 0.963 - - - - - - - - - 0.963 lysophosphatidylcholine acyltransferase 2 [Source:NCBI gene;Acc:415716]
88. CCDC51 ENSGALG00000006465 1845 0.962 - - - - - - - - - 0.962 coiled-coil domain containing 51, transcript variant X1
89. TMEM68 ENSGALG00000031835 1691 0.961 - - - - - - - - - 0.961 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
90. ASB3 ENSGALG00000008176 5422 0.961 - - - - - - - - - 0.961 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
91. FRMD3 ENSGALG00000012577 999 0.96 - - - - - - - - - 0.960 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
92. CCT8 ENSGALG00000015821 12161 0.959 - - - - - - - - - 0.959 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
93. MPRIP ENSGALG00000004798 6700 0.959 - - - - - - - - - 0.959 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
94. ESRRG ENSGALG00000009645 2783 0.959 - - - - - - - - - 0.959 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
95. ENSGALG00000009044 ENSGALG00000009044 14492 0.958 - - - - - - - - - 0.958
96. ASAP2 ENSGALG00000016419 1393 0.958 - - - - - - - - - 0.958 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
97. MYH1D ENSGALG00000027323 365 0.958 - - - - - - - - - 0.958 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
98. PPM1E ENSGALG00000005061 2606 0.958 - - - - - - - - - 0.958 protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
99. FBXO21 ENSGALG00000008201 2608 0.958 - - - - - - - - - 0.958 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
100. RHOT1 ENSGALG00000003397 5149 0.958 - - - - - - - - - 0.958 ras homolog family member T1 [Source:NCBI gene;Acc:417410]

There are 708 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA