Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARPC1A

Gene Name Gene ID Reads Annotation
ARPC1A ENSGALG00000004693 11583 actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]











Genes with expression patterns similar to ARPC1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARPC1A ENSGALG00000004693 11583 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
2. UFD1L 12964 2.411 - - - - 0.711 - 0.855 - - 0.845 ubiquitin fusion degradation 1 like (yeast)
3. MOSPD1 ENSGALG00000006132 8503 2.395 - - - 0.790 0.733 - 0.872 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
4. ERBB2IP ERBB2IP 5800 2.248 - - - 0.788 - - 0.724 - - 0.736
5. CCNI ENSGALG00000011457 3203 1.692 - - - 0.808 - - - - - 0.884 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
6. SUV39H2 ENSGALG00000013920 4360 1.627 - - - - - - 0.848 - - 0.779 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
7. CHM ENSGALG00000006906 4953 1.622 - - 0.818 0.804 - - - - - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
8. SSR2 ENSGALG00000000764 32190 1.615 - - - 0.827 - - - - - 0.788 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
9. NXN 20202 1.611 - - 0.732 - - - 0.879 - - - nucleoredoxin, transcript variant X1
10. SLC25A3 ENSGALG00000011514 62606 1.608 - - - 0.786 - - 0.822 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
11. ZFR ENSGALG00000003235 8466 1.605 - - - - - - 0.886 - - 0.719 zinc finger RNA binding protein, transcript variant X3
12. BTG1L ENSGALG00000004676 2293 1.587 - - - 0.814 - - - - - 0.773 protein BTG1-like
13. C1orf198 ENSGALG00000026600 5651 1.585 - - - - - - 0.816 - - 0.769 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
14. TRAPPC12 ENSGALG00000016387 2593 1.577 - - - 0.744 - - - - - 0.833 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
15. GTPBP4 ENSGALG00000006703 16183 1.573 - - - - - - 0.802 - - 0.771 GTP binding protein 4 [Source:NCBI gene;Acc:420458]
16. MAGT1 ENSGALG00000007861 9105 1.569 - - - - - - 0.855 0.714 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
17. GLRX3 ENSGALG00000010464 22578 1.567 - - - 0.757 - - 0.810 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
18. PNRC2 ENSGALG00000004122 19228 1.566 - - - - - - 0.826 - - 0.740 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
19. CACYBP ENSGALG00000004554 7320 1.565 - - - 0.772 - - 0.793 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
20. SCFD1 ENSGALG00000009916 5756 1.559 - - - - 0.752 - 0.807 - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
21. SMU1 ENSGALG00000002014 8136 1.557 - - - - 0.717 - 0.840 - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
22. GTSE1 ENSGALG00000004897 2865 1.552 - - 0.736 - - - - - - 0.816 G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
23. USMG5 ENSGALG00000034645 33263 1.549 - - - - - - - 0.739 - 0.810 up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
24. HIPK3 ENSGALG00000011695 6842 1.544 - - - - - - 0.737 - - 0.807 homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
25. PPP1CC ENSGALG00000004571 14748 1.542 - - - - 0.754 - 0.788 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
26. TRIM33 ENSGALG00000001976 7404 1.54 - - - 0.785 - - 0.755 - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
27. ITGA9 ENSGALG00000029378 415 1.538 - - - 0.800 - - - - - 0.738 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
28. CETN1 ENSGALG00000026741 7243 1.537 - - - - - - 0.785 - - 0.752 centrin 1 [Source:NCBI gene;Acc:422668]
29. KIF3A ENSGALG00000006860 6209 1.537 - - - - 0.765 - - 0.772 - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
30. EBAG9 ENSGALG00000036293 10058 1.532 - - - - - - 0.792 - - 0.740 estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
31. MTDH ENSGALG00000034050 9525 1.529 - - - - - - 0.712 - - 0.817 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
32. SPEN ENSGALG00000036932 9688 1.525 - - - - - - 0.735 0.790 - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
33. RNF219 ENSGALG00000016911 4458 1.523 - - - - - - 0.818 - - 0.705 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
34. UTP18 ENSGALG00000002985 7129 1.521 - - - 0.790 0.731 - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
35. NDUFB4 ENSGALG00000027688 8951 1.515 - - - - - - 0.775 0.740 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
36. RBM15B 5416 1.515 - - - - - - 0.757 0.758 - - RNA binding motif protein 15B
37. ACO2 ENSGALG00000011950 30387 1.512 - - - - - - 0.747 - - 0.765 aconitase 2 [Source:NCBI gene;Acc:374009]
38. PSMA2 ENSGALG00000039387 23620 1.51 - - - 0.708 - - 0.802 - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
39. COMMD7 ENSGALG00000006630 11491 1.508 - - - 0.723 - - - - - 0.785 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
40. MPRIP ENSGALG00000004798 6700 1.506 - - - - - - 0.788 - - 0.718 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
41. CANX ENSGALG00000032148 11297 1.504 - - - 0.773 - - 0.731 - - - calnexin [Source:NCBI gene;Acc:416288]
42. TIMM17A ENSGALG00000000086 19205 1.503 - - - - 0.718 - 0.785 - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:NCBI gene;Acc:421147]
43. SLC25A17 ENSGALG00000012013 13948 1.5 - - - 0.702 - - 0.798 - - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
44. EIF3I ENSGALG00000003337 28832 1.495 - - - - - - 0.704 0.791 - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
45. PTX3 ENSGALG00000028284 2984 1.495 - - - - 0.747 - - - - 0.748 pentraxin 3 [Source:NCBI gene;Acc:548626]
46. CHCHD3 ENSGALG00000006489 18592 1.493 - - - 0.760 - - 0.733 - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
47. IGDCC4 ENSGALG00000007410 5457 1.489 - - - 0.740 - - 0.749 - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
48. FLCN ENSGALG00000004816 4101 1.478 - - - - 0.713 - 0.765 - - - folliculin, transcript variant X1
49. TMEM184C ENSGALG00000010019 7856 1.476 - - - - - - 0.755 - - 0.721 transmembrane protein 184C [Source:NCBI gene;Acc:422469]
50. ZNHIT3 ENSGALG00000026031 8652 1.471 - - - - - - 0.703 0.768 - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
51. RIOK3 ENSGALG00000015004 4249 1.463 - - - - 0.750 - 0.713 - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
52. ABCD2 ENSGALG00000042554 1607 1.462 - - - 0.732 0.730 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
53. INTS10 ENSGALG00000010130 6320 1.462 - - - 0.742 - - - - - 0.720 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
54. SAFB2 ENSGALG00000001948 10238 1.461 - - - - 0.742 - 0.719 - - - scaffold attachment factor B2, transcript variant X6
55. HERC2 ENSGALG00000016739 9900 1.459 - - - 0.747 - - 0.712 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
56. RRAGC ENSGALG00000033079 4966 1.458 - - - - 0.731 - - - - 0.727 Ras related GTP binding C [Source:NCBI gene;Acc:419605]
57. WDSUB1 ENSGALG00000012574 2038 1.442 - - - 0.720 - - - - - 0.722 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
58. CTBP1 ENSGALG00000039942 9383 1.441 - - - - 0.706 - 0.735 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
59. ZCCHC2 ENSGALG00000012889 3163 1.44 - - - 0.727 - - 0.713 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
60. TTC37 ENSGALG00000014670 5715 1.439 - - - - - - 0.725 0.714 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
61. PDIA5 ENSGALG00000011689 6913 1.439 - - - - 0.723 - - - - 0.716 protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
62. TRAPPC4 ENSGALG00000007707 3568 1.434 - - - - 0.714 - 0.720 - - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
63. CSE1L ENSGALG00000004707 20653 1.423 - - - - - - 0.700 0.723 - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
64. ADAR ENSGALG00000021475 6004 1.416 - - - 0.702 0.714 - - - - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
65. KCNK5 ENSGALG00000034077 3233 1.415 - - 0.701 0.714 - - - - - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
66. CAP1 ENSGALG00000036294 18598 0.914 - - - - - - 0.914 - - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
67. CCDC66 ENSGALG00000005450 1262 0.901 - - - - - - - - - 0.901 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
68. CPSF6 ENSGALG00000019355 7634 0.899 - - - - - - 0.899 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
69. KLC1 ENSGALG00000011528 1621 0.898 - - - - - - - - - 0.898 kinesin light chain 1, transcript variant X6
70. SRSF6 ENSGALG00000000990 12424 0.897 - - - - - - 0.897 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
71. RAD21 ENSGALG00000029523 25658 0.893 - - - - - - 0.893 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
72. VWA9 ENSGALG00000007491 4790 0.893 - - - - - - - - - 0.893 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
73. WDR61 ENSGALG00000003221 11352 0.892 - - - - - - 0.892 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
74. KIDINS220 ENSGALG00000016409 854 0.89 - - - - - - - - - 0.890 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
75. TOMM20 ENSGALG00000035299 23431 0.889 - - - - - - 0.889 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
76. LEPROT ENSGALG00000011047 7132 0.888 - - - - - - 0.888 - - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
77. XPO1 ENSGALG00000029476 9526 0.886 - - - - - - 0.886 - - - exportin 1 [Source:NCBI gene;Acc:421192]
78. KDM5B ENSGALG00000038948 50645 0.885 - - - - - - 0.885 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
79. MFSD1 ENSGALG00000009593 3116 0.885 - - - - - - - - - 0.885 major facilitator superfamily domain containing 1 [Source:NCBI gene;Acc:425017]
80. SH3BP2 ENSGALG00000015665 431 0.884 - - - - - - - - - 0.884 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
81. MCTS1 ENSGALG00000008517 27514 0.877 - - - - - - 0.877 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
82. SPATA20 ENSGALG00000006857 3506 0.877 - - - - - - - - - 0.877 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
83. SPERT ENSGALG00000016981 145 0.874 - - - - - - - - - 0.874 spermatid associated [Source:NCBI gene;Acc:418848]
84. SRRM1 ENSGALG00000001283 23820 0.874 - - - - - - 0.874 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
85. RAD23B ENSGALG00000015540 10828 0.874 - - - - - - 0.874 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
86. DTYMK ENSGALG00000006305 11736 0.873 - - - - - - 0.873 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
87. TPD52L2 ENSGALG00000004683 13624 0.872 - - - - - - 0.872 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
88. DYNC1H1 ENSGALG00000011330 16400 0.869 - - - - - - 0.869 - - - dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
89. C9orf89 C9orf89 3056 0.869 - - - - - - - - - 0.869
90. BRT-1 BRT-1 26083 0.868 - - - - - - - - - 0.868
91. PM20D1 ENSGALG00000000724 2108 0.868 - - - 0.868 - - - - - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
92. CUL5 ENSGALG00000017165 2480 0.868 - - - - - - - - - 0.868 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
93. ARID1B ENSGALG00000013683 3397 0.867 - - - - - - - - - 0.867 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
94. SNORA31 SNORA31 183 0.867 - - - 0.867 - - - - - -
95. RRP9 ENSGALG00000043359 9747 0.867 - - - - - - 0.867 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
96. CHMP4B ENSGALG00000002095 17422 0.865 - - - - - - - - - 0.865 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
97. HELLS ENSGALG00000005451 7094 0.864 - - - - - - - - - 0.864 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
98. TLK1 ENSGALG00000009569 5446 0.864 - - - - - - 0.864 - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
99. LYPLA1 ENSGALG00000040421 14720 0.863 - - - - - - 0.863 - - - lysophospholipase I [Source:HGNC Symbol;Acc:HGNC:6737]
100. MRPS18A ENSGALG00000010296 11039 0.862 - - - - - - 0.862 - - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]

There are 795 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA