Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ARID5B

Gene Name Gene ID Reads Annotation
ARID5B ENSGALG00000031534 392 AT-rich interaction domain 5B [Source:NCBI gene;Acc:423661]











Genes with expression patterns similar to ARID5B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARID5B ENSGALG00000031534 392 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AT-rich interaction domain 5B [Source:NCBI gene;Acc:423661]
2. PTPRQ ENSGALG00000010935 626 1.575 - - 0.806 0.769 - - - - - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
3. SENP7 ENSGALG00000044642 48 1.478 - - 0.734 - - - - - - 0.744 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
4. STAT4 ENSGALG00000033087 7 0.835 - - 0.835 - - - - - - - signal transducer and activator of transcription 4 [Source:NCBI gene;Acc:768406]
5. MRS2 ENSGALG00000040084 454 0.834 - - - - - - - - - 0.834 MRS2, magnesium transporter [Source:HGNC Symbol;Acc:HGNC:13785]
6. FAM175B 3194 0.832 - - - - - - - - - 0.832 family with sequence similarity 175 member B, transcript variant X2
7. RUNX2 ENSGALG00000040276 499 0.83 - - 0.830 - - - - - - - runt related transcription factor 2 [Source:NCBI gene;Acc:373919]
8. EPAS1 ENSGALG00000010005 14 0.827 - - 0.827 - - - - - - - endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
9. COQ2 ENSGALG00000041294 25 0.827 - - - - - - - - - 0.827 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
10. TRPC3 ENSGALG00000011875 9 0.823 - - 0.823 - - - - - - - transient receptor potential cation channel subfamily C member 3 [Source:NCBI gene;Acc:374153]
11. LOC112533211 ENSGALG00000002102 1 0.823 - - 0.823 - - - - - - - uncharacterized LOC112533211
12. ENSGALG00000019367 ENSGALG00000019367 2 0.823 - - 0.823 - - - - - - -
13. GFRAL ENSGALG00000016296 4 0.823 - - 0.823 - - - - - - - GDNF family receptor alpha like [Source:HGNC Symbol;Acc:HGNC:32789]
14. PLGL ENSGALG00000028886 3 0.823 - - 0.823 - - - - - - - plasminogen-like
15. LACC1 ENSGALG00000016969 1 0.823 - - 0.823 - - - - - - - LACC1 laccase domain containing 1, transcript variant X6
16. C14orf166B C14orf166B 4 0.823 - - 0.823 - - - - - - -
17. CD28 ENSGALG00000008669 2 0.823 - - 0.823 - - - - - - - CD28 molecule [Source:NCBI gene;Acc:396249]
18. PRSS3 ENSGALG00000039545 1 0.823 - - 0.823 - - - - - - - protease, serine 3 [Source:NCBI gene;Acc:396345]
19. GHRHR-LR ENSGALG00000005242 2 0.823 - - 0.823 - - - - - - - growth-hormone releasing hormone-like peptide receptor
20. ENSGALG00000000979 ENSGALG00000000979 3 0.823 - - 0.823 - - - - - - -
21. ENSGALG00000015104 ENSGALG00000015104 1 0.823 - - 0.823 - - - - - - -
22. ZBTB44 ENSGALG00000001341 3 0.823 - - 0.823 - - - - - - - zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
23. VILL ENSGALG00000005763 4 0.823 - - 0.823 - - - - - - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
24. ENSGALG00000028428 ENSGALG00000028428 3 0.823 - - 0.823 - - - - - - -
25. MSMB ENSGALG00000043909 1 0.823 - - 0.823 - - - - - - - microseminoprotein, beta-
26. NOX2 NOX2 2 0.823 - - 0.823 - - - - - - -
27. ZAN ZAN 2 0.823 - - 0.823 - - - - - - -
28. KNG1 ENSGALG00000046159 17 0.823 - - 0.823 - - - - - - - kininogen 1 [Source:HGNC Symbol;Acc:HGNC:6383]
29. WIPF3 ENSGALG00000011170 2 0.823 - - 0.823 - - - - - - - WAS/WASL interacting protein family member 3 [Source:HGNC Symbol;Acc:HGNC:22004]
30. PLAGL2 ENSGALG00000006586 3 0.823 - - 0.823 - - - - - - - PLAG1 like zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:9047]
31. LOC427654 ENSGALG00000021286 1 0.823 - - 0.823 - - - - - - - parvalbumin beta-like, transcript variant X2
32. CAD19 CAD19 17 0.823 - - 0.823 - - - - - - -
33. LOC415478 ENSGALG00000021171 100 0.823 - - 0.823 - - - - - - - transmembrane protein 2-like, transcript variant X2
34. GHRHR ENSGALG00000005212 1 0.823 - - 0.823 - - - - - - - growth hormone releasing hormone receptor [Source:NCBI gene;Acc:420385]
35. PGBD5 ENSGALG00000011111 1 0.823 - - 0.823 - - - - - - - piggyBac transposable element derived 5 [Source:HGNC Symbol;Acc:HGNC:19405]
36. ITIH5 ENSGALG00000006891 2 0.823 - - 0.823 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family member 5 [Source:HGNC Symbol;Acc:HGNC:21449]
37. CNTFR ENSGALG00000028140 2 0.823 - - 0.823 - - - - - - - ciliary neurotrophic factor receptor [Source:NCBI gene;Acc:395885]
38. MYH1B ENSGALG00000039977 3 0.823 - - 0.823 - - - - - - - myosin, heavy chain 1B, skeletal muscle [Source:NCBI gene;Acc:374069]
39. EXOC6B ENSGALG00000016098 3 0.823 - - 0.823 - - - - - - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
40. CASKIN2 ENSGALG00000008034 3 0.823 - - 0.823 - - - - - - - CASK interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:18200]
41. GPR83 ENSGALG00000017212 6 0.823 - - 0.823 - - - - - - - G protein-coupled receptor 83 [Source:NCBI gene;Acc:428093]
42. ENSGALG00000001629 ENSGALG00000001629 31 0.823 - - 0.823 - - - - - - -
43. SGCD ENSGALG00000003886 27 0.823 - - 0.823 - - - - - - - sarcoglycan delta [Source:HGNC Symbol;Acc:HGNC:10807]
44. ENSGALG00000026109 ENSGALG00000026109 2 0.823 - - 0.823 - - - - - - -
45. IP3KA IP3KA 4 0.823 - - 0.823 - - - - - - -
46. AGPAT4 ENSGALG00000011571 4 0.823 - - 0.823 - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:20885]
47. COL20A1 ENSGALG00000005797 1 0.823 - - 0.823 - - - - - - - collagen type XX alpha 1 chain [Source:NCBI gene;Acc:419243]
48. SIX2 ENSGALG00000023303 2 0.823 - - 0.823 - - - - - - - SIX homeobox 2 [Source:NCBI gene;Acc:724086]
49. ENSGALG00000028021 ENSGALG00000028021 1 0.823 - - 0.823 - - - - - - -
50. ILDR2 ENSGALG00000015458 16 0.823 - - 0.823 - - - - - - - immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
51. GPR133 GPR133 1 0.823 - - 0.823 - - - - - - -
52. GRM2 ENSGALG00000003839 1 0.823 - - 0.823 - - - - - - - glutamate metabotropic receptor 2 [Source:HGNC Symbol;Acc:HGNC:4594]
53. F11 ENSGALG00000013571 1 0.823 - - 0.823 - - - - - - - coagulation factor XI [Source:HGNC Symbol;Acc:HGNC:3529]
54. TXK ENSGALG00000014127 6 0.823 - - 0.823 - - - - - - - TXK tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:12434]
55. ENSGALG00000028857 ENSGALG00000028857 1 0.823 - - 0.823 - - - - - - -
56. FAM109A 6 0.823 - - 0.823 - - - - - - - family with sequence similarity 109 member A
57. RBL2 ENSGALG00000003663 10 0.82 - - 0.820 - - - - - - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
58. DISP2 ENSGALG00000031266 5 0.811 - - 0.811 - - - - - - - dispatched RND transporter family member 2 [Source:HGNC Symbol;Acc:HGNC:19712]
59. ENSGALG00000008157 ENSGALG00000008157 94 0.809 - - - - - - - - - 0.809
60. GP9 GP9 6 0.809 - - 0.809 - - - - - - -
61. CREB5 ENSGALG00000038265 92 0.808 - - - - - - - - - 0.808 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
62. KIF13A ENSGALG00000012689 119 0.807 - - - - - - - - - 0.807 kinesin family member 13A [Source:HGNC Symbol;Acc:HGNC:14566]
63. ING5 ENSGALG00000006317 149 0.806 - - - - - - - - - 0.806 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
64. NME6 ENSGALG00000038044 1231 0.8 - - - - - - - - - 0.800 NME/NM23 nucleoside diphosphate kinase 6
65. LRRIQ1 147 0.798 - - - - - - - - - 0.798 leucine rich repeats and IQ motif containing 1, transcript variant X2
66. NPHS2 ENSGALG00000004163 850 0.796 - - 0.796 - - - - - - - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
67. ZNF385B ENSGALG00000009012 290 0.794 - - - - - - - - - 0.794 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
68. ENSGALG00000001720 ENSGALG00000001720 10 0.794 - - 0.794 - - - - - - -
69. KAT6B ENSGALG00000005035 301 0.791 - - - - - - - - - 0.791 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
70. AKAP11 ENSGALG00000022739 82 0.79 - - - - - - - - - 0.790 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
71. SLC30A9 ENSGALG00000031415 36 0.788 - - - - - - - - - 0.788 solute carrier family 30 member 9
72. CLIC3 ENSGALG00000038789 233 0.788 - - - - - - - - - 0.788 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
73. PTPLA PTPLA 43 0.786 - - 0.786 - - - - - - -
74. TGFBRAP1 ENSGALG00000016795 81 0.785 - - - - - - - - - 0.785 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
75. PTPRJ ENSGALG00000006382 891 0.784 - - - - - - - - - 0.784 protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
76. TNN ENSGALG00000004538 21 0.784 - - - - - - - - - 0.784 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
77. TTC4 10377 0.784 - - - - - - - - - 0.784 tetratricopeptide repeat domain 4
78. IPPK ENSGALG00000004684 39 0.783 - - - - - - - 0.783 - - inositol-pentakisphosphate 2-kinase [Source:NCBI gene;Acc:415951]
79. TBX5 ENSGALG00000008253 820 0.782 - - - - - - - - - 0.782 T-box 5 [Source:NCBI gene;Acc:373988]
80. TMEM200B ENSGALG00000024318 117 0.78 - - - - - - - - - 0.780 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
81. SIM2 ENSGALG00000016044 5 0.776 - - 0.776 - - - - - - - SIM bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:10883]
82. TRAK2 ENSGALG00000008370 46 0.776 - - - - - - - - - 0.776 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
83. EOMES ENSGALG00000027247 27 0.776 - - 0.776 - - - - - - - Gallus gallus eomesodermin (EOMES), mRNA. [Source:RefSeq mRNA;Acc:NM_001321555]
84. C3orf58 ENSGALG00000002347 27 0.776 - - - - - - - - - 0.776 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
85. BLOC1S2 ENSGALG00000005794 544 0.776 - - - - - - - - - 0.776 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
86. TM6SF1 ENSGALG00000006027 20 0.775 - - - - - - - - - 0.775 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
87. TNFAIP3 ENSGALG00000013861 11 0.775 - - - - - - - - - 0.775 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
88. gga-mir-6544 ENSGALG00000027916 19 0.775 - - - - - - - - - 0.775 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
89. FANCD2 ENSGALG00000003720 634 0.775 - - - - - - - - - 0.775 Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]
90. ABCB5 ENSGALG00000010901 60 0.774 - - 0.774 - - - - - - - ATP binding cassette subfamily B member 5, transcript variant X1
91. ENSGALG00000008309 ENSGALG00000008309 7 0.773 - - 0.773 - - - - - - -
92. PCOLCE2 ENSGALG00000002623 8 0.773 - - 0.773 - - - - - - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
93. DDO ENSGALG00000015057 25 0.773 - - 0.773 - - - - - - - D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
94. CARF ENSGALG00000008474 6 0.773 - - 0.773 - - - - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
95. METTL24 ENSGALG00000041120 60 0.773 - - 0.773 - - - - - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
96. RAD1 ENSGALG00000003365 1417 0.772 - - - - - - - - - 0.772 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
97. BOK ENSGALG00000005772 117 0.772 - - - - - - - - - 0.772 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
98. PXK ENSGALG00000007052 121 0.771 - - - - - - - - - 0.771 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
99. ROCK2 ENSGALG00000016451 780 0.771 - - - - - - 0.771 - - - Rho associated coiled-coil containing protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:10252]
100. NMBR ENSGALG00000013813 15 0.77 - - - - - - - - - 0.770 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]

There are 118 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA