Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARID4A

Gene Name Gene ID Reads Annotation
ARID4A ENSGALG00000012037 8554 AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]











Genes with expression patterns similar to ARID4A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARID4A ENSGALG00000012037 8554 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
2. SLC25A14 ENSGALG00000004063 5574 1.924 - - - - - - 0.940 0.984 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
3. PAX1 ENSGALG00000039040 3339 1.804 - - - - - - 0.900 0.904 - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
4. RBBP6 ENSGALG00000006043 9708 1.795 0.827 - - - - - 0.968 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
5. THOC2 ENSGALG00000008507 9501 1.725 0.752 - - - - - 0.973 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
6. CENPF ENSGALG00000009690 10429 1.712 - - - - - - 0.931 0.781 - - centromere protein F [Source:NCBI gene;Acc:395357]
7. ATRX ENSGALG00000007843 34172 1.651 0.784 - - - - - 0.867 - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
8. PEBP1 ENSGALG00000007403 77502 1.516 - - - - - - 0.745 0.771 - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
9. ENSGALG00000002595 ENSGALG00000002595 32163 0.988 - - - - - - - 0.988 - -
10. PDIA5 ENSGALG00000011689 6913 0.988 - - - - - - - 0.988 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
11. BRMS1L ENSGALG00000010093 4964 0.985 - - - - - - - 0.985 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
12. CYB5B ENSGALG00000000660 9733 0.985 - - - - - - - 0.985 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
13. ARFGAP3 ENSGALG00000014140 4612 0.984 - - - - - - - 0.984 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
14. YBX1 ENSGALG00000004848 20992 0.982 - - - - - - 0.982 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
15. EIF4G3 ENSGALG00000010084 5881 0.982 - - - - - - 0.982 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
16. DNAJA3 ENSGALG00000007821 3963 0.981 - - - - - - 0.981 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
17. GNG10 ENSGALG00000015683 6905 0.981 - - - - - - - 0.981 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
18. CAPZA1 ENSGALG00000001547 24242 0.981 - - - - - - - 0.981 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
19. SERPINH1 ENSGALG00000011214 15311 0.98 - - - - - - - 0.980 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
20. L3HYPDH ENSGALG00000012011 2212 0.98 - - - - - - - 0.980 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
21. TRIM9 ENSGALG00000012367 1267 0.98 - - - - - - - 0.980 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
22. FAM136A ENSGALG00000042163 39487 0.98 - - - - - - - 0.980 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
23. CAT ENSGALG00000030187 7534 0.98 - - - - - - - 0.980 - - catalase [Source:NCBI gene;Acc:423600]
24. CEP192 ENSGALG00000035625 2270 0.978 - - - - - - - 0.978 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
25. ATN1 ENSGALG00000014554 3270 0.978 - - - - - - 0.978 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
26. MRPS31 ENSGALG00000017033 9287 0.978 - - - - - - - 0.978 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
27. AP2B1 ENSGALG00000042125 13229 0.978 - - - - - - 0.978 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
28. MRPS7 ENSGALG00000007999 5445 0.978 - - - - - - - 0.978 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
29. MFF ENSGALG00000003079 5289 0.978 - - - - - - - 0.978 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
30. NOVA1 ENSGALG00000009850 7584 0.977 - - - - - - - 0.977 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
31. KCTD9 ENSGALG00000000275 3455 0.977 - - - - - - 0.977 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
32. POLR3H ENSGALG00000011947 2899 0.977 - - - - - - - 0.977 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
33. LYRM4 ENSGALG00000027339 2917 0.977 - - - - - - - 0.977 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
34. MYST2 MYST2 8078 0.977 - - - - - - 0.977 - - -
35. KPNA1 ENSGALG00000014426 2724 0.977 - - - - - - - 0.977 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
36. PM20D1 ENSGALG00000000724 2108 0.977 - - - - - - - 0.977 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
37. METTL11A METTL11A 11876 0.976 - - - - - - 0.976 - - -
38. WDR91 ENSGALG00000011724 5787 0.976 - - - - - - - 0.976 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
39. CLIP1 ENSGALG00000004467 1058 0.976 - - - - - - - 0.976 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
40. SHQ1 ENSGALG00000007798 1982 0.976 - - - - - - 0.976 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
41. DNA2 ENSGALG00000004037 5426 0.976 - - - - - - 0.976 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
42. LEPROTL1 ENSGALG00000024482 4251 0.976 - - - - - - 0.976 - - - leptin receptor overlapping transcript-like 1
43. C26H6ORF106 C26H6ORF106 2168 0.975 - - - - - - - 0.975 - -
44. CCDC167 ENSGALG00000010151 3567 0.975 - - - - - - - 0.975 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
45. TNFRSF11B ENSGALG00000043167 911 0.975 - - - - - - - 0.975 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
46. ENSGALG00000027854 ENSGALG00000027854 5007 0.975 - - - - - - 0.975 - - -
47. BFAR ENSGALG00000003111 1778 0.975 - - - - - - 0.975 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
48. TNPO3 ENSGALG00000039420 5178 0.975 - - - - - - - 0.975 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
49. GOT2 ENSGALG00000002321 4961 0.975 - - - - - - - 0.975 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
50. LGMN ENSGALG00000010811 7401 0.975 - - - - - - - 0.975 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
51. SGCE ENSGALG00000009670 3070 0.975 - - - - - - - 0.975 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
52. OTUD4 ENSGALG00000009968 3919 0.975 - - - - - - - 0.975 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
53. ISCA1 ENSGALG00000012606 10342 0.974 - - - - - - - 0.974 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
54. PRKAR2A ENSGALG00000007023 909 0.974 - - - - - - - 0.974 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
55. DISP1 3281 0.974 - - - - - - 0.974 - - - dispatched RND transporter family member 1, transcript variant X3
56. TCTEX1D2 ENSGALG00000027722 2201 0.974 - - - - - - - 0.974 - - Tctex1 domain containing 2
57. RRN3 ENSGALG00000041989 3934 0.974 - - - - - - 0.974 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
58. EPM2A ENSGALG00000012275 872 0.974 - - - - - - - 0.974 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
59. SHROOM2 ENSGALG00000030802 4517 0.974 - - - - - - - 0.974 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
60. COL14A1 ENSGALG00000037675 2652 0.974 - - - - - - - 0.974 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
61. PNO1 ENSGALG00000009093 11153 0.974 - - - - - - 0.974 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
62. B9D1 ENSGALG00000005096 760 0.974 - - - - - - - 0.974 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
63. KCNK5 ENSGALG00000034077 3233 0.974 - - - - - - - 0.974 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
64. IRAK2 ENSGALG00000008407 5934 0.973 - - - - - - 0.973 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
65. TLE3 ENSGALG00000008120 2655 0.973 - - - - - - - 0.973 - - transducin like enhancer of split 3, transcript variant X10
66. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.973 - - - - - - - 0.973 - -
67. EI24 ENSGALG00000038097 24081 0.973 - - - - - - 0.973 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
68. EEFSEC ENSGALG00000038684 298 0.973 - - - - - - - 0.973 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
69. POLR3E ENSGALG00000007008 4010 0.973 - - - - - - 0.973 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
70. AK6 ENSGALG00000020534 4791 0.972 - - - - - - 0.972 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
71. RILPL2 ENSGALG00000003321 5632 0.972 - - - - - - 0.972 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
72. MAP1LC3A ENSGALG00000038721 2230 0.972 - - - - - - 0.972 - - - microtubule associated protein 1 light chain 3 alpha
73. ARHGAP29 ENSGALG00000005683 3622 0.972 - - - - - - 0.972 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
74. HHIP ENSGALG00000009948 1536 0.972 - - - - - - - 0.972 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
75. NDUFB8 ENSGALG00000005704 5781 0.971 - - - - - - 0.971 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
76. ABCD3 ENSGALG00000005647 4844 0.971 - - - - - - 0.971 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
77. ELMO2 ENSGALG00000007246 4569 0.971 - - - - - - - 0.971 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
78. CLCN3 ENSGALG00000009674 3704 0.971 - - - - - - 0.971 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
79. LATS2 4776 0.971 - - - - - - 0.971 - - - large tumor suppressor kinase 2
80. TBCCD1 ENSGALG00000006566 2696 0.971 - - - - - - 0.971 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
81. RAB24 ENSGALG00000002984 6264 0.97 - - - - - - - 0.970 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
82. PPP3R1 ENSGALG00000023648 3417 0.97 - - - - - - 0.970 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
83. BMP5 ENSGALG00000016293 2119 0.969 - - - - - - - 0.969 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
84. H2AFY_1 ENSGALG00000040141 4895 0.969 - - - - - - 0.969 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
85. INTS10 ENSGALG00000010130 6320 0.969 - - - - - - 0.969 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
86. MOB2 ENSGALG00000030499 3658 0.969 - - - - - - 0.969 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
87. SCRN1 ENSGALG00000011176 3783 0.968 - - - - - - 0.968 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
88. UPF3B ENSGALG00000008618 12350 0.968 - - - - - - - 0.968 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
89. CAMKK2 ENSGALG00000040131 2795 0.967 - - - - - - 0.967 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
90. ENSGALG00000002923 ENSGALG00000002923 2233 0.967 - - - - - - 0.967 - - -
91. gga-mir-6643 ENSGALG00000027935 4442 0.967 - - - - - - 0.967 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
92. HACE1 ENSGALG00000015415 1194 0.967 - - - - - - 0.967 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
93. AKAP7 ENSGALG00000029794 3287 0.967 - - - - - - 0.967 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
94. LMNB2 ENSGALG00000000470 4364 0.966 - - - - - - 0.966 - - - lamin B2 [Source:NCBI gene;Acc:396222]
95. SREBF2 ENSGALG00000041687 4519 0.966 - - - - - - 0.966 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
96. KLHL29 ENSGALG00000016495 582 0.966 - - - - - - 0.966 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
97. NMD3 ENSGALG00000009533 8726 0.966 - - - - - - - 0.966 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
98. GCC2 ENSGALG00000016806 1085 0.966 - - - - - - 0.966 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
99. NPHP3 ENSGALG00000034586 1465 0.965 - - - - - - 0.965 - - - nephrocystin 3, transcript variant X1
100. MED6 ENSGALG00000029743 9414 0.965 - - - - - - 0.965 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]

There are 236 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA