Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARID3B

Gene Name Gene ID Reads Annotation
ARID3B ENSGALG00000001376 4290 AT-rich interaction domain 3B [Source:NCBI gene;Acc:100859297]











Genes with expression patterns similar to ARID3B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARID3B ENSGALG00000001376 4290 9 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 AT-rich interaction domain 3B [Source:NCBI gene;Acc:100859297]
2. QSER1 ENSGALG00000012030 4490 1.54 - - 0.804 - - - - - - 0.736 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
3. ZC3H11A ENSGALG00000000541 2712 1.511 - - 0.752 - - - - - - 0.759 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
4. UBN1 ENSGALG00000031416 2848 1.502 - - 0.733 - - - - - - 0.769 ubinuclein 1 [Source:NCBI gene;Acc:416398]
5. PPFIA1 ENSGALG00000035774 5258 1.469 - - - - - - 0.747 - - 0.722 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
6. CKAP2 ENSGALG00000017025 25020 1.466 - - 0.710 - - - - - - 0.756 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
7. AGGF1 ENSGALG00000004311 3011 1.458 - - 0.709 - - - - - - 0.749 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
8. RAD50 ENSGALG00000006794 4308 1.457 - - 0.732 - - - - - - 0.725 RAD50 double strand break repair protein, transcript variant X4
9. LY6E ENSGALG00000041621 16227 1.438 - - - - - - 0.726 - - 0.712 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
10. FZD6 ENSGALG00000030626 3336 1.432 - - 0.722 - - - - - - 0.710 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
11. RFC5 ENSGALG00000026517 26113 1.424 - - - - - 0.710 0.714 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
12. COMMD7 ENSGALG00000006630 11491 0.859 - - - - - - - - - 0.859 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
13. METTL16 ENSGALG00000014901 3720 0.84 - - 0.840 - - - - - - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
14. EIF2B4 ENSGALG00000033575 3801 0.831 - - 0.831 - - - - - - - eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
15. SPATA20 ENSGALG00000006857 3506 0.831 - - - - - - - - - 0.831 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
16. CASP8AP2 ENSGALG00000015611 5657 0.824 - - - - - - - - - 0.824 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
17. ROMO1 ENSGALG00000027416 9560 0.822 - - - - - - - - - 0.822 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
18. LOC770492 ENSGALG00000027778 695 0.815 - - - - - - - - - 0.815 ras-related and estrogen-regulated growth inhibitor-like
19. TSPAN5 ENSGALG00000012227 8703 0.813 - - - - - - 0.813 - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
20. EVL ENSGALG00000011209 5440 0.813 - - - - - - - 0.813 - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
21. TGFBI ENSGALG00000029429 2306 0.813 - - 0.813 - - - - - - - transforming growth factor beta induced [Source:NCBI gene;Acc:395897]
22. F2RL2 ENSGALG00000023379 1049 0.809 - - - - - - - - - 0.809 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
23. HNRNPD ENSGALG00000011184 10686 0.808 - - - - - - - - - 0.808 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
24. ARHGAP5 ENSGALG00000009992 3485 0.808 - - - - - - - 0.808 - - Rho GTPase activating protein 5 [Source:HGNC Symbol;Acc:HGNC:675]
25. TCF25 ENSGALG00000000129 7587 0.807 - - - - - - - - - 0.807 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
26. TMEM2 ENSGALG00000015138 4709 0.805 - - - - - - - 0.805 - - transmembrane protein 2, transcript variant X4
27. MYOCD ENSGALG00000001021 351 0.802 - - - - - - - - - 0.802 myocardin [Source:NCBI gene;Acc:427790]
28. ZNF395 ENSGALG00000034140 1868 0.802 - - - - - - - - - 0.802 zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
29. PQLC1 ENSGALG00000043150 3133 0.8 - - 0.800 - - - - - - - PQ loop repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:26188]
30. SSR2 ENSGALG00000000764 32190 0.797 - - - - - - - - - 0.797 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
31. KIAA1551 ENSGALG00000045168 3435 0.796 - - - - - - - - - 0.796 KIAA1551, transcript variant X1
32. KCNMA1 ENSGALG00000004980 261 0.796 - - - - - - - - - 0.796 potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
33. BRT-1 BRT-1 26083 0.794 - - - - - - - - - 0.794
34. MIER1 ENSGALG00000011118 1418 0.794 - - - - - - - - - 0.794 MIER1 transcriptional regulator [Source:NCBI gene;Acc:424702]
35. SEMA3C ENSGALG00000040444 5404 0.792 - - - - - - 0.792 - - - semaphorin 3C [Source:NCBI gene;Acc:374090]
36. COX17 ENSGALG00000014981 5646 0.792 - - - - - - - - - 0.792 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
37. RHOT1 ENSGALG00000003397 5149 0.791 - - - - - - - - - 0.791 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
38. CPZ ENSGALG00000030209 8822 0.789 - - - - - - - 0.789 - - carboxypeptidase Z [Source:NCBI gene;Acc:395266]
39. ODZ3 ODZ3 2213 0.789 - - - - - - - - - 0.789
40. HOXA5 ENSGALG00000025929 6231 0.787 - - - - - - - - - 0.787 homeobox A5 [Source:NCBI gene;Acc:100858404]
41. CLTCL1 ENSGALG00000041760 9351 0.786 - - - - - - 0.786 - - - clathrin, heavy chain-like 1, transcript variant X6
42. POLE3 ENSGALG00000008873 9161 0.784 - - - - - - 0.784 - - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
43. API5 ENSGALG00000037968 18265 0.784 - - - - - - 0.784 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
44. GSTAL2 ENSGALG00000028551 4899 0.783 - - - - - - - - - 0.783 glutathione S-transferase alpha-like 2, transcript variant X4
45. CCDC66 ENSGALG00000005450 1262 0.783 - - - - - - - - - 0.783 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
46. LAMP2 ENSGALG00000008572 198 0.782 - - - - - - - - - 0.782 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
47. MFSD1 ENSGALG00000009593 3116 0.782 - - - - - - - - - 0.782 major facilitator superfamily domain containing 1 [Source:NCBI gene;Acc:425017]
48. KIDINS220 ENSGALG00000016409 854 0.781 - - - - - - - - - 0.781 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
49. GLG1 ENSGALG00000039818 6221 0.78 - - 0.780 - - - - - - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
50. POLDIP2 ENSGALG00000003211 11664 0.779 - - - - - - 0.779 - - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
51. KMT2C 6306 0.778 - - - - - - - - - 0.778 lysine methyltransferase 2C, transcript variant X14
52. NLGN1 ENSGALG00000040938 651 0.777 - - - - - - - - - 0.777 neuroligin 1 [Source:NCBI gene;Acc:424980]
53. CKI CKI 2845 0.777 - - - - - - - 0.777 - -
54. MPP5 ENSGALG00000009581 724 0.776 - - - - - - - - - 0.776 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
55. POLR2B ENSGALG00000011387 4864 0.776 - - - - - - - - - 0.776 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
56. BRF1 ENSGALG00000011705 3406 0.775 - - 0.775 - - - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
57. CDH4 ENSGALG00000005102 3446 0.775 - - - - - - 0.775 - - - cadherin 4 [Source:NCBI gene;Acc:419222]
58. B3GALTL B3GALTL 4128 0.773 - - - - - - - - - 0.773
59. RPE ENSGALG00000002847 7644 0.773 - - - - - - - 0.773 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
60. SUV39H2 ENSGALG00000013920 4360 0.773 - - - - - - - - - 0.773 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
61. ADSL ENSGALG00000012034 10280 0.772 - - - - - - 0.772 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
62. PRR14L ENSGALG00000028473 439 0.772 - - - - - - - - - 0.772 proline rich 14-like, transcript variant X5
63. TMEM59 ENSGALG00000010746 4669 0.772 - - - - - - 0.772 - - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
64. POLR1B ENSGALG00000032273 3845 0.771 - - - - - - - - - 0.771 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
65. MYO5A ENSGALG00000031987 2469 0.771 - - - - - - - - - 0.771 myosin VA [Source:NCBI gene;Acc:396237]
66. RTFDC1 ENSGALG00000007709 1727 0.77 - - 0.770 - - - - - - - replication termination factor 2 domain containing 1 [Source:NCBI gene;Acc:419329]
67. SYNE1 ENSGALG00000013505 2324 0.769 - - 0.769 - - - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
68. TDP2 ENSGALG00000013637 6595 0.768 - - 0.768 - - - - - - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
69. C3H6ORF72 C3H6ORF72 1471 0.768 - - - - - - - - - 0.768
70. WRNIP1 ENSGALG00000012856 1954 0.767 - - - - - - - - - 0.767 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
71. TUBB2C TUBB2C 44249 0.767 - - - - - - 0.767 - - -
72. FARP1 ENSGALG00000016886 13132 0.767 - - 0.767 - - - - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
73. MB21D1 2460 0.767 - - - - - - - - - 0.767 Mab-21 domain containing 1
74. RWDD2B ENSGALG00000015807 3601 0.766 - - - - - - - - - 0.766 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
75. DNMT3B ENSGALG00000041461 12959 0.766 - - - - - - - 0.766 - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
76. RAB24 ENSGALG00000002984 6264 0.766 - - - - - - 0.766 - - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
77. PPP2R5C ENSGALG00000029996 5759 0.765 - - - - - - - - - 0.765 protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
78. ATP5L ENSGALG00000006899 69561 0.765 - - - - - - 0.765 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
79. ARID1B ENSGALG00000013683 3397 0.764 - - - - - - - - - 0.764 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
80. TRIM8 ENSGALG00000036785 5304 0.763 - - - - - - - 0.763 - - tripartite motif containing 8 [Source:NCBI gene;Acc:423864]
81. ENSGALG00000002903 ENSGALG00000002903 18304 0.761 - - - - - - 0.761 - - -
82. MTSS1 ENSGALG00000041969 1312 0.761 - - - - - - - - - 0.761 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
83. SHMT1 ENSGALG00000005046 1430 0.761 - - 0.761 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
84. ETFDH ENSGALG00000009442 7671 0.761 - - - - - - - - - 0.761 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
85. TAF1D ENSGALG00000017220 3012 0.76 - - 0.760 - - - - - - - TATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]
86. TCOF1 ENSGALG00000005535 24554 0.76 - - - - - - - - - 0.760 treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
87. MAN2A1 ENSGALG00000000255 4543 0.759 - - - - - - - - - 0.759 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
88. UHRF2 ENSGALG00000015052 1268 0.759 - - 0.759 - - - - - - - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
89. CABLES1 ENSGALG00000014998 1636 0.759 - - - - - - - - - 0.759 Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
90. CDK5RAP1 ENSGALG00000006738 2628 0.759 - - - - - - 0.759 - - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
91. PTK2 ENSGALG00000031741 13103 0.758 - - - - - - 0.758 - - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
92. ENSGALG00000021487 ENSGALG00000021487 1218 0.757 - - - - - - - 0.757 - -
93. HELLS ENSGALG00000005451 7094 0.756 - - - - - - - - - 0.756 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
94. TIAR TIAR 2471 0.756 - - - - - - - - - 0.756
95. SNRNP48 ENSGALG00000013005 1468 0.756 - - - - - - - - - 0.756 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
96. SLC35B1 ENSGALG00000035057 10683 0.756 - - - - - - - - - 0.756 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
97. CETN1 ENSGALG00000026741 7243 0.755 - - - - - - - - - 0.755 centrin 1 [Source:NCBI gene;Acc:422668]
98. DIABLO ENSGALG00000004412 9499 0.755 - - 0.755 - - - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
99. PGD ENSGALG00000002797 15115 0.755 - - - - - - - - - 0.755 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
100. STRBP ENSGALG00000029927 3516 0.755 - - 0.755 - - - - - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]

There are 259 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA