Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ARID3A

Gene Name Gene ID Reads Annotation
ARID3A ENSDARG00000070843 1613 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]










Genes with expression patterns similar to ARID3A

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ARID3A ENSDARG00000070843 1613 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
2. tet3 ENSDARG00000062646 6672 2.429 - 0.808 - - 0.914 - 0.707 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
3. kcnq5a ENSDARG00000069954 492 1.904 - - - - 0.993 - - - 0.911 potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
4. ifrd1 ENSDARG00000068708 2858 1.888 - - - - 0.985 - - - 0.903 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
5. ctdspla ENSDARG00000071673 1447 1.833 - 0.844 - - 0.989 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
6. tm9sf4 ENSDARG00000002536 1684 1.823 - - - - 0.960 - - - 0.863 transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
7. smim7 ENSDARG00000074848 1260 1.818 - 0.827 - - 0.991 - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
8. sox5 ENSDARG00000011582 3632 1.815 - - - - 0.940 - - - 0.875 SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
9. RNF111 ENSDARG00000078802 1357 1.804 - 0.814 - - 0.990 - - - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
10. aldh16a1 ENSDARG00000037935 617 1.788 - 0.884 - - - - - - 0.904 aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
11. ppp1r7 ENSDARG00000009740 2606 1.786 - 0.833 - - 0.953 - - - - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
12. 5S_rRNA_21 5S_rRNA_21 1323 1.779 - - - - 0.988 - - - 0.791
13. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 1.772 0.780 - - - 0.992 - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
14. cwc22 ENSDARG00000014008 2385 1.768 - - - - 0.976 - - - 0.792 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
15. CU861453.1 ENSDARG00000097192 271 1.76 - 0.846 - - - - - - 0.914
16. klf11a ENSDARG00000030844 3972 1.746 - - - - 0.987 0.759 - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
17. hoxc11a ENSDARG00000070351 1783 1.738 - 0.758 - - 0.980 - - - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
18. gde1 ENSDARG00000055108, ENSDARG00000110855 1261 1.736 - 0.861 - - - - - - 0.875 glycerophosphodiester phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-881]
19. cltcb ENSDARG00000090716 5544 1.724 - - - - 0.961 - - - 0.763 clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
20. WDR61 ENSDARG00000007755 2827 1.713 - - - - 0.974 - 0.739 - - WD repeat domain 61 [Source:ZFIN;Acc:ZDB-GENE-040426-1851]
21. MARK3 MARK3 1767 1.705 - - - - 0.989 0.716 - - -
22. tpt1 ENSDARG00000092693 1110 1.703 - - - - 0.990 - 0.713 - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
23. pvrl1b 1645 1.701 - 0.830 - - - - - - 0.871 poliovirus receptor-related 1b
24. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.698 - - - - - - 0.794 - 0.904 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
25. stam2 ENSDARG00000005318 2980 1.695 - 0.720 - - 0.975 - - - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
26. zdhhc17 ENSDARG00000070441 1073 1.694 - 0.807 - - - - - - 0.887 zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
27. notch2 ENSDARG00000043130 4430 1.691 - 0.725 - - 0.966 - - - - notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
28. trim16 ENSDARG00000010673 519 1.68 - 0.746 - - - - - - 0.934 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
29. wif1 ENSDARG00000005541 1689 1.679 - 0.823 - - - - - - 0.856 wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
30. ints8 ENSDARG00000057986 1063 1.675 - 0.807 - - - - - - 0.868 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
31. uchl1 ENSDARG00000026871 1578 1.672 - 0.846 - - - - - - 0.826 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-030131-3844]
32. Sep-02 Sep-02 10074 1.669 - - - - 0.920 - 0.749 - -
33. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.663 - - - - 0.956 - - - 0.707 staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
34. grb2b ENSDARG00000038059 9050 1.661 - - - - 0.953 - 0.708 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
35. slc39a9 ENSDARG00000070447 971 1.659 - 0.759 - - - - - - 0.900 solute carrier family 39, member 9 [Source:ZFIN;Acc:ZDB-GENE-060314-3]
36. ano9a ENSDARG00000076320, ENSDARG00000078941 865 1.65 - 0.869 - - - - - - 0.781 anoctamin 9a [Source:ZFIN;Acc:ZDB-GENE-071004-46]
37. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 1.644 - 0.719 - - - - - - 0.925 fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
38. wdr26b ENSDARG00000006812 2216 1.643 - - - - - - 0.821 - 0.822 WD repeat domain 26b [Source:ZFIN;Acc:ZDB-GENE-041014-277]
39. herpud1 ENSDARG00000024314 1207 1.623 - 0.799 - - 0.824 - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
40. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.621 - - - 0.756 - - - - 0.865 target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
41. anxa1b ENSDARG00000100095 7763 1.619 - 0.736 - - 0.883 - - - - annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
42. dhrs13a.2 ENSDARG00000111240 491 1.618 - 0.714 - - - - - - 0.904 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
43. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.614 - 0.815 - - - - - - 0.799 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
44. hic1l ENSDARG00000045660 1489 1.61 - 0.722 - - - - - - 0.888 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
45. FOXO4 ENSDARG00000055792 1457 1.604 - 0.810 - - - - - - 0.794 forkhead box O4 [Source:ZFIN;Acc:ZDB-GENE-150311-1]
46. lmf2a ENSDARG00000078094 352 1.597 - 0.850 - - - - 0.747 - - lipase maturation factor 2a [Source:ZFIN;Acc:ZDB-GENE-080723-47]
47. dvl3a ENSDARG00000015707 1132 1.579 - - - 0.727 - - - - 0.852 dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
48. insrb ENSDARG00000071524 1820 1.573 - 0.854 - - - 0.719 - - - insulin receptor b [Source:ZFIN;Acc:ZDB-GENE-020503-4]
49. efna5a ENSDARG00000089790 1007 1.571 - - - - - - 0.710 - 0.861 ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
50. acaa2 ENSDARG00000038881 2649 1.57 - - - - - - 0.772 - 0.798 acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
51. FBXL3 FBXL3 1769 1.568 - - - - - - 0.709 - 0.859
52. dock7 ENSDARG00000078675 1995 1.553 - 0.768 - - - - - - 0.785 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
53. ftsjd2 ftsjd2 2694 1.527 - 0.719 - - - - - - 0.808
54. sumo3b ENSDARG00000035993 3414 1.521 - 0.741 - - - - - - 0.780 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
55. TNPO2 ENSDARG00000042887 2290 1.516 - 0.744 - - - - - - 0.772 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
56. slc26a11 ENSDARG00000043021 157 1.506 0.765 0.741 - - - - - - - solute carrier family 26 (anion exchanger), member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5349]
57. nrm ENSDARG00000063690 1371 1.487 - 0.756 - - - - - - 0.731 nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
58. sesn3 ENSDARG00000015822 5328 1.476 - 0.709 - - - - - - 0.767 sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
59. mllt4 mllt4 2939 1.457 - - - - - - 0.705 - 0.752
60. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.454 - 0.752 - - - - 0.702 - - zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
61. ankrd12 ENSDARG00000052419 2579 1.45 - 0.717 - - - - 0.733 - - ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
62. pfdn6 ENSDARG00000037108 2083 1.444 - 0.711 - 0.733 - - - - - prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
63. bnip3la ENSDARG00000025468 3097 1.442 - 0.727 - - - - - - 0.715 BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
64. gabpb2a ENSDARG00000007943 1570 0.994 - - - - 0.994 - - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
65. vldlr ENSDARG00000006257 772 0.994 - - - - 0.994 - - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
66. sema3fa ENSDARG00000011163 759 0.993 - - - - 0.993 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
67. tmem234 ENSDARG00000078333 488 0.993 - - - - 0.993 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
68. si:dkey-114e9.1 si:dkey-114e9.1 233 0.993 - - - - 0.993 - - - -
69. errfi1 errfi1 979 0.993 - - - - 0.993 - - - -
70. CABZ01073954.1 CABZ01073954.1 258 0.993 - - - - 0.993 - - - -
71. slc4a2b ENSDARG00000052330 1900 0.993 - - - - 0.993 - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
72. bin2b ENSDARG00000010255 2649 0.993 - - - - 0.993 - - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
73. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.993 - - - - 0.993 - - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
74. slc46a1 ENSDARG00000026149 297 0.993 - - - - 0.993 - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
75. pbx1a ENSDARG00000100494 854 0.993 - - - - 0.993 - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
76. si:dkey-70e17.2 si:dkey-70e17.2 371 0.993 - - - - 0.993 - - - -
77. CR361563.1 CR361563.1 1355 0.992 - - - - 0.992 - - - -
78. C3H16orf89 C3H16orf89 449 0.992 - - - - 0.992 - - - -
79. ripk4 ENSDARG00000043211 775 0.992 - - - - 0.992 - - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
80. nrg2a ENSDARG00000077818 854 0.992 - - - - 0.992 - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
81. limk2 ENSDARG00000005104 2598 0.992 - - - - 0.992 - - - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
82. CABZ01072607.1 ENSDARG00000113761 784 0.992 - - - - 0.992 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
83. ttc27 ENSDARG00000007918 1228 0.992 - - - - 0.992 - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
84. acvr2aa ENSDARG00000011188 1454 0.992 - - - - 0.992 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
85. iars2 ENSDARG00000044134 1990 0.992 - - - - 0.992 - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
86. si:dkey-30k6.5 ENSDARG00000057238 617 0.992 - - - - 0.992 - - - - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
87. ppip5k2 ENSDARG00000078441 1074 0.992 - - - - 0.992 - - - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
88. slc9a3r1 slc9a3r1 743 0.991 - - - - 0.991 - - - -
89. trim24 ENSDARG00000103350 431 0.991 - - - - 0.991 - - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
90. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.991 - - - - 0.991 - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
91. ERO1LB ERO1LB 1433 0.991 - - - - 0.991 - - - -
92. wdr43 ENSDARG00000077264 1992 0.99 - - - - 0.990 - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
93. inpp4aa ENSDARG00000063352 1297 0.99 - - - - 0.990 - - - - inositol polyphosphate-4-phosphatase type I Aa [Source:ZFIN;Acc:ZDB-GENE-060312-5]
94. epc1 epc1 1164 0.99 - - - - 0.990 - - - -
95. slc48a1b ENSDARG00000026109 1427 0.99 - - - - 0.990 - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
96. commd4 ENSDARG00000061946 3281 0.99 - - - - 0.990 - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
97. RNF214 RNF214 816 0.989 - - - - 0.989 - - - -
98. rfc5 ENSDARG00000035634 974 0.989 - - - - 0.989 - - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
99. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.988 - - - - 0.988 - - - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
100. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 0.988 - - - - 0.988 - - - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]

There are 1221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA