Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARID1B

Gene Name Gene ID Reads Annotation
ARID1B ENSGALG00000013683 3397 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]











Genes with expression patterns similar to ARID1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARID1B ENSGALG00000013683 3397 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
2. TMEM237 ENSGALG00000008381 1317 2.44 - - - - - - - 0.993 0.703 0.744 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
3. GID8 ENSGALG00000005700 3992 1.803 - - - - - - - 0.970 - 0.833 GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
4. LEMD2 ENSGALG00000002870 2803 1.716 - - - - - - 0.728 0.988 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
5. RAD50 ENSGALG00000006794 4308 1.675 - - - - - - - 0.948 - 0.727 RAD50 double strand break repair protein, transcript variant X4
6. SLIT2 ENSGALG00000041121 3223 1.654 - - - - - - - 0.932 - 0.722 slit guidance ligand 2 [Source:NCBI gene;Acc:373967]
7. WDR12 ENSGALG00000008470 7654 1.654 - - - - - - - 0.835 - 0.819 WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
8. ZMYND11 ENSGALG00000006599 5740 1.572 - - 0.713 - - - - 0.859 - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
9. TMED7 ENSGALG00000028484 21008 1.505 - - - - - - - 0.798 - 0.707 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
10. SEMA7A ENSGALG00000001412 1505 0.992 - - - - - - - 0.992 - - semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene;Acc:415298]
11. KLHL13 KLHL13 2712 0.991 - - - - - - - 0.991 - -
12. ETAA1 ENSGALG00000027922 1684 0.99 - - - - - - - 0.990 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
13. gga-mir-1723 ENSGALG00000025386 6662 0.99 - - - - - - - 0.990 - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
14. ZUFSP 549 0.99 - - - - - - - 0.990 - - zinc finger with UFM1 specific peptidase domain
15. LTN1 ENSGALG00000015804 3784 0.99 - - - - - - - 0.990 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
16. DENND1A ENSGALG00000001157 503 0.99 - - - - - - - 0.990 - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
17. PTN ENSGALG00000040493 864 0.99 - - - - - - - 0.990 - - pleiotrophin [Source:NCBI gene;Acc:418125]
18. MYO3A ENSGALG00000007647 643 0.989 - - - - - - - 0.989 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
19. FNDC5 ENSGALG00000003567 3328 0.989 - - - - - - - 0.989 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
20. C14orf105 C14orf105 135 0.988 - - - - - - - 0.988 - -
21. PIK3R3 ENSGALG00000010335 374 0.988 - - - - - - - 0.988 - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
22. C2CD5 ENSGALG00000013210 3060 0.988 - - - - - - - 0.988 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
23. PTER ENSGALG00000008728 162 0.988 - - - - - - - 0.988 - - phosphotriesterase related [Source:HGNC Symbol;Acc:HGNC:9590]
24. ARHGEF12 ENSGALG00000006663 1369 0.988 - - - - - - - 0.988 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
25. H2AFY2 ENSGALG00000004794 576 0.988 - - - - - - - 0.988 - - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
26. RFLB RFLB 140 0.988 - - - - - - - 0.988 - -
27. SMAD1 ENSGALG00000009977 3540 0.988 - - - - - - - 0.988 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
28. GAS6 ENSGALG00000016820 481 0.988 - - - - - - - 0.988 - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
29. CACTIN ENSGALG00000024391 1408 0.988 - - - - - - - 0.988 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
30. ENSGALG00000029113 ENSGALG00000029113 737 0.988 - - - - - - - 0.988 - -
31. TMEM245 ENSGALG00000013138 501 0.987 - - - - - - - 0.987 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
32. C1orf123 ENSGALG00000026516 3227 0.987 - - - - - - - 0.987 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
33. GALNT2 ENSGALG00000011106 167 0.987 - - - - - - - 0.987 - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
34. THBS4 ENSGALG00000014804 4228 0.987 - - - - - - - 0.987 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
35. HNRNPK ENSGALG00000012591 1109 0.987 - - - - - - - 0.987 - - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
36. ILKAP ENSGALG00000006253 7388 0.987 - - - - - - - 0.987 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
37. ARRDC2 ENSGALG00000003527 1797 0.987 - - - - - - - 0.987 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
38. LAMA4 ENSGALG00000015001 993 0.986 - - - - - - - 0.986 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
39. SRFBP1 ENSGALG00000005316 6826 0.986 - - - - - - - 0.986 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
40. MMP16 ENSGALG00000032031 827 0.986 - - - - - - - 0.986 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
41. PLEKHA3 ENSGALG00000009135 1700 0.986 - - - - - - - 0.986 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
42. PCP4 ENSGALG00000022819 880 0.986 - - - - - - - 0.986 - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
43. SEC24B ENSGALG00000035482 3430 0.986 - - - - - - - 0.986 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
44. SEMA5B ENSGALG00000011686 4184 0.986 - - - - - - - 0.986 - - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
45. NPB NPB 8056 0.985 - - - - - - - 0.985 - -
46. CDK14 ENSGALG00000009062 995 0.985 - - - - - - - 0.985 - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
47. FAAH ENSGALG00000010433 3309 0.985 - - - - - - - 0.985 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
48. PLPPR1 ENSGALG00000015542 3179 0.983 - - - - - - - 0.983 - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
49. LIN28A ENSGALG00000036022 542 0.983 - - - - - - - 0.983 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
50. GATAD2A ENSGALG00000042900 6337 0.983 - - - - - - - 0.983 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
51. PALD1 ENSGALG00000004465 3553 0.982 - - - - - - - 0.982 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
52. MEIS1 ENSGALG00000041626 3865 0.982 - - - - - - - 0.982 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
53. RIPK1 ENSGALG00000012827 3405 0.982 - - - - - - - 0.982 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
54. LDLRAP1 ENSGALG00000001051 1657 0.981 - - - - - - - 0.981 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
55. SKIV2L2 ENSGALG00000014709 2926 0.981 - - - - - - - 0.981 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
56. RERG ENSGALG00000028186 1124 0.981 - - - - - - - 0.981 - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
57. HTRA1 ENSGALG00000041140 1750 0.981 - - - - - - - 0.981 - - HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
58. C6ORF162 C6ORF162 4217 0.981 - - - - - - - 0.981 - -
59. ARNT ENSGALG00000000751 3495 0.98 - - - - - - - 0.980 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
60. TMEM144 ENSGALG00000026253 1744 0.98 - - - - - - - 0.980 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
61. ENSGALG00000007355 ENSGALG00000007355 2149 0.98 - - - - - - - 0.980 - -
62. SMAD2W ENSGALG00000014184 1773 0.979 - - - - - - - 0.979 - - SMAD family member 2-W, transcript variant X3
63. ARL1 ENSGALG00000011651 3230 0.978 - - - - - - - 0.978 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
64. BLZF1 ENSGALG00000015225 3594 0.978 - - - - - - - 0.978 - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
65. PSD2 ENSGALG00000030836 236 0.977 - - - - - - - 0.977 - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
66. AEN ENSGALG00000044204 2633 0.976 - - - - - - - 0.976 - - apoptosis enhancing nuclease, transcript variant X1
67. ARHGAP32 ENSGALG00000043511 7916 0.976 - - - - - - - 0.976 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
68. B4GALT3 ENSGALG00000022891 2825 0.975 - - - - - - - 0.975 - - beta-1,4-galactosyltransferase 3
69. SPRYD7 ENSGALG00000017010 1910 0.975 - - - - - - - 0.975 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
70. SMPD4 ENSGALG00000006455 2270 0.974 - - - - - - - 0.974 - - sphingomyelin phosphodiesterase 4, transcript variant X1
71. CDXB CDXB 143 0.974 - - - - - - - 0.974 - -
72. C11H19ORF12 C11H19ORF12 5149 0.974 - - - - - - - 0.974 - -
73. NOL6 ENSGALG00000030730 7191 0.973 - - - - - - - 0.973 - - nucleolar protein 6
74. AK1 ENSGALG00000029150 5935 0.973 - - - - - - - 0.973 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
75. HEATR6 ENSGALG00000005516 3347 0.973 - - - - - - - 0.973 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
76. C4H4ORF41 C4H4ORF41 1520 0.972 - - - - - - - 0.972 - -
77. SYAP1 ENSGALG00000016548 3347 0.972 - - - - - - - 0.972 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
78. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.971 - - - - - - - 0.971 - -
79. LRRFIP2 ENSGALG00000033102 8250 0.971 - - - - - - - 0.971 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
80. SPERT ENSGALG00000016981 145 0.97 - - - - - - - - - 0.970 spermatid associated [Source:NCBI gene;Acc:418848]
81. KLC1 ENSGALG00000011528 1621 0.969 - - - - - - - - - 0.969 kinesin light chain 1, transcript variant X6
82. SGPL1 ENSGALG00000004553 4520 0.969 - - - - - - - 0.969 - - sphingosine-1-phosphate lyase 1 [Source:NCBI gene;Acc:423714]
83. UBXN2B ENSGALG00000030585 2177 0.969 - - - - - - - 0.969 - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
84. SNX3 ENSGALG00000015304 1631 0.968 - - - - - - - 0.968 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
85. PRPSAP2 ENSGALG00000005064 5549 0.968 - - - - - - - 0.968 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
86. TMEM47 ENSGALG00000027198 3619 0.967 - - - - - - - 0.967 - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
87. TDRD3 ENSGALG00000016936 3412 0.966 - - - - - - - 0.966 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
88. YOD1 ENSGALG00000037597 2989 0.966 - - - - - - - 0.966 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
89. SH3BP2 ENSGALG00000015665 431 0.965 - - - - - - - - - 0.965 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
90. KIDINS220 ENSGALG00000016409 854 0.962 - - - - - - - - - 0.962 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
91. ATRIP ENSGALG00000004670 3647 0.961 - - - - - - - 0.961 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
92. DNTTIP1 ENSGALG00000003575 4687 0.961 - - - - - - - 0.961 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
93. CTNNBIP1 ENSGALG00000026306 8049 0.961 - - - - - - - 0.961 - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
94. AHR ENSGALG00000010836 2276 0.958 - - - - - - - 0.958 - - aryl hydrocarbon receptor [Source:NCBI gene;Acc:373907]
95. SPATA20 ENSGALG00000006857 3506 0.956 - - - - - - - - - 0.956 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
96. PAXIP1 ENSGALG00000036064 3120 0.956 - - - - - - - 0.956 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
97. THAP5 ENSGALG00000009494 6540 0.956 - - - - - - - 0.956 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
98. HIBADH ENSGALG00000033207 3540 0.954 - - - - - - - 0.954 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
99. HSDL2 ENSGALG00000015663 8966 0.953 - - - - - - - 0.953 - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
100. CUL4B ENSGALG00000008559 16864 0.95 - - - - - - - 0.950 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]

There are 404 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA