Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ARHGEF40

Gene Name Gene ID Reads Annotation
ARHGEF40 ENSDARG00000078979 25 Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]










Genes with expression patterns similar to ARHGEF40

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ARHGEF40 ENSDARG00000078979 25 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
2. si:dkey-32m20.1 43 2.779 - - - - 0.958 0.939 0.882 - - si:dkey-32m20.1
3. CU457778.1 ENSDARG00000098976 38 2 - - - - - 1.000 1.000 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
4. sts ENSDARG00000053241 10 2 - - - - - 1.000 1.000 - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
5. odf3l2 36 1.987 1.000 - - - - - 0.987 - - outer dense fiber of sperm tails 3-like 2
6. FP102191.1 FP102191.1 21 1.963 - - - - - 1.000 0.963 - -
7. MEP1B ENSDARG00000037533, ENSDARG00000115538 10 1.955 - - - 0.955 - - 1.000 - - meprin A, beta [Source:ZFIN;Acc:ZDB-GENE-041014-209]
8. si:dkey-78a14.5 14 1.939 - - - - - 0.939 1.000 - - si:dkey-78a14.5, transcript variant X2
9. adipoqa ENSDARG00000062228 7 1.901 - - - - - - 1.000 0.901 - adiponectin, C1Q and collagen domain containing, a [Source:ZFIN;Acc:ZDB-GENE-080423-2]
10. CU915778.1 ENSDARG00000099025 40 1.899 - 0.899 - - - - 1.000 - -
11. fgf20b ENSDARG00000086070 13 1.893 - - - - - 1.000 0.893 - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
12. SLC5A6 SLC5A6 179 1.892 - - - - 0.958 - 0.934 - -
13. FAM46A FAM46A 81 1.884 - - - - - 0.884 1.000 - -
14. si:dkey-49n23.3 ENSDARG00000095325 4 1.882 1.000 - - - - - 0.882 - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
15. BX927369.1 ENSDARG00000105047 21 1.879 - - - - - 1.000 0.879 - -
16. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 1.872 - - - - - 0.884 0.988 - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
17. TRAPPC9 ENSDARG00000099118 26 1.868 1.000 - - - - 0.868 - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
18. si:dkey-274m14.3 si:dkey-274m14.3 7 1.867 1.000 - - 0.867 - - - - -
19. si:dkey-70n11.1 si:dkey-70n11.1 2 1.864 - - - - - - 0.963 0.901 -
20. STK31 ENSDARG00000056339 37 1.86 - - - - - 1.000 0.860 - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
21. slc7a10b ENSDARG00000051730 44 1.853 - - - - 0.907 - 0.946 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
22. si:dkeyp-73a2.2 ENSDARG00000079785 313 1.848 - 0.916 - - - - 0.932 - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
23. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1.818 0.818 - - - - - 1.000 - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
24. si:dkey-111e8.5 ENSDARG00000093960 28 1.814 - 0.930 - - - 0.884 - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
25. zmp:0000001267 ENSDARG00000089192 12 1.814 - 0.935 - - - 0.879 - - - zmp:0000001267 [Source:ZFIN;Acc:ZDB-GENE-140106-227]
26. si:ch211-73m21.1 ENSDARG00000096491 10 1.798 - 0.798 - - - 1.000 - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
27. PROC PROC 11 1.798 - 0.798 - - - - 1.000 - -
28. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1.798 1.000 0.798 - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
29. AKNA_1 AKNA_1 2 1.798 - 0.798 - - - 1.000 - - -
30. atad1b ENSDARG00000056609 40 1.798 - 0.798 - - - 1.000 - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
31. pcsk7 ENSDARG00000069968 5 1.798 - 0.798 - - - - 1.000 - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
32. MCOLN2 ENSDARG00000098918 12 1.798 - 0.798 - - - 1.000 - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
33. si:ch211-102g22.3 si:ch211-102g22.3 2 1.798 - 0.798 - - - 1.000 - - -
34. CR450736.2 CR450736.2 5 1.778 - 0.853 - 0.925 - - - - -
35. si:ch211-224l10.4 ENSDARG00000088762 36 1.753 - - - - - 0.807 0.946 - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
36. clcn1a ENSDARG00000062084 120 1.748 0.957 - 0.791 - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
37. adrb3b ENSDARG00000052919 16 1.747 - - - 0.747 - - 1.000 - - adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154]
38. si:ch211-66k16.28 ENSDARG00000088423 80 1.746 - - - - - 1.000 - - 0.746 si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
39. zgc:162184 ENSDARG00000077217 47 1.741 - 0.853 - - - 0.888 - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
40. FAM177A1 ENSDARG00000079636 19 1.739 - - - 0.776 - - 0.963 - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
41. slc15a1b ENSDARG00000044528 6 1.73 - - - - - 1.000 0.730 - - solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
42. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 1.725 - - - 0.925 - - 0.800 - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
43. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1.723 - 0.798 - 0.925 - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
44. BX072576.1 ENSDARG00000078204 12 1.723 - 0.798 - 0.925 - - - - - beta-2 adrenergic receptor-like [Source:NCBI gene;Acc:101885642]
45. trip4 ENSDARG00000098074 79 1.717 - - - - - 1.000 0.717 - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
46. dync1i2b ENSDARG00000103195 46 1.715 1.000 - - - - 0.715 - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
47. gpr126 gpr126 51 1.714 - 0.798 - - - - 0.916 - -
48. si:dkey-14d8.2 38 1.708 - 0.798 - - - - 0.910 - - si:dkey-14d8.2
49. SNORA19 SNORA19 24 1.708 1.000 - - - - 0.708 - - -
50. CABZ01090303.1 CABZ01090303.1 2 1.699 - 0.798 - - - - - 0.901 -
51. slc1a1 ENSDARG00000020212 104 1.694 0.896 0.798 - - - - - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
52. slc13a5 slc13a5 15 1.69 - 0.841 - - - - 0.849 - -
53. ANKRD52 ANKRD52 78 1.688 - 0.882 - - - - - - 0.806
54. si:dkey-245p14.4 ENSDARG00000070320 418 1.688 0.868 0.820 - - - - - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
55. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 1.685 - 0.798 - - - - 0.887 - - arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
56. AL935174.1 ENSDARG00000109674 18 1.654 - 0.798 - - - 0.856 - - -
57. FP236789.1 ENSDARG00000105406 57 1.651 - - - - - 0.855 0.796 - -
58. KCNAB3 KCNAB3 134 1.649 - 0.798 - - 0.851 - - - -
59. pole2 ENSDARG00000100028 42 1.649 - 0.798 - - - - 0.851 - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
60. ATP6AP1L ATP6AP1L 164 1.646 0.848 0.798 - - - - - - -
61. ZP2_2 ZP2_2 28 1.644 - - - - - - 0.910 0.734 -
62. si:dkey-238o13.4 ENSDARG00000078847 884 1.636 - - - - 0.861 - 0.775 - - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
63. vipr1b ENSDARG00000059058 62 1.629 - - - - 0.917 - - 0.712 - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
64. SLC26A6 ENSDARG00000055835, ENSDARG00000097292 62 1.628 - - - - 0.886 0.742 - - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
65. TUSC5_1 TUSC5_1 320 1.626 0.767 0.859 - - - - - - -
66. MYCT1 MYCT1 64 1.618 - 0.798 - - - - 0.820 - -
67. cyp2p7 ENSDARG00000042980 29 1.616 - 0.757 - - - 0.859 - - - cytochrome P450, family 2, subfamily P, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-041001-155]
68. eno2 ENSDARG00000014287 2162 1.61 0.746 - - - 0.864 - - - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
69. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 1.609 - - - - 0.704 - 0.905 - - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
70. grn1 ENSDARG00000089362 20 1.599 - 0.853 - - - - - 0.746 - granulin 1 [Source:ZFIN;Acc:ZDB-GENE-060103-1]
71. ccny ENSDARG00000063677 66 1.587 - - - - - 0.734 0.853 - - cyclin Y [Source:ZFIN;Acc:ZDB-GENE-091117-45]
72. WDSUB1 ENSDARG00000090418 357 1.581 0.801 - - - - - 0.780 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
73. naif1 ENSDARG00000062753 176 1.579 0.715 - - - 0.864 - - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
74. wu:fc32g12 wu:fc32g12 198 1.574 - - - - - 0.826 0.748 - -
75. il11a ENSDARG00000037859 5 1.569 0.771 0.798 - - - - - - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
76. SLC28A2 SLC28A2 21 1.566 - 0.708 - - - 0.858 - - -
77. si:dkey-189h5.6 ENSDARG00000095188 50 1.552 - 0.798 - - - 0.754 - - - si:dkey-189h5.6 [Source:ZFIN;Acc:ZDB-GENE-060526-230]
78. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.551 - 0.798 - 0.753 - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
79. si:busm1-71b9.3 11 1.542 - 0.798 - - - - - 0.744 - si:busm1-71b9.3, transcript variant X4
80. ptx3b ENSDARG00000079515 10 1.539 - 0.798 - - - - - 0.741 - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
81. BX322605.2 BX322605.2 75 1.537 - 0.830 - - 0.707 - - - -
82. nprl3 ENSDARG00000010918 339 1.531 0.786 - - - - - 0.745 - - NPR3-like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-1348]
83. nsdhl ENSDARG00000099315 63 1.53 - 0.798 - - - - 0.732 - - NAD(P) dependent steroid dehydrogenase-like [Source:ZFIN;Acc:ZDB-GENE-050417-163]
84. axdnd1 ENSDARG00000062355 30 1.528 - - - - - - 0.795 - 0.733 axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
85. B3GNT1 B3GNT1 601 1.52 - - - - 0.804 - 0.716 - -
86. zgc:92249 14 1.512 - 0.798 - - - - - 0.714 - zgc:92249
87. CABZ01073380.1 CABZ01073380.1 5 1.503 - 0.798 0.705 - - - - - -
88. si:ch211-113a14.19_2 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 17 1.48 - 0.750 - - - - - 0.730 - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
89. grk4 ENSDARG00000070448 146 1.479 0.741 - - - - - - - 0.738 G protein-coupled receptor kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-1198]
90. angpt2b ENSDARG00000053906 19 1.448 - - - - - - - 0.741 0.707 angiopoietin 2b [Source:ZFIN;Acc:ZDB-GENE-010817-2]
91. zgc:171673 ENSDARG00000102473 256 1.429 - 0.708 - - - - 0.721 - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
92. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
93. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
94. CR854899.1 ENSDARG00000102357 8 1 - - - - - - 1.000 - -
95. CABZ01117474.1 CABZ01117474.1 2 1 - - - - - 1.000 - - -
96. ETS1 ENSDARG00000024431 6 1 - - - - - 1.000 - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
97. grin2cb ENSDARG00000077560 9 1 - - - - 1.000 - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
98. si:ch211-30g3.6 si:ch211-30g3.6 1 1 - - - - - 1.000 - - -
99. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
100. pdcl ENSDARG00000009480 12 1 - - - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]

There are 1709 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA