Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ARHGEF17

Gene Name Gene ID Reads Annotation
ARHGEF17 ENSDARG00000101644 625 Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]










Genes with expression patterns similar to ARHGEF17

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ARHGEF17 ENSDARG00000101644 625 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho guanine nucleotide exchange factor 17 [Source:HGNC Symbol;Acc:HGNC:21726]
2. rapgef1a ENSDARG00000043593 416 1.868 - - 0.952 0.916 - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
3. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 1.852 - 0.907 0.945 - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
4. agfg1b ENSDARG00000019526 472 1.824 - - 0.948 0.876 - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
5. IER2 IER2 604 1.809 - - 0.907 0.902 - - - - -
6. smim7 ENSDARG00000074848 1260 1.806 - 0.915 0.891 - - - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
7. lhfp 700 1.805 - 0.896 0.909 - - - - - - lipoma HMGIC fusion partner
8. pcdh8 ENSDARG00000006467 317 1.795 - - 0.951 - - - 0.844 - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
9. fam83fb ENSDARG00000104188 79 1.785 - 0.901 - - - - 0.884 - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
10. GID4 ENSDARG00000079482 1375 1.771 - 0.891 0.880 - - - - - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
11. TNFRSF14_3 TNFRSF14_3 135 1.766 - 0.911 - - - - 0.855 - -
12. si:dkey-57k17.1 ENSDARG00000104697 442 1.762 - 0.893 - 0.869 - - - - - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
13. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.749 - 0.821 0.928 - - - - - - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
14. klf15 ENSDARG00000091127 1037 1.739 - 0.839 0.900 - - - - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
15. ptprga ENSDARG00000045006 719 1.722 - 0.885 - 0.837 - - - - - protein tyrosine phosphatase, receptor type, g a [Source:ZFIN;Acc:ZDB-GENE-101101-4]
16. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.717 - - 0.935 - - - 0.782 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
17. rnd3b ENSDARG00000007396 881 1.7 - 0.765 0.935 - - - - - - Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]
18. lrrfip2 ENSDARG00000010400 2633 1.678 - 0.844 0.834 - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
19. RAP1A RAP1A 502 1.669 - 0.891 - 0.778 - - - - -
20. map3k7 ENSDARG00000020469 2845 1.664 - 0.754 0.910 - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
21. F8A3 F8A3 646 1.659 - - 0.949 - - 0.710 - - -
22. HUS1 ENSDARG00000101611 187 1.657 - 0.884 - - - - 0.773 - - HUS1 checkpoint clamp component [Source:HGNC Symbol;Acc:HGNC:5309]
23. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.657 - 0.928 - 0.729 - - - - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
24. zgc:171497 ENSDARG00000100614 1040 1.655 - - 0.895 - - - 0.760 - - zgc:171497 [Source:ZFIN;Acc:ZDB-GENE-080220-58]
25. bloc1s1 ENSDARG00000014171 597 1.646 - 0.926 - - - 0.720 - - - biogenesis of lysosomal organelles complex-1, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050208-569]
26. stambpb ENSDARG00000086906 265 1.645 - - - - - 0.776 0.869 - - STAM binding protein b [Source:ZFIN;Acc:ZDB-GENE-051127-31]
27. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.637 - - 0.845 0.792 - - - - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
28. CABZ01080492.1 CABZ01080492.1 495 1.636 - 0.883 - - - - 0.753 - -
29. inpp4b ENSDARG00000075201 267 1.619 - - 0.918 0.701 - - - - - inositol polyphosphate-4-phosphatase type II B [Source:ZFIN;Acc:ZDB-GENE-090312-97]
30. irs1 ENSDARG00000054087 1809 1.617 - 0.861 - 0.756 - - - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
31. strada ENSDARG00000037929 1614 1.606 - - 0.883 - - - 0.723 - - ste20-related kinase adaptor alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6482]
32. cdkn2c ENSDARG00000057610 179 1.602 - 0.902 - - - - 0.700 - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
33. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.601 - - - - - 0.758 0.843 - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
34. si:ch211-120e1.6 si:ch211-120e1.6 292 1.599 - 0.869 - 0.730 - - - - -
35. TP53BP1 ENSDARG00000079000 997 1.595 - 0.838 - - - - 0.757 - - tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
36. fbxo25 ENSDARG00000075172 153 1.58 - 0.861 - - - 0.719 - - - F-box protein 25 [Source:ZFIN;Acc:ZDB-GENE-040801-19]
37. ftr67 ENSDARG00000098820 611 1.576 - 0.851 - 0.725 - - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
38. soga1 ENSDARG00000063075 1066 1.574 - - - - - 0.840 0.734 - - suppressor of glucose, autophagy associated 1 [Source:ZFIN;Acc:ZDB-GENE-090313-188]
39. hoxc11a ENSDARG00000070351 1783 1.571 - - 0.787 - - - 0.784 - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
40. SLC5A6 SLC5A6 179 1.553 - - - 0.723 - - 0.830 - -
41. LIMD2 ENSDARG00000078092 3414 1.552 - 0.836 - 0.716 - - - - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
42. gpatch11 ENSDARG00000026892 1360 1.547 - - 0.846 - - - 0.701 - - G patch domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040718-89]
43. mdm4 ENSDARG00000057513 1954 1.545 - 0.702 0.843 - - - - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
44. BX664622.1 ENSDARG00000101754 39 1.54 - - - - - 0.736 0.804 - -
45. znf710a ENSDARG00000014680 582 1.539 - 0.815 - - - - 0.724 - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
46. mbpb ENSDARG00000089413 3334 1.531 - 0.733 0.798 - - - - - - myelin basic protein b [Source:ZFIN;Acc:ZDB-GENE-030429-21]
47. wif1 ENSDARG00000005541 1689 1.53 - 0.780 0.750 - - - - - - wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
48. cry1a cry1a 738 1.528 - 0.728 - - - - 0.800 - -
49. pak4 ENSDARG00000018110 1962 1.524 - 0.718 - 0.806 - - - - - p21 protein (Cdc42/Rac)-activated kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040704-69]
50. kif23 ENSDARG00000014943, ENSDARG00000116561 845 1.52 - 0.750 - - - - 0.770 - - kinesin family member 23 [Source:ZFIN;Acc:ZDB-GENE-991019-4]
51. faah2a ENSDARG00000008457, ENSDARG00000112163 87 1.516 - - - - - 0.767 0.749 - - fatty acid amide hydrolase 2a [Source:ZFIN;Acc:ZDB-GENE-040718-453]
52. CABZ01079427.1 CABZ01079427.1 1682 1.514 - 0.778 - 0.736 - - - - -
53. si:ch73-269m14.4 ENSDARG00000086612 20 1.511 - - - - - 0.701 0.810 - - si:ch73-269m14.4 [Source:ZFIN;Acc:ZDB-GENE-120215-94]
54. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 1.511 - 0.740 0.771 - - - - - - vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
55. nol6 ENSDARG00000059711, ENSDARG00000115621 853 1.481 - - - - - 0.712 0.769 - - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
56. CACNG4 CACNG4 123 1.461 - - - 0.729 - - 0.732 - -
57. ubp1 ENSDARG00000018000 1047 1.457 - - - - - - 0.748 - 0.709 upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
58. tnpo2 ENSDARG00000038239 2469 1.431 - - 0.712 - - - 0.719 - - transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
59. kptn ENSDARG00000015937, ENSDARG00000111197 290 1.417 - - - 0.713 - - 0.704 - - kaptin (actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-040801-258]
60. FBLN1 ENSDARG00000103311 877 0.965 - - 0.965 - - - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
61. CABZ01073032.1 CABZ01073032.1 125 0.964 - - 0.964 - - - - - -
62. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.963 - - 0.963 - - - - - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
63. zgc:113265 318 0.962 - - 0.962 - - - - - - zgc:113265, transcript variant X3
64. CABZ01113061.1 CABZ01113061.1 51 0.96 - - 0.960 - - - - - -
65. CR942805.1 CR942805.1 94 0.96 - - 0.960 - - - - - -
66. zfyve21 ENSDARG00000027887 1687 0.96 - - 0.960 - - - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
67. zgc:158260 ENSDARG00000101703 103 0.96 - - 0.960 - - - - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
68. CMTM8 CMTM8 71 0.96 - - 0.960 - - - - - -
69. msgn1 ENSDARG00000070546 188 0.96 - - 0.960 - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
70. RNase_MRP RNase_MRP 118 0.96 - - 0.960 - - - - - -
71. CABZ01073174.1 CABZ01073174.1 581 0.959 - - 0.959 - - - - - -
72. CAMSAP2 CAMSAP2 109 0.959 - - 0.959 - - - - - -
73. inpp5e ENSDARG00000103926 567 0.959 - - 0.959 - - - - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
74. wdr66 ENSDARG00000059855 276 0.959 - - 0.959 - - - - - - WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
75. brf1a ENSDARG00000017835 206 0.959 - - 0.959 - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
76. CU571255.1 CU571255.1 902 0.959 - - 0.959 - - - - - -
77. map3k10 ENSDARG00000055672 284 0.958 - - 0.958 - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
78. slc35c1 ENSDARG00000104669 65 0.958 - - 0.958 - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
79. wnt5b ENSDARG00000102464 1662 0.958 - - 0.958 - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
80. il2rb ENSDARG00000075720 116 0.957 - - 0.957 - - - - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
81. BX649554.3_1 BX649554.3_1 1071 0.957 - - 0.957 - - - - - -
82. TRIM14_6 TRIM14_6 342 0.957 - - 0.957 - - - - - -
83. ndst2b ENSDARG00000060678 453 0.957 - - 0.957 - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
84. ATF6B 960 0.957 - - 0.957 - - - - - - activating transcription factor 6 beta
85. zgc:66484 ENSDARG00000030478 167 0.956 - - 0.956 - - - - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
86. mphosph10 ENSDARG00000012495 1679 0.955 - - 0.955 - - - - - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
87. mxra5b ENSDARG00000076309 190 0.955 - - 0.955 - - - - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
88. C18H11orf58 C18H11orf58 1293 0.955 - - 0.955 - - - - - -
89. TRAK1 212 0.954 - - 0.954 - - - - - - trafficking protein, kinesin binding 1, transcript variant X6
90. PLA2G3_1 PLA2G3_1 411 0.954 - - 0.954 - - - - - -
91. decr2 ENSDARG00000045257 603 0.954 - 0.954 - - - - - - - 2,4-dienoyl CoA reductase 2, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-040426-2612]
92. TATDN3 ENSDARG00000044072 914 0.953 - - 0.953 - - - - - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
93. GPSM3 GPSM3 257 0.952 - - 0.952 - - - - - -
94. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.952 - - 0.952 - - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
95. zgc:162232 zgc:162232 251 0.952 - 0.952 - - - - - - -
96. DACT3 DACT3 766 0.952 - - 0.952 - - - - - -
97. antxr1c ENSDARG00000063612 3203 0.951 - - 0.951 - - - - - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
98. hoxa9a ENSDARG00000105013 1509 0.951 - - 0.951 - - - - - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
99. rcbtb2 ENSDARG00000090687 1658 0.95 - - 0.950 - - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
100. jag1b ENSDARG00000013168 1002 0.95 - - 0.950 - - - - - - jagged 1b [Source:ZFIN;Acc:ZDB-GENE-011128-4]

There are 1476 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA