Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARHGEF16

Gene Name Gene ID Reads Annotation
ARHGEF16 ENSGALG00000001058 1533 Rho guanine nucleotide exchange factor 16, transcript variant X2











Genes with expression patterns similar to ARHGEF16

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARHGEF16 ENSGALG00000001058 1533 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho guanine nucleotide exchange factor 16, transcript variant X2
2. DONSON ENSGALG00000038649 1338 1.422 - - - - - - 0.705 0.717 - - downstream neighbor of SON [Source:HGNC Symbol;Acc:HGNC:2993]
3. LOC415664 ENSGALG00000001791 2688 0.813 - - - - - - - 0.813 - - uncharacterized oxidoreductase-like, transcript variant X1
4. KIAA1524 ENSGALG00000015360 3527 0.805 - - - - - - - 0.805 - - KIAA1524 [Source:NCBI gene;Acc:418410]
5. PLBD2 ENSGALG00000008319 4047 0.799 - - - - - - - 0.799 - - phospholipase B domain containing 2 [Source:HGNC Symbol;Acc:HGNC:27283]
6. COG2 ENSGALG00000011114 522 0.796 - - - - - - - 0.796 - - component of oligomeric golgi complex 2 [Source:HGNC Symbol;Acc:HGNC:6546]
7. ARMC8 ENSGALG00000040889 2456 0.794 - - - - - - - 0.794 - - armadillo repeat containing 8 [Source:NCBI gene;Acc:424731]
8. ST3GAL6 ENSGALG00000015252 1408 0.785 - - - - - - - 0.785 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:NCBI gene;Acc:395138]
9. GANC ENSGALG00000009036 731 0.785 - - - - - - - 0.785 - - glucosidase alpha, neutral C [Source:NCBI gene;Acc:423232]
10. KCTD12 ENSGALG00000009628, ENSGALG00000033816 764 0.784 - - - - - - - - 0.784 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
11. MCL1 ENSGALG00000044383 6874 0.777 - - - - - - - 0.777 - - Gallus gallus BCL2 family apoptosis regulator (MCL1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001319309]
12. EIF2AK3 ENSGALG00000015958 850 0.772 - - - - - - - 0.772 - - eukaryotic translation initiation factor 2 alpha kinase 3 [Source:HGNC Symbol;Acc:HGNC:3255]
13. NOTCH2 ENSGALG00000002922 3272 0.747 - - - - - - - 0.747 - - notch 2 [Source:NCBI gene;Acc:374031]
14. MLEC ENSGALG00000007102 2880 0.745 - - - - - - - 0.745 - - malectin [Source:HGNC Symbol;Acc:HGNC:28973]
15. ENSGALG00000026802 ENSGALG00000026802 14688 0.739 - - - - - - - 0.739 - -
16. MMD2 ENSGALG00000004530 167 0.738 - - - - - - - 0.738 - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
17. GTF3C2 ENSGALG00000031281 5571 0.734 - - - - - - - 0.734 - - general transcription factor IIIC subunit 2 [Source:HGNC Symbol;Acc:HGNC:4665]
18. FAM221A ENSGALG00000010977 695 0.734 - - - - - - 0.734 - - - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
19. ZNF335 ENSGALG00000041370 4740 0.728 - - - - - - - 0.728 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
20. SLC6A13 ENSGALG00000012985 194 0.726 - - - - - - - 0.726 - - solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
21. MTHFR ENSGALG00000004612 2299 0.726 - - - - - - - 0.726 - - Gallus gallus methylenetetrahydrofolate reductase (MTHFR), mRNA. [Source:RefSeq mRNA;Acc:NM_001328491]
22. FAM172A ENSGALG00000014661 10565 0.725 - - - - - - - 0.725 - - family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
23. RNPEP ENSGALG00000000374 2479 0.725 - - - - - - - 0.725 - - arginyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:10078]
24. HSPB8 ENSGALG00000007383 5333 0.724 - - - - - - - 0.724 - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
25. STRIP2 ENSGALG00000038520 616 0.724 - - - - - - - 0.724 - - striatin interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:22209]
26. BPGM ENSGALG00000013069 4520 0.724 - - - - - - 0.724 - - - bisphosphoglycerate mutase [Source:NCBI gene;Acc:418172]
27. ECM2 ENSGALG00000004695 375 0.722 - - - - - - - 0.722 - - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
28. CIDEA ENSGALG00000034500 405 0.719 - - - - - - - 0.719 - - cell death-inducing DFFA-like effector a [Source:NCBI gene;Acc:768659]
29. LOX ENSGALG00000028063 1488 0.719 - - - - - - - 0.719 - - lysyl oxidase [Source:NCBI gene;Acc:396474]
30. FKBP10 ENSGALG00000025764 7668 0.715 - - - - - - - 0.715 - - FK506 binding protein 10 [Source:HGNC Symbol;Acc:HGNC:18169]
31. CALCOCO2 ENSGALG00000001525 3121 0.715 - - - - - - - 0.715 - - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
32. ACADL ENSGALG00000002891 8058 0.715 - - - - - - - 0.715 - - acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
33. CD9 ENSGALG00000017274 960 0.71 - - - - - - - 0.710 - - CD9 molecule [Source:NCBI gene;Acc:395527]
34. LOC768709 ENSGALG00000017558 5004 0.709 - - - - - - - 0.709 - - uncharacterized LOC768709
35. RAB33B ENSGALG00000009790 2340 0.709 - - - - - - - 0.709 - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
36. EPHB3 ENSGALG00000008537 1843 0.702 - - - - - - - 0.702 - - EPH receptor B3 [Source:HGNC Symbol;Acc:HGNC:3394]
37. CSRP1 ENSGALG00000000318 3702 0.7 - - - - - - - 0.700 - - cysteine and glycine rich protein 1 [Source:NCBI gene;Acc:396176]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA