Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARHGDIB

Gene Name Gene ID Reads Annotation
ARHGDIB ENSGALG00000011738 39492 Rho GDP dissociation inhibitor beta [Source:NCBI gene;Acc:417941]











Genes with expression patterns similar to ARHGDIB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARHGDIB ENSGALG00000011738 39492 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho GDP dissociation inhibitor beta [Source:NCBI gene;Acc:417941]
2. ITM2A ENSGALG00000004107 29262 1.671 - - - - - - 0.861 0.810 - - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
3. CRLS1 ENSGALG00000009214 8652 1.625 - - - - - - 0.736 0.889 - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
4. MRPL15 ENSGALG00000041086 16820 1.578 - - - - - - 0.736 0.842 - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
5. POGLUT1 ENSGALG00000015480 12290 1.576 - - - - - - 0.722 0.854 - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
6. AIMP2 ENSGALG00000003400 12655 1.551 - - - - - - 0.720 0.831 - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
7. MAEA ENSGALG00000013310 13230 1.538 - - - - 0.791 - 0.747 - - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
8. TXNDC17 ENSGALG00000027950 45004 1.477 - - - - - - 0.734 0.743 - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
9. PPA1 ENSGALG00000004442 33355 1.476 - - - - 0.724 - 0.752 - - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
10. NASP ENSGALG00000010255 28423 1.443 - - - - - - 0.715 0.728 - - nuclear autoantigenic sperm protein, transcript variant X3
11. UBR2 ENSGALG00000009906 7717 1.437 - - - - - - 0.701 0.736 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
12. RSU1 ENSGALG00000040891 12561 0.908 - - - - - - 0.908 - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
13. TMED5 27507 0.904 - - - - - - 0.904 - - - transmembrane p24 trafficking protein 5
14. COX5A ENSGALG00000014121 55281 0.889 - - - - - - 0.889 - - - cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
15. TOP1 ENSGALG00000003681 30214 0.877 - - - - - - 0.877 - - - DNA topoisomerase I [Source:NCBI gene;Acc:396004]
16. PPP4R2 ENSGALG00000007810 15127 0.871 - - - - - - 0.871 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
17. RPN2 ENSGALG00000003815 18864 0.866 - - - - - - - 0.866 - - ribophorin II [Source:NCBI gene;Acc:419177]
18. OLA1 ENSGALG00000009325 26414 0.865 - - - - - - 0.865 - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
19. RPA1 ENSGALG00000003072 8023 0.864 - - - - - - - 0.864 - - replication protein A1 [Source:NCBI gene;Acc:417563]
20. CSNK2A1 ENSGALG00000006197 41409 0.863 - - - - - - 0.863 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
21. FAM49B ENSGALG00000036490 7984 0.863 - - - - - - - 0.863 - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
22. ZMAT2 ENSGALG00000041746 23601 0.862 - - - - - - - 0.862 - - zinc finger matrin-type 2 [Source:NCBI gene;Acc:427602]
23. ATP5F1 80590 0.861 - - - - - - 0.861 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
24. ATP5H 53898 0.86 - - - - - - 0.860 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
25. FAM162A ENSGALG00000007378 8290 0.86 - - - - - - - 0.860 - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
26. THOC7 ENSGALG00000007299 38227 0.857 - - - - - - 0.857 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
27. PDCD5 ENSGALG00000004648 22576 0.853 - - - - - - 0.853 - - - programmed cell death 5 [Source:NCBI gene;Acc:415765]
28. HNRNPLL ENSGALG00000008504 14719 0.852 - - - - - - - 0.852 - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
29. RPL22L1 ENSGALG00000009312 59030 0.847 - - - - - - 0.847 - - - ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
30. ABCF2 ENSGALG00000034573 15639 0.844 - - - - - - 0.844 - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
31. DOCK7 6385 0.843 - - - - - - - 0.843 - - dedicator of cytokinesis 7, transcript variant X3
32. AP3S1 ENSGALG00000002341 12388 0.835 - - - - - - - 0.835 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
33. SFPQ ENSGALG00000002514 66832 0.834 - - - - - - 0.834 - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
34. MRPS36 ENSGALG00000014789 7584 0.832 - - - - - - - 0.832 - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
35. ENSGALG00000000514 ENSGALG00000000514 9906 0.832 - - - - - - - 0.832 - -
36. PSMC6 ENSGALG00000012408 52068 0.832 - - - - - - 0.832 - - - proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
37. CXorf56 ENSGALG00000008652 7848 0.832 - - - - - - - 0.832 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
38. NDUFA8 ENSGALG00000040987 49453 0.831 - - - - - - - 0.831 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
39. BPTF ENSGALG00000038222 7521 0.83 - - - - - - - 0.830 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
40. RCC2 ENSGALG00000031684 28067 0.83 - - - - - - - 0.830 - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
41. LMAN2 ENSGALG00000033232 11740 0.83 - - - - - - - 0.830 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
42. WDR36 ENSGALG00000000247 11277 0.829 - - - - - - - 0.829 - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
43. FBXO30 ENSGALG00000041684 3033 0.828 - - - - - - - 0.828 - - F-box protein 30 [Source:HGNC Symbol;Acc:HGNC:15600]
44. SEC31A ENSGALG00000040484 20190 0.826 - - - - - - 0.826 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
45. MGAT4B ENSGALG00000005924 2663 0.825 - - - - - - - 0.825 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
46. MYBBP1A ENSGALG00000001363 10331 0.824 - - - - - - - 0.824 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
47. COPB1 ENSGALG00000006015 16518 0.823 - - - - - - 0.823 - - - coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
48. TGS1 ENSGALG00000015340 5897 0.822 - - - - - - - 0.822 - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
49. EXOSC2 ENSGALG00000040373 24275 0.821 - - - - - - 0.821 - - - exosome component 2 [Source:NCBI gene;Acc:417182]
50. TBCA ENSGALG00000004353 18510 0.817 - - - - - - 0.817 - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
51. STRAP ENSGALG00000013092 13100 0.815 - - - - - - - 0.815 - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
52. CEPT1 ENSGALG00000000142 4219 0.815 - - - - - - - 0.815 - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
53. NFU1 ENSGALG00000030200 6882 0.813 - - - - - - - 0.813 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
54. ACAD9 ENSGALG00000005034 22100 0.812 - - - - - - 0.812 - - - acyl-CoA dehydrogenase family member 9 [Source:NCBI gene;Acc:415974]
55. DYNLT1 ENSGALG00000019979 38176 0.812 - - - - - - 0.812 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
56. TMPO ENSGALG00000011504 14454 0.812 - - - - - - - 0.812 - - thymopoietin [Source:NCBI gene;Acc:417923]
57. ACOT13 ENSGALG00000013632 5550 0.811 - - - - - - - 0.811 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
58. SKA2 ENSGALG00000005090 24296 0.811 - - - - - - 0.811 - - - spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
59. ENSGALG00000028938 ENSGALG00000028938 18616 0.809 - - - - - - 0.809 - - -
60. PMPCB ENSGALG00000008280 6357 0.809 - - - - - - - 0.809 - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
61. GCN1L1 GCN1L1 4601 0.808 - - - - - - - 0.808 - -
62. VCP ENSGALG00000001986 23679 0.805 - - - - - - 0.805 - - - valosin containing protein [Source:NCBI gene;Acc:427410]
63. UPK3BL ENSGALG00000001885 1650 0.803 - - - - - - - 0.803 - - uroplakin 3B-like
64. UBE2E3 ENSGALG00000020793 9517 0.802 - - - - - - - 0.802 - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
65. HSPA9 ENSGALG00000002363 31172 0.8 - - - - - - 0.800 - - - heat shock protein family A (Hsp70) member 9 [Source:NCBI gene;Acc:416183]
66. KLF5 ENSGALG00000016927 1080 0.797 - - - - - - - 0.797 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
67. SSR3 ENSGALG00000028683 24334 0.797 - - - - - - 0.797 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
68. COPG2 ENSGALG00000008144 4542 0.797 - - - - - - - 0.797 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
69. EMG1 ENSGALG00000014568 8102 0.797 - - - - - - - 0.797 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
70. CDC7 ENSGALG00000006051 3996 0.796 - - - - - - - 0.796 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
71. RBF RBF 49711 0.795 - - - - - - 0.795 - - -
72. SIGMAR1 ENSGALG00000028996 12267 0.794 - - - - - - - 0.794 - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
73. OSR2 ENSGALG00000037695 2010 0.793 - - - - - - - 0.793 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
74. SNRNP40 ENSGALG00000000615 32298 0.793 - - - - - - 0.793 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
75. EPRS ENSGALG00000009598 26412 0.791 - - - - - - 0.791 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
76. HSBP1 ENSGALG00000043039 2365 0.791 - - - - - - - 0.791 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
77. MRPS33 ENSGALG00000028879 17966 0.79 - - - - - - 0.790 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
78. CYP51A1 ENSGALG00000009365 6996 0.79 - - - - - - - 0.790 - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]
79. WDFY1 ENSGALG00000005158 2512 0.789 - - - - - - - 0.789 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
80. SFRP2 ENSGALG00000009241 4716 0.789 - - - - - - - 0.789 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
81. WDR11 ENSGALG00000035013 3393 0.788 - - - - - - - 0.788 - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
82. PRDX4 ENSGALG00000016357 32208 0.788 - - - - - - - 0.788 - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
83. AP2A2 ENSGALG00000006799 13874 0.788 - - - - - - 0.788 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
84. FBXO28 ENSGALG00000009331 2871 0.787 - - - - - - - 0.787 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
85. GSPT1 15580 0.786 - - - - - - 0.786 - - - G1 to S phase transition 1, transcript variant X1
86. FAM168B ENSGALG00000002172 12162 0.785 - - - - - - 0.785 - - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
87. TMEM168 ENSGALG00000009443 2452 0.784 - - - - - - - 0.784 - - transmembrane protein 168, transcript variant X1
88. BCAS2 ENSGALG00000002002 22536 0.783 - - - - - - 0.783 - - - breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
89. RANBP1 ENSGALG00000002107 17715 0.783 - - - - - - 0.783 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
90. MRPS21 ENSGALG00000000456 35298 0.783 - - - - - - - 0.783 - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
91. RAB35 ENSGALG00000007308 6300 0.782 - - - - - - - 0.782 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
92. BET1 ENSGALG00000024485 2451 0.782 - - - - - - - 0.782 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
93. YWHAZ ENSGALG00000031387 84985 0.781 - - - - - - 0.781 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
94. CASP3 ENSGALG00000010638 11572 0.781 - - - - - - 0.781 - - - caspase 3 [Source:NCBI gene;Acc:395476]
95. LPAR1 ENSGALG00000015729 3874 0.781 - - - - - - - 0.781 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
96. JARID2 ENSGALG00000012702 4280 0.781 - - - - - - - 0.781 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
97. ELK3 ENSGALG00000043701 7881 0.78 - - - - - - - 0.780 - - ELK3, ETS transcription factor [Source:NCBI gene;Acc:417919]
98. IDH1 ENSGALG00000008818 17613 0.779 - - - - - - - 0.779 - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
99. DFFA ENSGALG00000002820 2046 0.779 - - - - - - - 0.779 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
100. USP54 ENSGALG00000005232 2749 0.778 - - - - - - - 0.778 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]

There are 324 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA