Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ARFGEF1

Gene Name Gene ID Reads Annotation
ARFGEF1 ENSGALG00000034610 238 ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]











Genes with expression patterns similar to ARFGEF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ARFGEF1 ENSGALG00000034610 238 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
2. TTLL7 ENSGALG00000008850 49 1.678 - - - - - 0.797 - 0.881 - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
3. gga-mir-125b gga-mir-125b 146 1.601 - - - - 0.716 - - 0.885 - -
4. TCP11L2 ENSGALG00000012658 1671 1.585 - - 0.872 - 0.713 - - - - - t-complex 11 like 2 [Source:NCBI gene;Acc:425052]
5. SMAD7A SMAD7A 78 1.504 - - - - 0.762 0.742 - - - -
6. SNORD35 SNORD35 366 1.495 - - - - 0.756 0.739 - - - -
7. C1H11ORF70 ENSGALG00000017189 395 1.489 - - 0.742 - 0.747 - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
8. BMP7 ENSGALG00000007668 6645 1.442 - - 0.741 - 0.701 - - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
9. HPS3 ENSGALG00000040089 44 0.931 - - 0.931 - - - - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
10. AFG3L2 ENSGALG00000013853 1138 0.917 - - 0.917 - - - - - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
11. PRKCE ENSGALG00000010000 99 0.909 - - 0.909 - - - - - - - protein kinase C epsilon, transcript variant X1
12. TSPAN14 ENSGALG00000002414 69 0.904 - - 0.904 - - - - - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
13. AZI2 ENSGALG00000011428 24 0.898 - - - - - - - 0.898 - - 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
14. NUAK1 ENSGALG00000012662 411 0.897 - - - - 0.897 - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
15. CLEC3B ENSGALG00000030969 363 0.895 - - 0.895 - - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
16. ST8SIA1 ENSGALG00000013211 14 0.89 - - - - 0.890 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
17. CDH6 ENSGALG00000012917 17 0.89 - - - - 0.890 - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
18. BTBD19 ENSGALG00000028978 20 0.89 - - - - 0.890 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
19. C9orf171 C9orf171 35 0.889 - - - - 0.889 - - - - -
20. MAPK8 ENSGALG00000006109 51 0.888 - - - - - - - 0.888 - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
21. KLF6 ENSGALG00000033178 679 0.886 - - 0.886 - - - - - - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
22. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.884 - - 0.884 - - - - - - - pseudouridylate synthase-like 1, transcript variant X8
23. AGMO ENSGALG00000010792 76 0.882 - - - - 0.882 - - - - - alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
24. PCID2 ENSGALG00000016831 57 0.881 - - - - - 0.881 - - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]
25. SORCS3 ENSGALG00000008434 136 0.881 - - - - 0.881 - - - - - sortilin related VPS10 domain containing receptor 3 [Source:HGNC Symbol;Acc:HGNC:16699]
26. DUS4L ENSGALG00000023661 29 0.881 - - - - - - - 0.881 - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
27. CCDC28B ENSGALG00000003241 459 0.881 - - - - - - - 0.881 - - coiled-coil domain containing 28B [Source:NCBI gene;Acc:419647]
28. DCBLD1 ENSGALG00000014907 19 0.881 - - - - - - - 0.881 - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
29. uc uc 37 0.881 - - - - - - - 0.881 - -
30. IL15RA ENSGALG00000008153 3 0.881 - - - - - - - 0.881 - - interleukin 15 receptor, alpha, transcript variant X2
31. ZHX1 ENSGALG00000034999 21 0.881 - - - - - - - 0.881 - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
32. AGO2 ENSGALG00000040957 25 0.881 - - - - - - - 0.881 - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
33. EHF ENSGALG00000007817 11 0.881 - - - - - - - 0.881 - - ETS homologous factor [Source:NCBI gene;Acc:425791]
34. FAM167B ENSGALG00000003301 11 0.881 - - - - - - - 0.881 - - family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
35. IL6 ENSGALG00000010915 8 0.881 - - - - - - - 0.881 - - interleukin 6 [Source:NCBI gene;Acc:395337]
36. CLGN ENSGALG00000009826 54 0.88 - - - - 0.880 - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
37. LCAT ENSGALG00000028928 484 0.879 - - - - 0.879 - - - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
38. LEO1 ENSGALG00000004696 111 0.878 - - - - - - - 0.878 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
39. ENSGALG00000015097 ENSGALG00000015097 93 0.877 - - - - 0.877 - - - - -
40. ZBBX ENSGALG00000028207 59 0.875 - - - - - - - 0.875 - - zinc finger B-box domain containing, transcript variant X5
41. LAPTM5 ENSGALG00000038636 18 0.873 - - - - 0.873 - - - - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
42. RCAN1 ENSGALG00000016014 95 0.873 - - 0.873 - - - - - - - regulator of calcineurin 1 [Source:NCBI gene;Acc:418510]
43. SLC16A4 ENSGALG00000000417 168 0.872 - - - - - - - 0.872 - - solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]
44. NMRK2 ENSGALG00000025751 57 0.872 - - - - 0.872 - - - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
45. ANO3 ENSGALG00000013311 16 0.872 - - - - - - - 0.872 - - anoctamin 3 [Source:NCBI gene;Acc:422968]
46. DIO1 ENSGALG00000010736 87 0.87 - - - - 0.870 - - - - - iodothyronine deiodinase 1 [Source:NCBI gene;Acc:395940]
47. CERKL ENSGALG00000008910 70 0.867 - - - - 0.867 - - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
48. ENSGALG00000020578 ENSGALG00000020578 25 0.866 - - - - - - - 0.866 - -
49. SNORD2 SNORD2 51 0.865 - - - - - - - 0.865 - -
50. UBE2O ENSGALG00000001971 77 0.865 - - - - - - - 0.865 - - ubiquitin conjugating enzyme E2 O [Source:HGNC Symbol;Acc:HGNC:29554]
51. CFTR ENSGALG00000032986 424 0.865 - - - - - - - 0.865 - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
52. CCNA1 ENSGALG00000017052 23 0.864 - - - - - 0.864 - - - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
53. ALPI ENSGALG00000023866 19 0.863 - - - - 0.863 - - - - - alkaline phosphatase, intestinal, transcript variant X2
54. SIK2 ENSGALG00000036873 7 0.862 - - - - - - - 0.862 - - salt inducible kinase 2 [Source:HGNC Symbol;Acc:HGNC:21680]
55. ARL16 49 0.862 - - - - - - - 0.862 - - ADP ribosylation factor like GTPase 16, transcript variant X1
56. ZNF148 ENSGALG00000012049 365 0.862 - - 0.862 - - - - - - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
57. LHFP 167 0.86 - - - - 0.860 - - - - - lipoma HMGIC fusion partner
58. MSL2 ENSGALG00000039294 55 0.86 - - - - - - - 0.860 - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
59. MMP23B ENSGALG00000001392 53 0.859 - - - - 0.859 - - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
60. KIDINS220 ENSGALG00000016409 854 0.858 - - 0.858 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
61. RASA1 ENSGALG00000017706 224 0.855 - - - - - - - 0.855 - - RAS p21 protein activator 1
62. EMP1 ENSGALG00000011803 351 0.854 - - - - 0.854 - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
63. FANCB ENSGALG00000016569 1193 0.853 - - 0.853 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
64. SMCR8 ENSGALG00000024082 44 0.853 - - - - 0.853 - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
65. ADCK2 ENSGALG00000012863 906 0.852 - - 0.852 - - - - - - - aarF domain containing kinase 2 [Source:HGNC Symbol;Acc:HGNC:19039]
66. DGKE ENSGALG00000003131 17 0.851 - - - - - - - 0.851 - - diacylglycerol kinase epsilon [Source:HGNC Symbol;Acc:HGNC:2852]
67. ENSGALG00000026422 ENSGALG00000026422 34 0.846 - - - - - - - 0.846 - -
68. ZNF341 ENSGALG00000002968 1028 0.844 - - 0.844 - - - - - - - zinc finger protein 341 [Source:NCBI gene;Acc:419152]
69. SFMBT2 ENSGALG00000009279 125 0.844 - - - - - - - 0.844 - - Scm like with four mbt domains 2 [Source:HGNC Symbol;Acc:HGNC:20256]
70. LCA5 ENSGALG00000015878 160 0.842 - - - - - - - 0.842 - - LCA5, lebercilin [Source:HGNC Symbol;Acc:HGNC:31923]
71. GRM1 ENSGALG00000012297 41 0.842 - - - - 0.842 - - - - - glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593]
72. NMNAT1 ENSGALG00000043318 471 0.839 - - 0.839 - - - - - - - nicotinamide nucleotide adenylyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:17877]
73. MOK ENSGALG00000011366 85 0.839 - - 0.839 - - - - - - - MOK protein kinase [Source:HGNC Symbol;Acc:HGNC:9833]
74. IWS1 ENSGALG00000001803 2305 0.838 - - - - 0.838 - - - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
75. PROCR ENSGALG00000006547 645 0.838 - - - - - - - 0.838 - - protein C receptor [Source:NCBI gene;Acc:424867]
76. PQLC3 ENSGALG00000016449 39 0.838 - - - - - - - 0.838 - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
77. ASTN1 ENSGALG00000004472 855 0.837 - - - - - - - 0.837 - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
78. GALNT11 ENSGALG00000006233 210 0.836 - - 0.836 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
79. DCLK1 ENSGALG00000041263 40 0.836 - - - - 0.836 - - - - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
80. HEXDCL ENSGALG00000005861 172 0.835 - - - - - - 0.835 - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing-like, transcript variant X10
81. EML5 ENSGALG00000010639 25 0.833 - - 0.833 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
82. C4orf19 ENSGALG00000027885 305 0.833 - - - - - - - 0.833 - - chromosome 4 open reading frame 19 [Source:HGNC Symbol;Acc:HGNC:25618]
83. DUSP11 DUSP11 765 0.832 - - - - - - - 0.832 - -
84. CREB3 ENSGALG00000002523 23 0.832 - - 0.832 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
85. AHR2 ENSGALG00000023742 21 0.831 - - 0.831 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
86. ATXN3 ENSGALG00000010766 48 0.829 - - 0.829 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
87. FAM3B ENSGALG00000016140 111 0.828 - - 0.828 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
88. LLGL1 ENSGALG00000014408 15 0.828 - - 0.828 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
89. C15orf60 C15orf60 16 0.827 - - 0.827 - - - - - - -
90. TIGD3 TIGD3 36 0.827 - - - - 0.827 - - - - -
91. OTOA ENSGALG00000007070 94 0.826 - - 0.826 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
92. DNALI1 ENSGALG00000001996 64 0.826 - - 0.826 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
93. KPNA5 ENSGALG00000014937 28 0.826 - - 0.826 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
94. TOX3 ENSGALG00000034649 54 0.823 - - 0.823 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
95. COG2 ENSGALG00000011114 522 0.822 - - - - 0.822 - - - - - component of oligomeric golgi complex 2 [Source:HGNC Symbol;Acc:HGNC:6546]
96. HSP70 HSP70 986 0.82 - - 0.820 - - - - - - -
97. RAB11FIP1 41 0.82 - - 0.820 - - - - - - - RAB11 family interacting protein 1, transcript variant X2
98. DYDC1 ENSGALG00000002432 54 0.819 - - - - 0.819 - - - - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
99. FSCN2 ENSGALG00000023354 13 0.819 - - 0.819 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
100. PHTF2 ENSGALG00000008335 722 0.819 - - 0.819 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]

There are 295 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA