Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ARFGAP1

Gene Name Gene ID Reads Annotation
ARFGAP1 ENSDARG00000101616 2952 ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]










Genes with expression patterns similar to ARFGAP1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ARFGAP1 ENSDARG00000101616 2952 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
2. mllt10 ENSDARG00000045401 7557 2.496 - - - 0.990 - 0.731 0.775 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
3. vdac1 ENSDARG00000045132 8051 2.404 - 0.859 - 0.831 - - 0.714 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
4. ammecr1 ENSDARG00000012892 14475 2.384 - - 0.930 - - 0.734 0.720 - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
5. RNF38 ENSDARG00000062055 3901 2.317 - 0.731 - - - 0.816 0.770 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
6. ZNF628 1104 1.883 - 0.886 - 0.997 - - - - - zinc finger protein 628, transcript variant X3
7. atat1 ENSDARG00000004472 700 1.863 - - - 0.997 - 0.866 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
8. znf710a ENSDARG00000014680 582 1.856 - 0.974 - - - 0.882 - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
9. zdhhc6 ENSDARG00000075721 1494 1.847 - 0.895 0.952 - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
10. kdsr ENSDARG00000012021 1560 1.841 - 0.847 - 0.994 - - - - - 3-ketodihydrosphingosine reductase [Source:ZFIN;Acc:ZDB-GENE-040426-853]
11. DACT3_1 DACT3_1 1235 1.81 - - 0.950 - - 0.860 - - -
12. nin ENSDARG00000060298 1558 1.806 - - - 0.995 - 0.811 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
13. arhgap11a ENSDARG00000100019 1642 1.793 - 0.918 - - - 0.875 - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
14. zic5 ENSDARG00000016022 1034 1.787 - 0.888 - - - 0.899 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
15. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.755 - - - 0.987 - - 0.768 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
16. sepw2a 8597 1.75 - - 0.932 - - 0.818 - - - selenoprotein W, 2a
17. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.744 - - 0.904 - - 0.840 - - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
18. htr2cl1 ENSDARG00000018228, ENSDARG00000113913 131 1.733 0.937 - - - - 0.796 - - - 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1 [Source:ZFIN;Acc:ZDB-GENE-081104-48]
19. ca16b ENSDARG00000060123 389 1.731 - 0.886 - - - 0.845 - - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
20. GSG2 GSG2 1162 1.731 - - 0.950 - - 0.781 - - -
21. napa napa 4444 1.73 - - - 0.993 - - 0.737 - -
22. hadhb ENSDARG00000102055 9700 1.728 - - - 0.985 - - 0.743 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
23. xkr6 xkr6 286 1.727 - - - - 0.850 0.877 - - -
24. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.723 - - - 0.981 - - 0.742 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
25. TRIM35_7 TRIM35_7 22 1.721 0.828 - - - 0.893 - - - -
26. lmnb1 ENSDARG00000044299 9817 1.718 - - - 0.968 - - 0.750 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
27. med30 ENSDARG00000101115 133 1.715 0.800 0.915 - - - - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
28. rcc1 ENSDARG00000037158 1165 1.714 - - - 0.996 - 0.718 - - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
29. taf10 ENSDARG00000068641 3333 1.706 - - - 0.989 - - 0.717 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
30. ptgs2a ENSDARG00000004539 1207 1.704 - 0.808 - - - 0.896 - - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
31. piezo1 ENSDARG00000076870 4704 1.704 - 0.710 - 0.994 - - - - - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
32. KCTD14 ENSDARG00000110240 122 1.701 - 0.879 - - - 0.822 - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
33. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.697 - - 0.944 - - 0.753 - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
34. gpx4b ENSDARG00000076836 8085 1.696 - - - 0.975 - - 0.721 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
35. stip1 ENSDARG00000004906 7742 1.694 - - 0.933 - - - 0.761 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
36. rac3b ENSDARG00000020795 1523 1.69 - 0.898 - - - 0.792 - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
37. ARHGAP23 ARHGAP23 3946 1.686 - 0.934 - - - 0.752 - - -
38. esm1 ENSDARG00000104370 186 1.684 - 0.911 - - - 0.773 - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
39. sncb ENSDARG00000104945 8197 1.684 - - - 0.984 - 0.700 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
40. rps17 ENSDARG00000104011 27028 1.681 - - 0.772 0.909 - - - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
41. msxc msxc 3142 1.681 - - 0.945 - - 0.736 - - -
42. prelid1b ENSDARG00000044169 501 1.674 - 0.853 - - - 0.821 - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
43. hmgb2b ENSDARG00000053990 11519 1.664 - - - 0.941 - - 0.723 - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
44. btg2 ENSDARG00000020298 6616 1.658 - - 0.926 - - 0.732 - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
45. kpnb3 ENSDARG00000040245 7967 1.654 - - 0.924 - - - 0.730 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
46. unc119b ENSDARG00000044362 1528 1.652 - - 0.911 - - 0.741 - - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
47. NRBP2 NRBP2 127 1.649 - 0.888 - - - 0.761 - - -
48. GANAB_2 GANAB_2 3210 1.645 - - 0.813 - - 0.832 - - -
49. clic4 ENSDARG00000022995 6064 1.641 - - 0.935 - - 0.706 - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
50. tle2 5014 1.64 - - 0.936 - - - 0.704 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
51. TGIF2 TGIF2 22 1.639 0.828 - - - - - - 0.811 -
52. KCNS1 KCNS1 24 1.637 0.828 - - - - 0.809 - - -
53. hdgfrp2 7462 1.634 - - 0.877 - - 0.757 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
54. psma1 ENSDARG00000101560 5390 1.629 - - 0.899 - - - 0.730 - - proteasome subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-040801-15]
55. cox6c ENSDARG00000038577 16845 1.629 - - - 0.923 - - 0.706 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
56. C18H16orf70 C18H16orf70 542 1.626 - 0.903 - - - 0.723 - - -
57. nfyal ENSDARG00000001621 521 1.619 - 0.902 - - - 0.717 - - - nuclear transcription factor Y, alpha, like [Source:ZFIN;Acc:ZDB-GENE-040718-491]
58. rsrc2 ENSDARG00000042534 1756 1.607 - 0.825 - - - - 0.782 - - arginine/serine-rich coiled-coil 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2457]
59. parp6a ENSDARG00000042703 112 1.606 0.755 - - - - 0.851 - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
60. fam43a ENSDARG00000043009 792 1.601 - 0.892 - - - 0.709 - - - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
61. dlgap4a ENSDARG00000060849 1813 1.599 - 0.793 - - - 0.806 - - - discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
62. gpsm1b ENSDARG00000054874 1308 1.597 - - - - - 0.838 0.759 - - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
63. si:ch211-212g7.6 ENSDARG00000079369 707 1.594 - 0.759 - - - 0.835 - - - si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
64. sf1 ENSDARG00000008188 5142 1.593 - - - - - 0.824 0.769 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
65. usp1 ENSDARG00000056414 1816 1.588 - 0.812 - - - 0.776 - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
66. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.586 - - 0.878 - - - 0.708 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
67. sppl2 ENSDARG00000030448 1040 1.583 - 0.792 - - - 0.791 - - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
68. h2afy2_1 ENSDARG00000087897 9887 1.582 - - - - - 0.857 0.725 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
69. CR387996.1 ENSDARG00000097774 3037 1.58 - - - - - 0.838 0.742 - -
70. psmd8 ENSDARG00000020454 6645 1.574 - 0.733 - - - - 0.841 - - proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
71. u2af2b ENSDARG00000011740 6946 1.569 - 0.747 - - - - 0.822 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
72. cib1 ENSDARG00000103118 291 1.565 - 0.854 - - - 0.711 - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
73. PARD3B PARD3B 401 1.559 - 0.826 - - - 0.733 - - -
74. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.548 - 0.799 - - - - 0.749 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
75. arid1aa ENSDARG00000101710 3644 1.545 - 0.810 - - - 0.735 - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
76. bub1bb ENSDARG00000074927 1667 1.544 - 0.721 - - - 0.823 - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
77. sumo3a ENSDARG00000028119 13447 1.541 - - - - - 0.838 0.703 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
78. psat1 ENSDARG00000016733 8084 1.541 - 0.790 - - - - 0.751 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
79. smad7 ENSDARG00000016858 1660 1.537 - 0.784 - - - 0.753 - - - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
80. dctn4 ENSDARG00000023988 860 1.535 - 0.792 - - - 0.743 - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
81. mad2l1 ENSDARG00000004713 3398 1.534 - 0.765 - - - 0.769 - - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
82. st6galnac4 ENSDARG00000100804 583 1.532 - 0.783 - - - 0.749 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-6]
83. TNKS TNKS 2775 1.531 - - - - - 0.806 0.725 - -
84. gtf2f2a ENSDARG00000069910 1027 1.529 - 0.795 - - - - 0.734 - - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
85. vps39 ENSDARG00000074471 684 1.529 - 0.706 - - - 0.823 - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
86. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.526 - 0.814 - - - 0.712 - - - RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
87. casc3 ENSDARG00000029911 1174 1.518 - 0.799 - - - 0.719 - - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
88. TNRC6B ENSDARG00000074161 2464 1.515 - - - - - 0.738 0.777 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
89. GATAD2B ENSDARG00000005834 3855 1.51 - - - - - 0.737 0.773 - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
90. psma2 ENSDARG00000040121 2504 1.498 - 0.714 - - - - 0.784 - - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
91. drg1 ENSDARG00000039345 7545 1.493 - - - - - 0.724 0.769 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
92. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 1.489 - - 0.759 - - 0.730 - - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
93. tmem2 2572 1.488 - - - - - 0.787 0.701 - - transmembrane protein 2, transcript variant X1
94. sf3b3_1 ENSDARG00000103553 1191 1.488 - 0.716 - - - 0.772 - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
95. ylpm1 ENSDARG00000043680 7676 1.488 - 0.768 - - - - 0.720 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
96. SNRPG ENSDARG00000099667 18697 1.483 - - 0.748 - - - 0.735 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
97. psma4 ENSDARG00000045928 5112 1.479 - - - - - 0.755 0.724 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
98. si:dkey-51a16.9 ENSDARG00000039483 444 1.476 - - - - - 0.747 0.729 - - si:dkey-51a16.9 [Source:ZFIN;Acc:ZDB-GENE-030616-560]
99. TNPO2 ENSDARG00000042887 2290 1.474 - 0.735 - - - 0.739 - - - transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
100. nedd8 ENSDARG00000007989 3896 1.468 - 0.756 - - - - 0.712 - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]

There are 2350 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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