Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APTX

Gene Name Gene ID Reads Annotation
APTX ENSGALG00000001954 692 aprataxin [Source:NCBI gene;Acc:395173]











Genes with expression patterns similar to APTX

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. APTX ENSGALG00000001954 692 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 aprataxin [Source:NCBI gene;Acc:395173]
2. BBX ENSGALG00000015353 1281 1.856 - - 0.959 - 0.897 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
3. AASDHPPT ENSGALG00000027981 1017 1.845 - - 0.966 - 0.879 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
4. YBX3 ENSGALG00000031890 819 1.755 - - 0.923 - - - - 0.832 - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
5. ZNF385D ENSGALG00000011283 2578 1.73 - - 0.888 - 0.842 - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
6. PDIA5 ENSGALG00000011689 6913 1.711 - - 0.864 - 0.847 - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
7. AKTIP ENSGALG00000033378 1991 1.703 - - 0.915 - 0.788 - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
8. LPCAT3 ENSGALG00000014570 7919 1.703 - - 0.911 - 0.792 - - - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
9. ADK ENSGALG00000005057 199 1.692 - - 0.966 - - - - 0.726 - - adenosine kinase [Source:NCBI gene;Acc:423735]
10. MLLT3 ENSGALG00000015078 502 1.689 - - 0.963 - - - - - 0.726 - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
11. CTNS ENSGALG00000004628 1358 1.684 - - 0.959 - - - - - 0.725 - cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]
12. HOXB5 ENSGALG00000034907 3646 1.667 - - 0.901 - - - - 0.766 - - homeobox B5 [Source:NCBI gene;Acc:425096]
13. GTF2E1 ENSGALG00000042320 7712 1.666 - - 0.936 - 0.730 - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
14. MRPS33 ENSGALG00000028879 17966 1.645 - - 0.934 - 0.711 - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
15. FAM171B ENSGALG00000002646 837 1.625 - - 0.714 - 0.911 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
16. ARID3A ENSGALG00000026231 867 1.612 - - 0.897 - - - - - 0.715 - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
17. HCFC2 ENSGALG00000029616 4525 1.563 - - 0.836 - 0.727 - - - - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
18. HEBP1 ENSGALG00000011798, ENSGALG00000011799 2359 1.556 - - - - 0.837 - - - 0.719 - heme binding protein 1 [Source:NCBI gene;Acc:417961]
19. THAP5 ENSGALG00000009494 6540 1.513 - - 0.809 - 0.704 - - - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
20. PAXBP1 ENSGALG00000036833 5573 1.49 - - 0.716 - 0.774 - - - - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
21. BZW2 ENSGALG00000010809 29213 1.487 - - 0.777 - - - - - 0.710 - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
22. AHSA1 ENSGALG00000010463 15252 1.475 - - 0.724 - 0.751 - - - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
23. SOBP ENSGALG00000043047 147 0.983 - - 0.983 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
24. GTF2H2 ENSGALG00000002399 2361 0.975 - - 0.975 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
25. ITGB4 ENSGALG00000002389 44 0.975 - - 0.975 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
26. UEVLD ENSGALG00000006342 164 0.975 - - 0.975 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
27. TDRD6 48 0.975 - - 0.975 - - - - - - - tudor domain containing 6
28. ENSGALG00000028964 ENSGALG00000028964 46 0.975 - - 0.975 - - - - - - -
29. MRC2 ENSGALG00000000461 48 0.975 - - 0.975 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
30. CLEC16A ENSGALG00000007167 66 0.975 - - 0.975 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
31. TUBGCP3 ENSGALG00000016836 332 0.975 - - 0.975 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
32. IFT81 ENSGALG00000003854 2534 0.974 - - 0.974 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
33. SLC3A1 ENSGALG00000009973 608 0.974 - - 0.974 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
34. RQCD1 RQCD1 110 0.974 - - 0.974 - - - - - - -
35. TRIM13 ENSGALG00000017011 92 0.974 - - 0.974 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
36. OSGIN2 ENSGALG00000042840 83 0.974 - - 0.974 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
37. CDC14B ENSGALG00000012627 110 0.974 - - 0.974 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
38. ENSGALG00000004703 ENSGALG00000004703 112 0.973 - - 0.973 - - - - - - -
39. TCTN2 ENSGALG00000023683 3596 0.973 - - 0.973 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
40. SZT2 ENSGALG00000028561 255 0.973 - - 0.973 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
41. BBS5 ENSGALG00000009846 344 0.973 - - 0.973 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
42. U4 U4 69 0.973 - - 0.973 - - - - - - -
43. ENSGALG00000020103 ENSGALG00000020103 64 0.973 - - 0.973 - - - - - - -
44. AKAP10 ENSGALG00000004679 103 0.973 - - 0.973 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
45. MED12 ENSGALG00000036322 814 0.972 - - 0.972 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
46. FBXL5 ENSGALG00000014510 245 0.972 - - 0.972 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
47. ATP10D ENSGALG00000014192 94 0.972 - - 0.972 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
48. GFER ENSGALG00000005579 1367 0.971 - - 0.971 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
49. SMARCAD1 ENSGALG00000037339 149 0.971 - - 0.971 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
50. ENSGALG00000002020 ENSGALG00000002020 183 0.971 - - 0.971 - - - - - - -
51. NXPE3 ENSGALG00000015344 111 0.971 - - 0.971 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
52. PTDSS2 ENSGALG00000004300 682 0.971 - - 0.971 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
53. DBN1 ENSGALG00000033405 216 0.971 - - 0.971 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
54. RAD54L2 ENSGALG00000003243 187 0.97 - - 0.970 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
55. F2R ENSGALG00000014983 106 0.97 - - 0.970 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
56. RPS6KB1 ENSGALG00000005198 169 0.97 - - 0.970 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
57. LRRC71 ENSGALG00000027351 695 0.97 - - 0.970 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
58. ABCC3 ENSGALG00000007522 340 0.969 - - 0.969 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
59. NGF ENSGALG00000002556 122 0.969 - - 0.969 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
60. L3MBTL3 ENSGALG00000034030 113 0.969 - - 0.969 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
61. LRRC42 ENSGALG00000010743 384 0.969 - - 0.969 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
62. ITM2B ENSGALG00000016996 1112 0.968 - - 0.968 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
63. PRUNE PRUNE 452 0.968 - - 0.968 - - - - - - -
64. GDPD4 ENSGALG00000000690 824 0.967 - - 0.967 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
65. DDX6 ENSGALG00000033064 2193 0.966 - - 0.966 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
66. ATF7IP ENSGALG00000011814 1571 0.966 - - 0.966 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
67. NACAD 679 0.966 - - 0.966 - - - - - - - NAC alpha domain containing, transcript variant X1
68. CHAMP1 ENSGALG00000016813 508 0.966 - - 0.966 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
69. FAM134C 860 0.965 - - 0.965 - - - - - - - family with sequence similarity 134 member C
70. MTHFSD ENSGALG00000033322 824 0.965 - - 0.965 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
71. TTPAL ENSGALG00000004244 2734 0.965 - - 0.965 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
72. KCTD3 ENSGALG00000009678 335 0.963 - - 0.963 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
73. RTFDC1 ENSGALG00000007709 1727 0.962 - - 0.962 - - - - - - - replication termination factor 2 domain containing 1 [Source:NCBI gene;Acc:419329]
74. ATP8B4 ENSGALG00000002326 456 0.962 - - 0.962 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
75. SHMT1 ENSGALG00000005046 1430 0.962 - - 0.962 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
76. CHGA ENSGALG00000010820 1028 0.961 - - 0.961 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
77. SMOC2 ENSGALG00000011205 340 0.96 - - 0.960 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
78. AKT3 ENSGALG00000034081 866 0.96 - - 0.960 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
79. SLC37A3 ENSGALG00000012849 836 0.959 - - 0.959 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
80. RFK ENSGALG00000033558 1364 0.958 - - 0.958 - - - - - - - riboflavin kinase, transcript variant X3
81. IFT57 ENSGALG00000015356 5540 0.958 - - 0.958 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
82. RRN3 ENSGALG00000041989 3934 0.956 - - 0.956 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
83. CENPO ENSGALG00000016609 1699 0.956 - - 0.956 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
84. ABCE1 ENSGALG00000009961 958 0.956 - - 0.956 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
85. PCDH17 ENSGALG00000016941 1006 0.956 - - 0.956 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
86. CEP104 ENSGALG00000000978 1130 0.956 - - 0.956 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
87. WHSC1 1712 0.956 - - 0.956 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
88. PCYT1B 190 0.956 - - 0.956 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
89. UHRF2 ENSGALG00000015052 1268 0.955 - - 0.955 - - - - - - - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
90. RECQL ENSGALG00000013174 1323 0.954 - - 0.954 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
91. RALGDS ENSGALG00000003412 4478 0.953 - - 0.953 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
92. SNN ENSGALG00000028876 1687 0.953 - - 0.953 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
93. CA9 ENSGALG00000021340 1431 0.952 - - 0.952 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
94. SGCE ENSGALG00000009670 3070 0.951 - - 0.951 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
95. WDR92 ENSGALG00000008760 3934 0.95 - - 0.950 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
96. HYAL3 ENSGALG00000029000 712 0.949 - - 0.949 - - - - - - - hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
97. TMEM242 ENSGALG00000013689 377 0.949 - - 0.949 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
98. MIB1 ENSGALG00000014974 3583 0.949 - - 0.949 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
99. HPS5 ENSGALG00000027716 2466 0.948 - - 0.948 - - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
100. TEF ENSGALG00000011958 375 0.948 - - - - 0.948 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]

There are 701 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA