Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APP

Gene Name Gene ID Reads Annotation
APP ENSGALG00000015770 9438 amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]











Genes with expression patterns similar to APP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. APP ENSGALG00000015770 9438 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
2. RBM45 ENSGALG00000009202 6057 1.81 - - - - - - 0.999 - 0.811 - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
3. C28H19ORF10 C28H19ORF10 16529 1.809 - - - - - - 0.998 - - 0.811
4. TOPBP1 ENSGALG00000034461 3094 1.719 - - - - - - 0.999 - 0.720 - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
5. CDC42 ENSGALG00000004796 59878 1.628 - - - - - - 0.896 - - 0.732 cell division cycle 42 [Source:NCBI gene;Acc:395917]
6. CTSL2 CTSL2 7966 1.57 - - - - - - - 0.766 - 0.804
7. TFG ENSGALG00000015299 849 1.508 - - - - - - - - 0.740 0.768 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
8. C5orf24 ENSGALG00000006371 1573 1.485 0.716 - - - - - - - - 0.769 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
9. TSPAN12 ENSGALG00000009029 2145 1.474 - - - - - - - - 0.701 0.773 tetraspanin 12 [Source:NCBI gene;Acc:417763]
10. N-RAS N-RAS 5787 1.469 - - - - - - - 0.758 0.711 -
11. RBBP6 ENSGALG00000006043 9708 1.463 0.735 - - - - - - - - 0.728 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
12. CKI CKI 2845 1.439 - - - - - - - 0.706 - 0.733
13. TMED10 ENSGALG00000010318 9317 1.435 - - - - - - - 0.709 - 0.726 transmembrane p24 trafficking protein 10 [Source:NCBI gene;Acc:423362]
14. UGCG ENSGALG00000015682 2735 0.999 - - - - - - 0.999 - - - UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:12524]
15. SLBP ENSGALG00000015712 5586 0.999 - - - - - - 0.999 - - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
16. HSD17B12 ENSGALG00000036787 11748 0.999 - - - - - - 0.999 - - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
17. GALT ENSGALG00000026195 2002 0.999 - - - - - - 0.999 - - - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
18. GATAD2A ENSGALG00000042900 6337 0.999 - - - - - - 0.999 - - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
19. CKAP2 ENSGALG00000017025 25020 0.999 - - - - - - 0.999 - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
20. SMPD3 ENSGALG00000034950 4335 0.999 - - - - - - 0.999 - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
21. CHKA ENSGALG00000036754 5077 0.999 - - - - - - 0.999 - - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
22. IGDCC3 ENSGALG00000007371 2434 0.999 - - - - - - 0.999 - - - immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
23. RBM18 ENSGALG00000028167 10372 0.998 - - - - - - 0.998 - - - RNA binding motif protein 18 [Source:HGNC Symbol;Acc:HGNC:28413]
24. DEPDC1B ENSGALG00000014729 5334 0.998 - - - - - - 0.998 - - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
25. IRF6 ENSGALG00000001405 3144 0.998 - - - - - - 0.998 - - - interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
26. THOC5 ENSGALG00000029223 16069 0.997 - - - - - - 0.997 - - - THO complex 5 [Source:NCBI gene;Acc:417019]
27. RALBP1 ENSGALG00000008405 13780 0.997 - - - - - - 0.997 - - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
28. UTP15 ENSGALG00000013510 13122 0.997 - - - - - - 0.997 - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
29. PLOD2 ENSGALG00000006783 22789 0.996 - - - - - - 0.996 - - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
30. DDX1 ENSGALG00000016461 15157 0.996 - - - - - - 0.996 - - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
31. YWHAE ENSGALG00000002661 37143 0.996 - - - - - - 0.996 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
32. C1D ENSGALG00000008765 14779 0.995 - - - - - - 0.995 - - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
33. DDOST ENSGALG00000010073 18707 0.994 - - - - - - 0.994 - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
34. HECTD3 ENSGALG00000010217 2513 0.994 - - - - - - 0.994 - - - HECT domain E3 ubiquitin protein ligase 3, transcript variant X2
35. LSM7 ENSGALG00000000408 19112 0.987 - - - - - - 0.987 - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
36. BZW2 ENSGALG00000010809 29213 0.983 - - - - - - 0.983 - - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
37. NUDCD2 ENSGALG00000001726 6303 0.978 - - - - - - 0.978 - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
38. NDUFA10 ENSGALG00000004302 41948 0.972 - - - - - - 0.972 - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
39. ASNS ENSGALG00000009748 11822 0.967 - - - - - - 0.967 - - - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
40. RNF7 ENSGALG00000021117 13110 0.954 - - - - - - 0.954 - - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
41. SUGT1 ENSGALG00000016946 22881 0.947 - - - - - - 0.947 - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
42. IDH1 ENSGALG00000008818 17613 0.922 - - - - - - 0.922 - - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
43. SF3B6 ENSGALG00000016501 28236 0.921 - - - - - - 0.921 - - - splicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]
44. SNRK ENSGALG00000039920 174 0.911 - - - - - - - - 0.911 - SNF related kinase [Source:NCBI gene;Acc:420675]
45. GPR180 ENSGALG00000016897 1545 0.903 - - - - - - - - 0.903 - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
46. LACE1 LACE1 74 0.889 - - - - - - - - 0.889 -
47. GSTCD ENSGALG00000010573 1409 0.886 - - - - - - - - 0.886 - glutathione S-transferase C-terminal domain containing [Source:HGNC Symbol;Acc:HGNC:25806]
48. SETX ENSGALG00000003661 701 0.886 - - - - - - - - 0.886 - senataxin [Source:HGNC Symbol;Acc:HGNC:445]
49. GLRX ENSGALG00000027483 217 0.884 - - - - - - - - 0.884 - glutaredoxin [Source:NCBI gene;Acc:396069]
50. ANO1 ENSGALG00000041808 5149 0.881 - - - - - - - - 0.881 - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
51. C14orf79 C14orf79 401 0.881 - - - - - - - - 0.881 -
52. NCOA2 ENSGALG00000036017 256 0.874 - - - - - - - - 0.874 - nuclear receptor coactivator 2, transcript variant X9
53. HAND1 ENSGALG00000035104 2351 0.873 - - - - - - - - 0.873 - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
54. GID8 ENSGALG00000005700 3992 0.871 - - - - - - - - 0.871 - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
55. DNAJB14 ENSGALG00000014026 598 0.868 - - - - - - - - 0.868 - DnaJ heat shock protein family (Hsp40) member B14 [Source:NCBI gene;Acc:426362]
56. FGF12 ENSGALG00000036971 2631 0.865 - - - - - - - - 0.865 - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
57. BNIP3L ENSGALG00000043405 10316 0.865 - - - - - - - 0.865 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
58. RBMS1 ENSGALG00000011132 569 0.859 - - - - - - - - 0.859 - RNA binding motif single stranded interacting protein 1 [Source:NCBI gene;Acc:395880]
59. G6PC2 ENSGALG00000010899 260 0.859 - - - - - - - - 0.859 - glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]
60. HDX ENSGALG00000007041 179 0.858 - - - - - - - - 0.858 - highly divergent homeobox [Source:NCBI gene;Acc:422272]
61. MCEE ENSGALG00000003913 1527 0.858 - - - - - - - 0.858 - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
62. ENSGALG00000026802 ENSGALG00000026802 14688 0.857 - - - - - - - 0.857 - -
63. CIDEC ENSGALG00000026945 718 0.853 - - - - - - - - 0.853 - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
64. VPS51 ENSGALG00000004166 204 0.851 - - - - - - - - 0.851 - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
65. ELN 765 0.849 - - - - - - - - 0.849 - elastin, transcript variant X24
66. MAPK8IP3 ENSGALG00000029514 57 0.849 - - - - - - - - 0.849 - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
67. EIF4EBP1 ENSGALG00000003205 89048 0.848 - - - - - - 0.848 - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
68. CCDC47 ENSGALG00000000564 6584 0.847 - - - - - - - 0.847 - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
69. ELMO3 ENSGALG00000030220 375 0.845 - - - - - - - - 0.845 - engulfment and cell motility 3 [Source:NCBI gene;Acc:100857533]
70. HMGXB3 ENSGALG00000005770 119 0.845 - - - - - - - - 0.845 - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
71. SH3BGRL ENSGALG00000007128 18708 0.844 - - - - - - - 0.844 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
72. ENOX2 ENSGALG00000004079 4055 0.843 - - - - - - - - 0.843 - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
73. C2orf40 ENSGALG00000043690 7790 0.843 - - - - - - - - 0.843 - chromosome 2 open reading frame 40 [Source:HGNC Symbol;Acc:HGNC:24642]
74. KIAA0232 ENSGALG00000015538 717 0.843 - - - - - - - - 0.843 - KIAA0232 [Source:HGNC Symbol;Acc:HGNC:28992]
75. CBX1 ENSGALG00000033926 2436 0.843 - - - - - - - - 0.843 - chromobox 1 [Source:NCBI gene;Acc:374237]
76. HKDC1 ENSGALG00000021039 134 0.841 - - - - - - - - 0.841 - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
77. ENSGALG00000021611 ENSGALG00000021611 1551 0.841 - - - - - - - - 0.841 -
78. HS1BP3 ENSGALG00000016486 380 0.84 - - - - - - - - 0.840 - HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
79. ERO1LB ERO1LB 2910 0.84 - - - - - - - - 0.840 -
80. MT-ND4L MT-ND4L 12537 0.84 - - - - - - - - 0.840 -
81. IFT27 ENSGALG00000042990 221 0.839 - - - - - - - - 0.839 - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
82. WSB2 ENSGALG00000008151 13246 0.838 - - - - - - - 0.838 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
83. FMR1 ENSGALG00000009177 561 0.837 - - - - - - - - 0.837 - fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
84. PTPRU ENSGALG00000031440 1357 0.837 - - - - - - - - 0.837 - protein tyrosine phosphatase, receptor type U [Source:NCBI gene;Acc:395153]
85. SGCE ENSGALG00000009670 3070 0.836 - - - - - - - - 0.836 - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
86. AIDA ENSGALG00000009426 219 0.836 - - - - - - - - 0.836 - axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
87. ANKRD50 ENSGALG00000011831 2870 0.833 - - - - - - - - - 0.833 ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
88. MAP4 36 0.833 - - - - - - - - 0.833 - microtubule associated protein 4, transcript variant X12
89. FILIP1L ENSGALG00000015271 644 0.832 - - - - - - - - 0.832 - filamin A interacting protein 1 like, transcript variant X8
90. RNF152 ENSGALG00000028822 291 0.832 - - - - - - - - 0.832 - ring finger protein 152 [Source:NCBI gene;Acc:420909]
91. ERLIN2 ENSGALG00000003092 18251 0.831 - - - - - - - 0.831 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
92. BMPER ENSGALG00000029811 636 0.83 - - - - - - - - 0.830 - BMP binding endothelial regulator [Source:NCBI gene;Acc:420744]
93. EMP2 ENSGALG00000027058 3925 0.828 - - - - - - - 0.828 - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
94. DAZAP1 ENSGALG00000015200 1731 0.828 - - - - - - - - - 0.828 DAZ associated protein 1 [Source:NCBI gene;Acc:427266]
95. BPHL ENSGALG00000029659 501 0.828 - - - - - - - - 0.828 - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
96. HDHD1 HDHD1 2928 0.826 - - - - - - - - 0.826 -
97. ENSGALG00000011687 ENSGALG00000011687 4553 0.826 - - - - - - - - 0.826 -
98. DNAJC25 ENSGALG00000015684 4554 0.824 - - - - - - 0.824 - - - DnaJ heat shock protein family (Hsp40) member C25
99. NCOA3 ENSGALG00000004570 243 0.824 - - - - - - - - 0.824 - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
100. METRNL ENSGALG00000028354 25565 0.824 - - - - - - - - - 0.824 meteorin like, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:27584]

There are 538 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA