Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APOO

Gene Name Gene ID Reads Annotation
APOO 814 apolipoprotein O, transcript variant X3











Genes with expression patterns similar to APOO

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. APOO 814 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 apolipoprotein O, transcript variant X3
2. KLHL23 ENSGALG00000020737 13 1.477 - - 0.761 - - - - 0.716 - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
3. CRISPLD1 ENSGALG00000033880 64 0.828 - - - - - - 0.828 - - - cysteine rich secretory protein LCCL domain containing 1 [Source:NCBI gene;Acc:395369]
4. UBXN7 ENSGALG00000006385 28 0.828 - - - - - - 0.828 - - - UBX domain protein 7 [Source:HGNC Symbol;Acc:HGNC:29119]
5. TYRO3 ENSGALG00000008631 23 0.81 - - - - - - - 0.810 - - TYRO3 protein tyrosine kinase [Source:NCBI gene;Acc:395336]
6. ADCYAP1R1 ENSGALG00000005223 114 0.792 - - 0.792 - - - - - - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
7. ENSGALG00000028936 ENSGALG00000028936 57 0.787 - - - - 0.787 - - - - -
8. NECAB2 ENSGALG00000003309 134 0.786 - - - - - - - 0.786 - - N-terminal EF-hand calcium binding protein 2 [Source:HGNC Symbol;Acc:HGNC:23746]
9. PPARG ENSGALG00000004974 62 0.78 - - - - - - - 0.780 - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
10. FGF7 ENSGALG00000028158 189 0.779 - - - - 0.779 - - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
11. ATP11C ENSGALG00000006623 163 0.775 - - 0.775 - - - - - - - ATPase phospholipid transporting 11C [Source:HGNC Symbol;Acc:HGNC:13554]
12. NFXL1 ENSGALG00000014138 36 0.77 - - 0.770 - - - - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
13. PNPLA2 ENSGALG00000014569 7 0.769 - - 0.769 - - - - - - - patatin like phospholipase domain containing 2 [Source:NCBI gene;Acc:431066]
14. ENSGALG00000028038 ENSGALG00000028038 9 0.769 - - 0.769 - - - - - - -
15. ADA ENSGALG00000004170 633 0.769 - - 0.769 - - - - - - - adenosine deaminase [Source:NCBI gene;Acc:419194]
16. FBXO16 7 0.768 - - 0.768 - - - - - - - F-box protein 16, transcript variant X1
17. ZDHHC20 ENSGALG00000017126 58 0.768 - - 0.768 - - - - - - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
18. EPHA10 ENSGALG00000001912 5 0.767 - - 0.767 - - - - - - - EPH receptor A10, transcript variant X1
19. SLC6A18 ENSGALG00000013180 6 0.767 - - 0.767 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
20. ENSGALG00000020389 ENSGALG00000020389 5 0.767 - - 0.767 - - - - - - -
21. PTPRH PTPRH 66 0.763 - - - - - - - 0.763 - -
22. ASTL ENSGALG00000037220 2775 0.757 - - 0.757 - - - - - - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
23. AGBL2 ENSGALG00000029618 8 0.752 - - 0.752 - - - - - - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
24. KAZALD1 ENSGALG00000007837 2463 0.75 - - - - - - - 0.750 - - Kazal type serine peptidase inhibitor domain 1 [Source:HGNC Symbol;Acc:HGNC:25460]
25. C1QTNF2 ENSGALG00000027232 42 0.749 - - - - - - - 0.749 - - C1q and tumor necrosis factor related protein 2 [Source:NCBI gene;Acc:416156]
26. ENSGALG00000017269 ENSGALG00000017269 13 0.747 - - 0.747 - - - - - - -
27. ATP2C1 ENSGALG00000034340 32 0.746 - - - - 0.746 - - - - - ATPase secretory pathway Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:13211]
28. MTMR3 ENSGALG00000008051 9 0.746 - - 0.746 - - - - - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
29. AKAP13 ENSGALG00000006840 521 0.745 - - - - - - - 0.745 - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
30. BLVRA ENSGALG00000031786 23 0.742 - - 0.742 - - - - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
31. GPCPD1 ENSGALG00000009130 24 0.742 - - 0.742 - - - - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
32. PDE1C ENSGALG00000039935 16 0.74 - - 0.740 - - - - - - - phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
33. NSUN6 ENSGALG00000008564 9 0.739 - - 0.739 - - - - - - - NOP2/Sun RNA methyltransferase family member 6 [Source:HGNC Symbol;Acc:HGNC:23529]
34. ENOX1 ENSGALG00000016967 1123 0.738 - - 0.738 - - - - - - - ecto-NOX disulfide-thiol exchanger 1 [Source:HGNC Symbol;Acc:HGNC:25474]
35. AKAP6 ENSGALG00000009995 77 0.736 - - 0.736 - - - - - - - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
36. RBM24 ENSGALG00000012712 4138 0.736 - - - - - - - 0.736 - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
37. TMEM61 ENSGALG00000010801 171 0.732 - - 0.732 - - - - - - - transmembrane protein 61 [Source:HGNC Symbol;Acc:HGNC:27296]
38. ADAMTS15 ENSGALG00000001407 11 0.731 - - 0.731 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
39. PRLR ENSGALG00000003446 19 0.731 - - 0.731 - - - - - - - prolactin receptor [Source:NCBI gene;Acc:395660]
40. ENSGALG00000019568 ENSGALG00000019568 25 0.73 - - 0.730 - - - - - - -
41. GTPBP8 ENSGALG00000015190 21 0.73 - - 0.730 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
42. C1orf74 ENSGALG00000001378 39 0.729 - - - - - - - 0.729 - - chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
43. PABPC4 ENSGALG00000003800 199 0.728 - - - - - - 0.728 - - - poly(A) binding protein cytoplasmic 4 [Source:HGNC Symbol;Acc:HGNC:8557]
44. TP53BP1 ENSGALG00000042201 708 0.728 - - 0.728 - - - - - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
45. RASGRP1 ENSGALG00000009740 15 0.728 - - - - - - - 0.728 - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
46. DUSP4 ENSGALG00000011419 720 0.727 - - - - - - 0.727 - - - dual specificity phosphatase 4 [Source:NCBI gene;Acc:395642]
47. AMPH ENSGALG00000032958 111 0.726 - - - - 0.726 - - - - - amphiphysin [Source:NCBI gene;Acc:420761]
48. PLK4 ENSGALG00000010195 514 0.726 - - - - 0.726 - - - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
49. CHRNB4 ENSGALG00000003005 59 0.725 - - - - - - - 0.725 - - cholinergic receptor nicotinic beta 4 subunit [Source:NCBI gene;Acc:395613]
50. C9orf91 C9orf91 629 0.724 - - - - - - - 0.724 - -
51. GLB1L ENSGALG00000011328 223 0.723 - - 0.723 - - - - - - - galactosidase beta 1 like [Source:HGNC Symbol;Acc:HGNC:28129]
52. STAG3 STAG3 34 0.723 - - 0.723 - - - - - - -
53. RNASET2 ENSGALG00000011426 40 0.722 - - 0.722 - - - - - - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
54. MAP7D1 ENSGALG00000021634 457 0.722 - - - - - - - 0.722 - - MAP7 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25514]
55. ZDHHC15 ENSGALG00000007800 24 0.722 - - 0.722 - - - - - - - zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
56. HERPUD1 ENSGALG00000001220 18 0.722 - - 0.722 - - - - - - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
57. MCC ENSGALG00000000208 61 0.721 - - - - - - - 0.721 - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
58. SLITRK2 ENSGALG00000009192 51 0.721 - - 0.721 - - - - - - - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
59. ENSGALG00000006724 ENSGALG00000006724 74 0.721 - - - - - - - 0.721 - -
60. RGMB ENSGALG00000015284 14 0.721 - - 0.721 - - - - - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
61. TSPAN12 ENSGALG00000009029 2145 0.721 - - 0.721 - - - - - - - tetraspanin 12 [Source:NCBI gene;Acc:417763]
62. JPH3 ENSGALG00000029424 65 0.721 - - 0.721 - - - - - - - junctophilin 3 [Source:HGNC Symbol;Acc:HGNC:14203]
63. NME7 ENSGALG00000015230 633 0.72 - - - - 0.720 - - - - - NME/NM23 family member 7 [Source:HGNC Symbol;Acc:HGNC:20461]
64. TSPAN9 ENSGALG00000014346 228 0.72 - - - - - - - 0.720 - - tetraspanin 9 [Source:HGNC Symbol;Acc:HGNC:21640]
65. CA3 CA3 200 0.719 - - - - - - - 0.719 - -
66. LMCD1 ENSGALG00000008349 928 0.718 - - - - - - - 0.718 - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
67. SRGN ENSGALG00000004167 77 0.717 - - - - - - - 0.717 - - serglycin [Source:HGNC Symbol;Acc:HGNC:9361]
68. TRPV1 ENSGALG00000004649 17 0.717 - - - - - - - 0.717 - - transient receptor potential cation channel subfamily V member 1 [Source:NCBI gene;Acc:395259]
69. CDH7 ENSGALG00000013782 11 0.717 - - - - - - - 0.717 - - cadherin 7 [Source:NCBI gene;Acc:374007]
70. FAM184B ENSGALG00000041854 43 0.717 - - - - - - - 0.717 - - family with sequence similarity 184 member B [Source:HGNC Symbol;Acc:HGNC:29235]
71. STON2 ENSGALG00000010579 76 0.717 - - - - - - - 0.717 - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
72. LRRC55 ENSGALG00000029130 21 0.717 - - - - - - - 0.717 - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
73. CCBL1 22 0.716 - - - - - - - 0.716 - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
74. UBE2J1 ENSGALG00000015775 13 0.716 - - - - - - - 0.716 - - ubiquitin conjugating enzyme E2 J1 [Source:NCBI gene;Acc:395528]
75. OGDHL ENSGALG00000002266 57 0.716 - - 0.716 - - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
76. KLHL33 ENSGALG00000027742 18 0.716 - - - - - - - 0.716 - - kelch like family member 33, transcript variant X2
77. ENSGALG00000006003 ENSGALG00000006003 11 0.716 - - - - - - - 0.716 - -
78. PEAK1 ENSGALG00000002759 39 0.716 - - - - - - - 0.716 - - pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
79. AFF1 ENSGALG00000043935 34 0.716 - - - - - - - 0.716 - - AF4/FMR2 family member 1 [Source:HGNC Symbol;Acc:HGNC:7135]
80. KCNK10 ENSGALG00000010598 7 0.716 - - - - - - - 0.716 - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
81. ENSGALG00000003817 ENSGALG00000003817 45 0.716 - - - - - - - 0.716 - -
82. PDZD3 ENSGALG00000006779 24 0.716 - - - - - - - 0.716 - - PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:19891]
83. ENSGALG00000001552 ENSGALG00000001552 4 0.716 - - - - - - - 0.716 - -
84. SNORA50 SNORA50 9 0.716 - - - - - - - 0.716 - -
85. UBOX5 ENSGALG00000035134 1705 0.716 - - 0.716 - - - - - - - U-box domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17777]
86. SOCS1 ENSGALG00000007158 14 0.716 - - - - - - - 0.716 - - suppressor of cytokine signaling 1 [Source:NCBI gene;Acc:416630]
87. ENSGALG00000027180 ENSGALG00000027180 1 0.716 - - - - - - - 0.716 - -
88. ACSS1 ENSGALG00000008632 397 0.716 - - 0.716 - - - - - - - acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
89. ENSGALG00000008449 ENSGALG00000008449 865 0.716 - - - - - - - 0.716 - -
90. PTPN22 ENSGALG00000021656 1 0.716 - - - - - - - 0.716 - - protein tyrosine phosphatase, non-receptor type 22 [Source:HGNC Symbol;Acc:HGNC:9652]
91. FAM180A ENSGALG00000028459 14 0.716 - - - - - - - 0.716 - - family with sequence similarity 180 member A [Source:HGNC Symbol;Acc:HGNC:33773]
92. SMAD6 ENSGALG00000025898 3144 0.715 - - 0.715 - - - - - - - SMAD family member 6 [Source:NCBI gene;Acc:374096]
93. LRRN4 ENSGALG00000008815 481 0.715 - - 0.715 - - - - - - - leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
94. IQGAP2 ENSGALG00000014978 544 0.714 - - - - - - - 0.714 - - IQ motif containing GTPase activating protein 2 [Source:NCBI gene;Acc:427211]
95. HSPH1 ENSGALG00000017077 735 0.713 - - - - - - - - 0.713 - heat shock protein family H (Hsp110) member 1 [Source:NCBI gene;Acc:418917]
96. FAM149A ENSGALG00000013503 72 0.712 - - 0.712 - - - - - - - family with sequence similarity 149 member A [Source:HGNC Symbol;Acc:HGNC:24527]
97. ENSGALG00000026461 ENSGALG00000026461 61 0.712 - - 0.712 - - - - - - -
98. GPR161 ENSGALG00000015247 3473 0.712 - - 0.712 - - - - - - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
99. SVOPL ENSGALG00000012812 27 0.71 - - 0.710 - - - - - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
100. DUS4L ENSGALG00000023661 29 0.707 - - 0.707 - - - - - - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]

There are 10 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA