Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APOE

Gene Name Gene ID Reads Annotation
APOE ENSG00000130203 3263 apolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613]



Genes with expression patterns similar to APOE

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. APOE ENSG00000130203 3263 2 1.000 1.000 apolipoprotein E [Source:HGNC Symbol;Acc:HGNC:613]
2. AHNAK ENSG00000124942 11800 1.526 0.737 0.789 AHNAK nucleoprotein [Source:HGNC Symbol;Acc:HGNC:347]
3. COL1A2 ENSG00000164692 43340 1.505 0.755 0.750 collagen type I alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2198]
4. ITGA8 ENSG00000077943 1889 1.419 0.705 0.714 integrin subunit alpha 8 [Source:HGNC Symbol;Acc:HGNC:6144]
5. DPP4 ENSG00000197635 430 0.889 0.889 - dipeptidyl peptidase 4 [Source:HGNC Symbol;Acc:HGNC:3009]
6. KCTD12 ENSG00000178695 23035 0.872 0.872 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
7. PAX8 ENSG00000125618 1203 0.872 0.872 - paired box 8 [Source:HGNC Symbol;Acc:HGNC:8622]
8. C14orf105 594 0.869 0.869 - chromosome 14 open reading frame 105, transcript variant X5
9. HPN ENSG00000105707 604 0.863 0.863 - hepsin [Source:HGNC Symbol;Acc:HGNC:5155]
10. HOGA1 ENSG00000241935 221 0.857 0.857 - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
11. HNF1B ENSG00000275410, ENSG00000276194 214 0.853 0.853 - HNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]
12. ITM2B ENSG00000136156 52463 0.852 0.852 - integral membrane protein 2B [Source:HGNC Symbol;Acc:HGNC:6174]
13. CDH9 ENSG00000113100 257 0.85 0.850 - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
14. ANXA4 ENSG00000196975 1020 0.85 0.850 - annexin A4 [Source:HGNC Symbol;Acc:HGNC:542]
15. BMP4 ENSG00000125378 10639 0.846 0.846 - bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]
16. FLRT3 ENSG00000125848 10097 0.831 0.831 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
17. IGFBP7 ENSG00000163453 5320 0.83 0.830 - insulin like growth factor binding protein 7 [Source:HGNC Symbol;Acc:HGNC:5476]
18. ABCC6 ENSG00000091262, ENSG00000275331 384 0.829 0.829 - ATP binding cassette subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:57]
19. IFITM1 ENSG00000185885 954 0.828 0.828 - interferon induced transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:5412]
20. RIPK4 ENSG00000183421 163 0.828 0.828 - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
21. PTGR1 ENSG00000106853 4309 0.825 0.825 - prostaglandin reductase 1 [Source:HGNC Symbol;Acc:HGNC:18429]
22. AMN ENSG00000166126 95 0.825 0.825 - amnion associated transmembrane protein [Source:HGNC Symbol;Acc:HGNC:14604]
23. EPS8L2 ENSG00000177106 91 0.824 0.824 - EPS8 like 2 [Source:HGNC Symbol;Acc:HGNC:21296]
24. PCK1 ENSG00000124253 44 0.823 0.823 - phosphoenolpyruvate carboxykinase 1 [Source:HGNC Symbol;Acc:HGNC:8724]
25. AGT ENSG00000135744 990 0.82 0.820 - angiotensinogen [Source:HGNC Symbol;Acc:HGNC:333]
26. MST1L ENSG00000186715 614 0.819 0.819 - macrophage stimulating 1 like [Source:HGNC Symbol;Acc:HGNC:7390]
27. MAOB ENSG00000069535 1042 0.818 0.818 - monoamine oxidase B [Source:HGNC Symbol;Acc:HGNC:6834]
28. BMP3 ENSG00000152785 325 0.817 0.817 - bone morphogenetic protein 3 [Source:HGNC Symbol;Acc:HGNC:1070]
29. AFP ENSG00000081051 10786 0.817 0.817 - alpha fetoprotein [Source:HGNC Symbol;Acc:HGNC:317]
30. GRB7 ENSG00000141738 101 0.816 0.816 - growth factor receptor bound protein 7 [Source:HGNC Symbol;Acc:HGNC:4567]
31. GATA3 ENSG00000107485 2433 0.815 0.815 - GATA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:4172]
32. PRLR ENSG00000113494 93 0.812 0.812 - prolactin receptor [Source:HGNC Symbol;Acc:HGNC:9446]
33. MMP11 ENSG00000099953, ENSG00000275365 2049 0.812 0.812 - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
34. HAO2 ENSG00000116882 452 0.808 0.808 - hydroxyacid oxidase 2 [Source:HGNC Symbol;Acc:HGNC:4810]
35. CLDN3 ENSG00000165215 326 0.806 0.806 - claudin 3 [Source:HGNC Symbol;Acc:HGNC:2045]
36. FAM84B ENSG00000168672 5286 0.805 0.805 - family with sequence similarity 84 member B [Source:HGNC Symbol;Acc:HGNC:24166]
37. ADRB3 ENSG00000188778 204 0.805 0.805 - adrenoceptor beta 3 [Source:HGNC Symbol;Acc:HGNC:288]
38. HNF4A ENSG00000101076 107 0.804 0.804 - hepatocyte nuclear factor 4 alpha [Source:HGNC Symbol;Acc:HGNC:5024]
39. GATA3-AS1 ENSG00000197308 100 0.803 0.803 - GATA3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:33786]
40. KCNJ16 ENSG00000153822 608 0.803 0.803 - potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
41. CYS1 ENSG00000205795 292 0.802 0.802 - cystin 1 [Source:HGNC Symbol;Acc:HGNC:18525]
42. CD74 ENSG00000019582 1778 0.802 0.802 - CD74 molecule [Source:HGNC Symbol;Acc:HGNC:1697]
43. SLC39A4 ENSG00000147804, ENSG00000285243 1011 0.801 0.801 - solute carrier family 39 member 4 [Source:HGNC Symbol;Acc:HGNC:17129]
44. CUBN ENSG00000107611 354 0.799 0.799 - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
45. DCDC2 ENSG00000146038 407 0.799 0.799 - doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
46. PDZK1 ENSG00000174827 112 0.798 0.798 - PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:8821]
47. LHFPL3-AS2 ENSG00000225329 87 0.798 0.798 - LHFPL3 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:44106]
48. EPCAM ENSG00000119888 1090 0.798 0.798 - epithelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:11529]
49. DSP ENSG00000096696 5097 0.796 0.796 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
50. CPM ENSG00000135678 782 0.796 0.796 - carboxypeptidase M [Source:HGNC Symbol;Acc:HGNC:2311]
51. ANXA11 ENSG00000122359 3726 0.795 0.795 - annexin A11 [Source:HGNC Symbol;Acc:HGNC:535]
52. CLDN7 ENSG00000181885 191 0.793 0.793 - claudin 7 [Source:HGNC Symbol;Acc:HGNC:2049]
53. KRT8 ENSG00000170421 12050 0.793 0.793 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
54. HAND2 ENSG00000164107 5416 0.791 0.791 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
55. SLC9A3R1 ENSG00000109062 4036 0.791 0.791 - SLC9A3 regulator 1 [Source:HGNC Symbol;Acc:HGNC:11075]
56. ARHGAP24 ENSG00000138639 285 0.791 0.791 - Rho GTPase activating protein 24 [Source:HGNC Symbol;Acc:HGNC:25361]
57. SDC4 ENSG00000124145 1976 0.79 0.790 - syndecan 4 [Source:HGNC Symbol;Acc:HGNC:10661]
58. APOBEC3H ENSG00000100298 232 0.789 0.789 - apolipoprotein B mRNA editing enzyme catalytic subunit 3H [Source:HGNC Symbol;Acc:HGNC:24100]
59. SLC7A8 ENSG00000092068 345 0.787 0.787 - solute carrier family 7 member 8 [Source:HGNC Symbol;Acc:HGNC:11066]
60. STAT6 ENSG00000166888 2411 0.787 0.787 - signal transducer and activator of transcription 6 [Source:HGNC Symbol;Acc:HGNC:11368]
61. S100A11 ENSG00000163191 11475 0.785 0.785 - S100 calcium binding protein A11 [Source:HGNC Symbol;Acc:HGNC:10488]
62. KIAA1217 ENSG00000120549 3036 0.785 0.785 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
63. SLC39A5 ENSG00000139540 37 0.784 0.784 - solute carrier family 39 member 5 [Source:HGNC Symbol;Acc:HGNC:20502]
64. CLRN3 ENSG00000180745 65 0.784 0.784 - clarin 3 [Source:HGNC Symbol;Acc:HGNC:20795]
65. SPINT2 ENSG00000167642 25745 0.783 0.783 - serine peptidase inhibitor, Kunitz type 2 [Source:HGNC Symbol;Acc:HGNC:11247]
66. COBL ENSG00000106078 101 0.782 0.782 - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
67. SULT1E1 ENSG00000109193 282 0.782 0.782 - sulfotransferase family 1E member 1 [Source:HGNC Symbol;Acc:HGNC:11377]
68. CYP26B1 ENSG00000003137 1237 0.779 0.779 - cytochrome P450 family 26 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:20581]
69. FMO1 ENSG00000010932 81 0.779 0.779 - flavin containing monooxygenase 1 [Source:HGNC Symbol;Acc:HGNC:3769]
70. MITF ENSG00000187098 1018 0.778 0.778 - melanogenesis associated transcription factor [Source:HGNC Symbol;Acc:HGNC:7105]
71. LOC100507651 LOC100507651 32 0.778 0.778 -
72. NPC2 ENSG00000119655 5889 0.776 0.776 - NPC intracellular cholesterol transporter 2 [Source:HGNC Symbol;Acc:HGNC:14537]
73. DPYS ENSG00000147647 230 0.775 0.775 - dihydropyrimidinase [Source:HGNC Symbol;Acc:HGNC:3013]
74. PLAGL1 ENSG00000118495 6344 0.775 0.775 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
75. DEFB1 ENSG00000164825, ENSG00000284881 57 0.775 0.775 - defensin beta 1 [Source:HGNC Symbol;Acc:HGNC:2766]
76. CEBPD ENSG00000221869 280 0.774 0.774 - CCAAT enhancer binding protein delta [Source:HGNC Symbol;Acc:HGNC:1835]
77. CLEC18C ENSG00000157335 86 0.774 0.774 - C-type lectin domain family 18 member C [Source:HGNC Symbol;Acc:HGNC:28538]
78. ALDH1A1 ENSG00000165092 608 0.773 0.773 - aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]
79. TMEM52B ENSG00000165685 691 0.773 0.773 - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
80. SMIM24 ENSG00000095932 459 0.772 0.772 - small integral membrane protein 24 [Source:HGNC Symbol;Acc:HGNC:37244]
81. ALDH1A2 ENSG00000128918 11780 0.77 0.770 - aldehyde dehydrogenase 1 family member A2 [Source:HGNC Symbol;Acc:HGNC:15472]
82. KRT19 ENSG00000171345 1700 0.77 0.770 - keratin 19 [Source:HGNC Symbol;Acc:HGNC:6436]
83. COL1A1 ENSG00000108821 71290 0.77 0.770 - collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]
84. COL5A1 ENSG00000130635 11942 0.769 0.769 - collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]
85. COL6A1 ENSG00000142156 20649 0.768 0.768 - collagen type VI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2211]
86. CRYL1 ENSG00000165475 1422 0.768 0.768 - crystallin lambda 1 [Source:HGNC Symbol;Acc:HGNC:18246]
87. SCUBE3 ENSG00000146197 4847 0.768 0.768 - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
88. FREM2 ENSG00000150893 3376 0.767 0.767 - FRAS1 related extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:25396]
89. HOOK1 ENSG00000134709 873 0.765 0.765 - hook microtubule tethering protein 1 [Source:HGNC Symbol;Acc:HGNC:19884]
90. ANO9 ENSG00000185101 86 0.765 0.765 - anoctamin 9 [Source:HGNC Symbol;Acc:HGNC:20679]
91. BHMT ENSG00000145692 85 0.764 0.764 - betaine--homocysteine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:1047]
92. IFITM3 ENSG00000142089 57239 0.764 0.764 - interferon induced transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:5414]
93. NRXN3 ENSG00000021645 799 0.763 0.763 - neurexin 3 [Source:HGNC Symbol;Acc:HGNC:8010]
94. FTCD ENSG00000160282, ENSG00000281775 97 0.763 0.763 - formimidoyltransferase cyclodeaminase [Source:HGNC Symbol;Acc:HGNC:3974]
95. SVEP1 ENSG00000165124 1854 0.76 0.760 - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
96. PARD6B ENSG00000124171 972 0.76 0.760 - par-6 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:16245]
97. CLDN1 ENSG00000163347 595 0.76 0.760 - claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]
98. GYLTL1B 108 0.76 0.760 - glycosyltransferase-like 1B, transcript variant X2
99. LLGL2 ENSG00000073350 322 0.758 0.758 - LLGL2, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6629]
100. SLC34A1 ENSG00000131183 86 0.758 0.758 - solute carrier family 34 member 1 [Source:HGNC Symbol;Acc:HGNC:11019]

There are 74 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA