Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APOA1

Gene Name Gene ID Reads Annotation
APOA1 ENSGALG00000007114 10215 apolipoprotein A1 [Source:NCBI gene;Acc:396536]











Genes with expression patterns similar to APOA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. APOA1 ENSGALG00000007114 10215 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 apolipoprotein A1 [Source:NCBI gene;Acc:396536]
2. GATA5 ENSGALG00000005352 11876 2.443 - - 0.822 - - - - - 0.823 0.798 GATA binding protein 5 [Source:NCBI gene;Acc:396391]
3. CFC1 ENSGALG00000012623 3164 1.739 - - - - - - - - 0.892 0.847 cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
4. S100A11 ENSGALG00000036711 23454 1.635 - - - - 0.799 - - - 0.836 - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
5. ZFAND5 ENSGALG00000015144 9053 1.586 - - - - - - - - 0.735 0.851 zinc finger AN1-type containing 5 [Source:NCBI gene;Acc:427254]
6. HAPLN1 ENSGALG00000015627 14942 1.565 - - - - 0.774 - - - 0.791 - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
7. NR0B1 ENSGALG00000016287 481 1.564 - - - - - - - - 0.761 0.803 nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
8. KRT19 ENSGALG00000019719 38711 1.552 - - - - - - - 0.756 0.796 - keratin 19 [Source:NCBI gene;Acc:395861]
9. COL18A1 ENSGALG00000038311 11934 1.549 - - 0.737 - - - - - 0.812 - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
10. GCHFR ENSGALG00000032239 1608 1.487 - - - - - - - - 0.745 0.742 GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
11. SPON1 ENSGALG00000038775 16503 1.479 - - - - - 0.722 0.757 - - - spondin 1 [Source:NCBI gene;Acc:395657]
12. ENSGALG00000011687 ENSGALG00000011687 4553 1.475 - - 0.726 - - - - - 0.749 -
13. MYL9 ENSGALG00000028567 36256 1.452 - - 0.741 - 0.711 - - - - - myosin, light chain 9, regulatory [Source:NCBI gene;Acc:396215]
14. SLC7A9 ENSGALG00000021158 1737 0.959 - - - - - - - 0.959 - - solute carrier family 7 member 9 [Source:NCBI gene;Acc:415768]
15. ENPP6 ENSGALG00000010645 272 0.953 - - - - - - - 0.953 - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:HGNC:23409]
16. TBX18 ENSGALG00000032789 1768 0.917 - - - - - - - - - 0.917 T-box 18 [Source:NCBI gene;Acc:395104]
17. S100A10 ENSGALG00000028774 8695 0.914 - - - - - - - 0.914 - - S100 calcium binding protein A10 [Source:NCBI gene;Acc:396506]
18. TTR ENSGALG00000015143 9764 0.912 - - - - - - - 0.912 - - transthyretin [Source:NCBI gene;Acc:396277]
19. CO6 CO6 1623 0.908 - - - - - - - 0.908 - -
20. ANGPTL3 ENSGALG00000010978 335 0.901 - - - - - - - 0.901 - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
21. OLFML2A ENSGALG00000001048 1329 0.897 - - - - - - - 0.897 - - olfactomedin like 2A [Source:HGNC Symbol;Acc:HGNC:27270]
22. CIDEC ENSGALG00000026945 718 0.895 - - - - - - - - - 0.895 cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
23. TGFB2 ENSGALG00000009612 10223 0.891 - - - - - - - - 0.891 - transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
24. WBSCR27 3511 0.889 - - - - - - - 0.889 - - Williams Beuren syndrome chromosome region 27
25. BMPER ENSGALG00000029811 636 0.881 - - - - - - - - - 0.881 BMP binding endothelial regulator [Source:NCBI gene;Acc:420744]
26. PLD1 ENSGALG00000009252 2331 0.879 - - - - - - - 0.879 - - phospholipase D1, transcript variant X5
27. PRKX ENSGALG00000042759 2418 0.873 - - - - - - - 0.873 - - protein kinase X-linked [Source:HGNC Symbol;Acc:HGNC:9441]
28. LGALS3 ENSGALG00000012173 3306 0.873 - - - - - - - 0.873 - - galectin 3 [Source:NCBI gene;Acc:373917]
29. MRVI1 ENSGALG00000005632 450 0.871 - - - - - - - 0.871 - - murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
30. GPX3 ENSGALG00000004521 10856 0.864 - - - - - - - 0.864 - - glutathione peroxidase 3 [Source:NCBI gene;Acc:427638]
31. COL4A5 ENSGALG00000008141 15874 0.855 - - - - - - - - 0.855 - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
32. PCCB ENSGALG00000037238 1536 0.854 - - - - - - - 0.854 - - propionyl-CoA carboxylase subunit beta [Source:HGNC Symbol;Acc:HGNC:8654]
33. SATB1 ENSGALG00000011254 1377 0.851 - - - - - - - 0.851 - - SATB homeobox 1 [Source:NCBI gene;Acc:420647]
34. IKZF5 ENSGALG00000032289 993 0.849 - - - - - - - 0.849 - - IKAROS family zinc finger 5 [Source:NCBI gene;Acc:430882]
35. PRRX1 ENSGALG00000003324 4859 0.848 - - 0.848 - - - - - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
36. TMEM214 ENSGALG00000022850 7943 0.848 - - - - - - - 0.848 - - transmembrane protein 214 [Source:HGNC Symbol;Acc:HGNC:25983]
37. NAT ENSGALG00000005472 662 0.844 - - - - - - - 0.844 - - N-acetyltransferase, liver isozyme [Source:NCBI gene;Acc:396537]
38. RBBP6 ENSGALG00000006043 9708 0.843 - - - - - - - - 0.843 - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
39. GREB1 ENSGALG00000016455 12794 0.842 - - - - - - - - 0.842 - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
40. CGT CGT 948 0.829 - - - - - - - 0.829 - -
41. GJB6 ENSGALG00000017136 500 0.828 - - - - - - - 0.828 - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
42. MYO1B ENSGALG00000007712 8755 0.825 - - - - - - - - 0.825 - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
43. SULT1C SULT1C 118 0.824 - - - 0.824 - - - - - -
44. MAPKKK3L ENSGALG00000005884 1011 0.824 - - - - - - - 0.824 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
45. CEP170 ENSGALG00000010733 4177 0.823 - - - - - - - - 0.823 - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
46. MASP1 ENSGALG00000007419 141 0.818 - - - 0.818 - - - - - - mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
47. MSRB1 ENSGALG00000005414 4197 0.815 - - - - - - - 0.815 - - methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
48. ANXA1 ENSGALG00000015148 13804 0.814 - - - - - - - - - 0.814 annexin A1 [Source:NCBI gene;Acc:404271]
49. CMTM7 ENSGALG00000011488 1406 0.813 - - - - - - - - 0.813 - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
50. TCIRG1 ENSGALG00000036069 1117 0.812 - - - - - - - 0.812 - - T-cell immune regulator 1, ATPase H+ transporting V0 subunit a3 [Source:NCBI gene;Acc:395472]
51. FA2H ENSGALG00000002775 396 0.811 - - - - - - - 0.811 - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
52. BCAS1 ENSGALG00000007796 379 0.808 - - - - - - - 0.808 - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
53. MPZL3 ENSGALG00000021271 1857 0.806 - - - - - - - 0.806 - - myelin protein zero like 3 [Source:NCBI gene;Acc:419778]
54. GALNT7 ENSGALG00000010744 8645 0.804 - - 0.804 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4129]
55. WBP1L ENSGALG00000041010 3681 0.803 - - - - - - - 0.803 - - WW domain binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:23510]
56. A1CF ENSGALG00000003765 36 0.794 - - - 0.794 - - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
57. ATP6V1G3 ENSGALG00000002207 151 0.794 - - - - - - - - - 0.794 ATPase H+ transporting V1 subunit G3 [Source:HGNC Symbol;Acc:HGNC:18265]
58. GPC4 ENSGALG00000006080 56498 0.793 - - - - - 0.793 - - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
59. MT-ND3 MT-ND3 510729 0.787 - - - - - - - - 0.787 -
60. MYH9 ENSGALG00000043092 3026 0.786 - - - - - - - - 0.786 - myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:396469]
61. ISCA2 ENSGALG00000020417 1130 0.783 - - - - - - - 0.783 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
62. TMOD1 ENSGALG00000002125 933 0.783 - - - - - - - - 0.783 - tropomodulin 1 [Source:NCBI gene;Acc:395883]
63. CUX2 ENSGALG00000004598 231 0.783 - - - - - - - - - 0.783 cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]
64. CL2 ENSGALG00000011455 87 0.78 - - - 0.780 - - - - - - liver ribonuclease A [Source:NCBI gene;Acc:422633]
65. C1QTNF6 ENSGALG00000027067 493 0.78 - - - - - - - - - 0.780 C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
66. TMEFF2 ENSGALG00000007759 93 0.778 - - - 0.778 - - - - - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
67. LDHA ENSGALG00000006300 4796 0.778 - - - - - - - 0.778 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
68. FBN2 ENSGALG00000014686 4538 0.777 - - - - - - - - 0.777 - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
69. DGUOK ENSGALG00000005961 5929 0.776 - - - - - - - 0.776 - - deoxyguanosine kinase [Source:NCBI gene;Acc:770922]
70. RBP4 ENSGALG00000015374 122 0.775 - - - 0.775 - - - - - - retinol binding protein 4 [Source:NCBI gene;Acc:396454]
71. SNORA73 SNORA73 1644 0.772 - - - - - - - - 0.772 -
72. BAMBI ENSGALG00000040993 7562 0.771 - - - - - - - - - 0.771 BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
73. SIGIRR ENSGALG00000004267 72 0.769 - - - 0.769 - - - - - - single Ig and TIR domain containing [Source:NCBI gene;Acc:422995]
74. DHRS3 ENSGALG00000030376 6422 0.765 - - - - - - - - 0.765 - dehydrogenase/reductase 3 [Source:NCBI gene;Acc:419480]
75. GUCA2A ENSGALG00000027269 4340 0.764 - - - - - - - 0.764 - - guanylate cyclase activator 2A [Source:NCBI gene;Acc:419498]
76. SLIT3 ENSGALG00000001916 738 0.764 - - - - - - - - 0.764 - slit guidance ligand 3 [Source:NCBI gene;Acc:374173]
77. TWIST1 ENSGALG00000041640 1176 0.764 - - - - - 0.764 - - - - twist family bHLH transcription factor 1 [Source:NCBI gene;Acc:395491]
78. FGA ENSGALG00000009266 291 0.763 - - - 0.763 - - - - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
79. BOC ENSGALG00000015152 4868 0.762 - - 0.762 - - - - - - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
80. COL6A1 ENSGALG00000005974 1991 0.761 - - - - - - - 0.761 - - collagen type VI alpha 1 chain [Source:NCBI gene;Acc:396000]
81. SNAI2 ENSGALG00000030902 8201 0.761 - - - - - - - - 0.761 - snail family transcriptional repressor 2
82. MBSP MBSP 5634 0.76 - - - - - - - - 0.760 -
83. ENSGALG00000023485 ENSGALG00000023485 46 0.759 - - - 0.759 - - - - - -
84. GGA.1330 GGA.1330 11281 0.759 - - - - - - - - 0.759 -
85. TSPAN8 ENSGALG00000010152 2666 0.759 - - - - - - - 0.759 - - tetraspanin 8 [Source:NCBI gene;Acc:417854]
86. BMP-10 BMP-10 22 0.758 - - - 0.758 - - - - - -
87. TOR1A ENSGALG00000004165 4487 0.758 - - - - - - - 0.758 - - torsin family 1 member A [Source:NCBI gene;Acc:417190]
88. ZYX ENSGALG00000014688 8686 0.758 - - - - - - - 0.758 - - zyxin [Source:NCBI gene;Acc:418300]
89. SMARCA1 ENSGALG00000008431 4000 0.758 - - - - - - - 0.758 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]
90. ENSGALG00000023180 ENSGALG00000023180 83 0.758 - - - 0.758 - - - - - -
91. SOX9 ENSGALG00000004386 14802 0.757 - - - - - - 0.757 - - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
92. UGT1A1 ENSGALG00000004196 30 0.757 - - - 0.757 - - - - - - UDP glucuronosyltransferase family 1 member A1, transcript variant X1
93. MANBA ENSGALG00000012308 84 0.756 - - - 0.756 - - - - - - mannosidase beta [Source:HGNC Symbol;Acc:HGNC:6831]
94. GDPD5 ENSGALG00000034967 1983 0.755 - - - - - 0.755 - - - - glycerophosphodiester phosphodiesterase domain containing 5 [Source:NCBI gene;Acc:419070]
95. NTS ENSGALG00000027192 669 0.755 - - - 0.755 - - - - - - neurotensin [Source:NCBI gene;Acc:417883]
96. LGALS2 ENSGALG00000003213 1089 0.754 - - - - - - - 0.754 - - galectin 2, transcript variant X2
97. LPIN1 ENSGALG00000016456 1044 0.754 - - - - - - - 0.754 - - lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]
98. KANK1 ENSGALG00000010158 3780 0.754 - - - - - - - 0.754 - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
99. MDK ENSGALG00000008367 316136 0.751 - - 0.751 - - - - - - - midkine [Source:NCBI gene;Acc:423196]
100. CDH17 ENSGALG00000035094 521 0.751 - - - - - - - 0.751 - - cadherin 17 [Source:NCBI gene;Acc:420225]

There are 97 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA