Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for APH1A

Gene Name Gene ID Reads Annotation
APH1A ENSGALG00000045163 146 aph-1 homolog A, gamma-secretase subunit [Source:HGNC Symbol;Acc:HGNC:29509]











Genes with expression patterns similar to APH1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. APH1A ENSGALG00000045163 146 4 - 1.000 1.000 - - 1.000 - - - 1.000 aph-1 homolog A, gamma-secretase subunit [Source:HGNC Symbol;Acc:HGNC:29509]
2. EML5 ENSGALG00000010639 25 0.925 - - 0.925 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
3. ATXN3 ENSGALG00000010766 48 0.924 - - 0.924 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
4. PRC1 ENSGALG00000012836 20 0.923 - - 0.923 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
5. AHR2 ENSGALG00000023742 21 0.923 - - 0.923 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
6. FAM3B ENSGALG00000016140 111 0.922 - - 0.922 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
7. TBC1D8B ENSGALG00000009040 75 0.921 - - 0.921 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
8. DFFB ENSGALG00000036295 88 0.92 - - 0.920 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
9. LLGL1 ENSGALG00000014408 15 0.92 - - 0.920 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
10. C15orf60 C15orf60 16 0.919 - - 0.919 - - - - - - -
11. BMP2K ENSGALG00000010885 37 0.919 - - 0.919 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
12. GALNT11 ENSGALG00000006233 210 0.919 - - 0.919 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
13. OTOA ENSGALG00000007070 94 0.916 - - 0.916 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
14. DNALI1 ENSGALG00000001996 64 0.915 - - 0.915 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
15. EPHA1 ENSGALG00000014687 174 0.912 - - 0.912 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
16. DLX6 ENSGALG00000023195 29 0.912 - - 0.912 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
17. FSCN2 ENSGALG00000023354 13 0.911 - - 0.911 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
18. CNKSR1 ENSGALG00000046299 195 0.91 - - 0.910 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:HGNC:19700]
19. PIP5K1C ENSGALG00000000784 492 0.909 - - 0.909 - - - - - - - Gallus gallus phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNA. [Source:RefSeq mRNA;Acc:NM_001319021]
20. KPNA5 ENSGALG00000014937 28 0.909 - - 0.909 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
21. PHTF2 ENSGALG00000008335 722 0.908 - - 0.908 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
22. SCNM1 ENSGALG00000046607 665 0.905 - - 0.905 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
23. TOX3 ENSGALG00000034649 54 0.903 - - 0.903 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
24. FAM199X ENSGALG00000008872 44 0.903 - - 0.903 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
25. ZZEF1 ENSGALG00000001546 767 0.903 - - 0.903 - - - - - - - zinc finger ZZ-type and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29027]
26. ENSGALG00000005723 ENSGALG00000005723 36 0.903 - - 0.903 - - - - - - -
27. ENSGALG00000028778 ENSGALG00000028778 47 0.902 - - 0.902 - - - - - - -
28. RAB11FIP1 41 0.901 - - 0.901 - - - - - - - RAB11 family interacting protein 1, transcript variant X2
29. PDZK1IP1 ENSGALG00000010473 551 0.901 - - 0.901 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
30. NHLRC2 ENSGALG00000008946 387 0.899 - - 0.899 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
31. ALKBH8 ENSGALG00000017170 699 0.896 - - 0.896 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
32. PRDM10 632 0.896 - - 0.896 - - - - - - - PR domain 10, transcript variant X10
33. FAM46A ENSGALG00000035903 891 0.896 - - 0.896 - - - - - - - family with sequence similarity 46 member A [Source:NCBI gene;Acc:421845]
34. CREB3 ENSGALG00000002523 23 0.895 - - 0.895 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
35. DIXDC1 ENSGALG00000007929 67 0.894 - - 0.894 - - - - - - - DIX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23695]
36. FANCB ENSGALG00000016569 1193 0.893 - - 0.893 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
37. FMN2 ENSGALG00000031427 77 0.892 - - 0.892 - - - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
38. SEC22C ENSGALG00000005268 1151 0.891 - - 0.891 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
39. CD300A CD300A 173 0.887 - - 0.887 - - - - - - -
40. PRKCE ENSGALG00000010000 99 0.887 - - 0.887 - - - - - - - protein kinase C epsilon, transcript variant X1
41. PLXNB2 ENSGALG00000039861 338 0.887 - - 0.887 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
42. PKD2 ENSGALG00000010921 55 0.886 - - 0.886 - - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
43. CCDC135 CCDC135 220 0.882 - - 0.882 - - - - - - -
44. ACSF3 ENSGALG00000035225 261 0.88 - - 0.880 - - - - - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
45. SCN5A ENSGALG00000006112 137 0.88 - - 0.880 - - - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
46. MIS12 ENSGALG00000001632 372 0.88 - - 0.880 - - - - - - - MIS12, kinetochore complex component [Source:NCBI gene;Acc:693254]
47. TMEM132B ENSGALG00000002742 122 0.868 - - 0.868 - - - - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
48. RIPK4 ENSGALG00000040189 102 0.868 - - 0.868 - - - - - - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
49. ZC4H2 ENSGALG00000042725 361 0.866 - - 0.866 - - - - - - - zinc finger C4H2-type containing, transcript variant X4
50. DVL3 ENSGALG00000008414 38 0.865 - - 0.865 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
51. NUDT4 ENSGALG00000011285 2998 0.865 - - 0.865 - - - - - - - nudix hydrolase 4, transcript variant X5
52. CD82 ENSGALG00000038217 1266 0.864 - - 0.864 - - - - - - - CD82 molecule [Source:NCBI gene;Acc:423172]
53. ENSGALG00000011942 ENSGALG00000011942 175 0.864 - - 0.864 - - - - - - -
54. KIDINS220 ENSGALG00000016409 854 0.863 - - 0.863 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
55. ECHDC2 ENSGALG00000010647 4413 0.853 - - 0.853 - - - - - - - enoyl-CoA hydratase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23408]
56. VTI1B ENSGALG00000009526 133 0.853 - - 0.853 - - - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
57. gga-mir-6561 ENSGALG00000026650 135 0.852 - - 0.852 - - - - - - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
58. KLF6 ENSGALG00000033178 679 0.852 - - 0.852 - - - - - - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
59. VWDE ENSGALG00000042443 160 0.851 - - 0.851 - - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
60. RMDN3 ENSGALG00000035242 680 0.85 - - 0.850 - - - - - - - regulator of microtubule dynamics 3 [Source:HGNC Symbol;Acc:HGNC:25550]
61. ENSGALG00000004127 ENSGALG00000004127 566 0.847 - - 0.847 - - - - - - -
62. GABRA1 ENSGALG00000001698 120 0.847 - - 0.847 - - - - - - - gamma-aminobutyric acid type A receptor alpha1 subunit [Source:NCBI gene;Acc:374214]
63. C1H11ORF70 ENSGALG00000017189 395 0.835 - - 0.835 - - - - - - - chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
64. VPS53 ENSGALG00000042071 1158 0.833 - - 0.833 - - - - - - - VPS53, GARP complex subunit [Source:NCBI gene;Acc:417622]
65. ANO5 ENSGALG00000003748 3959 0.832 - - 0.832 - - - - - - - anoctamin 5 [Source:NCBI gene;Acc:422973]
66. ENSGALG00000026925 ENSGALG00000026925 119 0.831 - - 0.831 - - - - - - -
67. CPSF2 ENSGALG00000010783 5236 0.829 - - 0.829 - - - - - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
68. ABCC1 ENSGALG00000006646 2596 0.828 - - 0.828 - - - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
69. STXBP1 ENSGALG00000040003 157 0.825 - - 0.825 - - - - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
70. CLEC3B ENSGALG00000030969 363 0.816 - - 0.816 - - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
71. NUBPL ENSGALG00000009983 3328 0.815 - - 0.815 - - - - - - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
72. WDR5 ENSGALG00000002659 13008 0.814 - - 0.814 - - - - - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
73. RGS12 ENSGALG00000015626 280 0.812 - - 0.812 - - - - - - - regulator of G protein signaling 12 [Source:HGNC Symbol;Acc:HGNC:9994]
74. UBAP2L ENSGALG00000024094 853 0.809 - - 0.809 - - - - - - - ubiquitin associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:29877]
75. FRG1 ENSGALG00000013590 2590 0.807 - - 0.807 - - - - - - - FSHD region gene 1
76. CCDC51 ENSGALG00000006465 1845 0.805 - - 0.805 - - - - - - - coiled-coil domain containing 51, transcript variant X1
77. C3H6ORF203 ENSGALG00000015316 513 0.805 - - 0.805 - - - - - - - chromosome 3 open reading frame, human C6orf203 [Source:NCBI gene;Acc:421779]
78. THNSL1 ENSGALG00000007677 287 0.804 - - 0.804 - - - - - - - threonine synthase like 1 [Source:HGNC Symbol;Acc:HGNC:26160]
79. HKDC1 ENSGALG00000021039 134 0.802 - - 0.802 - - - - - - - hexokinase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23302]
80. SNED1 ENSGALG00000043596 693 0.8 - - 0.800 - - - - - - - sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]
81. BRWD3 ENSGALG00000007151 3495 0.798 - - 0.798 - - - - - - - bromodomain and WD repeat domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17342]
82. MST1 ENSGALG00000002722 994 0.797 - - 0.797 - - - - - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
83. MST4 MST4 1931 0.797 - - 0.797 - - - - - - -
84. SH2D4A ENSGALG00000010122 206 0.797 - - 0.797 - - - - - - - SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
85. CDH1 ENSGALG00000000608 6156 0.797 - - 0.797 - - - - - - - cadherin 3 [Source:NCBI gene;Acc:414845]
86. HERC1 ENSGALG00000003381 672 0.795 - - 0.795 - - - - - - - HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X8
87. RCAN1 ENSGALG00000016014 95 0.795 - - 0.795 - - - - - - - regulator of calcineurin 1 [Source:NCBI gene;Acc:418510]
88. BECN1 ENSGALG00000002973 1569 0.794 - - 0.794 - - - - - - - beclin 1 [Source:NCBI gene;Acc:420018]
89. TEX264 ENSGALG00000003832 3053 0.793 - - 0.793 - - - - - - - testis expressed 264 [Source:NCBI gene;Acc:415938]
90. PRMT10 PRMT10 1169 0.792 - - 0.792 - - - - - - -
91. HPS3 ENSGALG00000040089 44 0.791 - - 0.791 - - - - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
92. MTMR14 ENSGALG00000006601 1435 0.791 - - 0.791 - - - - - - - myotubularin related protein 14 [Source:NCBI gene;Acc:416048]
93. FUCA1 ENSGALG00000004112 2154 0.787 - - 0.787 - - - - - - - alpha-L-fucosidase 1 [Source:HGNC Symbol;Acc:HGNC:4006]
94. TRMT12 ENSGALG00000006773 707 0.786 - - 0.786 - - - - - - - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
95. CDKN2AIP ENSGALG00000010661 1218 0.785 - - 0.785 - - - - - - - CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
96. CNP1 ENSGALG00000028638 56 0.784 - - 0.784 - - - - - - - C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
97. RNF8 ENSGALG00000023256 5495 0.781 - - 0.781 - - - - - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
98. CDC73 ENSGALG00000002469 4586 0.779 - - 0.779 - - - - - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
99. CCBE1 ENSGALG00000027785 295 0.778 - - 0.778 - - - - - - - collagen and calcium binding EGF domains 1 [Source:HGNC Symbol;Acc:HGNC:29426]
100. PYGO1 ENSGALG00000004369 527 0.776 - - 0.776 - - - - - - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]

There are 82 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA